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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0310800 |
| Transcript ID | LotjaGi6g1v0310800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like protein kinase family protein; TAIR: AT2G42800.1 receptor like protein 29; Swiss-Prot: sp|Q5PP26|PII2_ARATH Piriformospora indica-insensitive protein 2; TrEMBL-Plants: tr|K7MAI2|K7MAI2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0310800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:62950843..62953020) extracted from Lotus japonicus Gifu genome v1.2.
CCCAACTGAAATATTTTTCTGGTAGAACAAGCAGGGTAATAGTTCATTTCAAACTCTATACTTTGGTTGGGATTTGAAGT GAGAAAGAATGTATGTCTGTGTTATCACACACCCCTGCATGTGTCCATTACATTGTCCCAGGCACACAGTCATGTCTTAT CAATACCACATTTATCTGAAACAACCATTAAACTGTTCTGGAAATGTACATTGCCTCTTTTAGTAACCCATTTGTCTTTC TCCAACTCACTACCCTTTTCCATGCAAACTACCACAGTCCTACTCACATTTGCAGCTCAAAGGCGACAGTTTTGTATTTT TCTTTGTTGCAGCAGCCTTCACTGCTGACACAAAAAGATGAGACTATTGCAATTTACCTTTCAATTCTTCTCATTTGCCA TCAACTCAATTCAAGAAAAAACCTTATATTCAGAAACTGGATCTTGCCCTTTTCAATTGCCTTTCAAACCAACCATTATT GTTGCTGTTTTATTTTTTCAGTTCACTCAGGCATTTGTCAAATGGCTAGTGTACCTTTTCTCCTTGTTGTGTTCCTCTTG TTTGCAGGTGAAATGGTGGCAGTAATGGAAGAGAAGGAGTTGTTGGGATTGTTTGAAGTGATGGATGCTCTTGTGGATGA CCCTGACTGGGCCCAATCACACCCTCAGCCTTGTACTGATACTCCATGGCCTGGAGTTGAGTGTGAAGTTAGCAGTGACT ACCCACCAATCTTTCATGTCACAAAGATCCACATTGGTCCTGAAATACTCTCCCCACCTTGCAAATCCTCTGCTCACCTA TCACAATCCTTGCTGAAACTCAGTTACTTGAAAACCTTTTCAATTTTCAACTGTTTTGTTGCTTCACCAGTCACTCTACC TACAACTCTCTTTGGTCCTTTCTCTTCCTTAGAGCACCTTGCTCTGCAGTCTAACCCATCACTCCATGGAACAATACCTC CAAGTTTGGGCCATGTGACTAATCTCAGAGTCTTGAGCCTGTCCCAGAACAGCTTACAAGGAAACATCCCAAAACAGATT GGAAATTTGGCTAGTCTAGAGCAACTTGACCTGAGTTATAACAATCTCAGTGGTGAAATCCCCAAGGAAATCGGAGGTTT GAAAAGCATGACCATTTTGGACCTAAGCTGGAATCAAATTGAAGGGAATCTTCCTTATTCTGTTGGAGAACTCCAACTTC TCCAGAAGATGGATTTGAGCTCAAACAGGATTTCAGGTAAAATACCTCCAGAACTTGGAAAACTCAAGAGGTTAGTCTTA CTTGATCTGAGTCACAACTTTATTGGTGGTCCTGTTCCTGAAACATTTTCAAGTTTGGAGAATCTAGAATATTTTCTCAT TGATGACAACCCCATCAAAGCAGGGGTACCCCCCTTCATAGGGAACCTTTGGAAGCTCAAATCAGTGAGCTTATCAGGTT GTGGATTGGTTGGTTCCATTCCCAATTCTTTATCTTCCTTGGAGAACCTCACAGCTCTCTCCCTAGATAACAATAGCCTC AATGGGTCAGTTCCTCCAAATCTTGGTTTTCTTCCGAACTTAGATCAACTGAACATCAGCCACAACAAGCTGAATGGGAT TCTTGAGCTCCCTGATGAGTTCATTGGAAAGCTTGGTAAAAGGCTGGATGTAAGAGGAAACAGTGACCTTTGCATCAGTG ATGTGACAAACAAGAAGAACCTCTCTTCATACTTGGAAATCCCCTCCTGTAGAAATGACAAATCTTTAACTGAAGGTCCA CCTGAAGATCCAGCAGGAATATTAAAGCCATCTTGGATTAAAAGCAACATGAGTTCAAGTTCATCAAGAATGGATCTAAT ACTTATCCTGTTCAACTTGGTTTTTAGTTTCATCCTCATTTTCCTTAATTTGATTTTGTGAATCTGGGAACTTTTATTTT CATAAAATGCTTAAGTTAAATCTCATTGAAATGAAGTGCATTCATAGGCAATGTTGTTGACTTGTTGTTGGTGATGATGC CAATGGAAATTATTATTCATATAAAATTCCATGCACTAGTCAAATGTTTGGTGCAGATGATTAGTGACTTCAATTAATAG GTTCTGCATTTTGCATGGCACGGTGAAAGAAAATAATTCATGTTTGGAGTTTTGTATTTGATTTTTGTATGTTTTAGGAA AAGCTGGGTCACTACTCC
CDS sequence (LotjaGi6g1v0310800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTACATTGCCTCTTTTAGTAACCCATTTGTCTTTCTCCAACTCACTACCCTTTTCCATGCAAACTACCACAGTCCTAC TCACATTTGCAGCTCAAAGGCGACAGTTTTGTATTTTTCTTTGTTGCAGCAGCCTTCACTGCTGACACAAAAAGATGAGA CTATTGCAATTTACCTTTCAATTCTTCTCATTTGCCATCAACTCAATTCAAGAAAAAACCTTATATTCAGAAACTGGATC TTGCCCTTTTCAATTGCCTTTCAAACCAACCATTATTGTTGCTGTTTTATTTTTTCAGTTCACTCAGGCATTTGTCAAAT GGCTAGTGTACCTTTTCTCCTTGTTGTGTTCCTCTTGTTTGCAGGTGAAATGGTGGCAGTAATGGAAGAGAAGGAGTTGT TGGGATTGTTTGAAGTGATGGATGCTCTTGTGGATGACCCTGACTGGGCCCAATCACACCCTCAGCCTTGTACTGATACT CCATGGCCTGGAGTTGAGTGTGAAGTTAGCAGTGACTACCCACCAATCTTTCATGTCACAAAGATCCACATTGGTCCTGA AATACTCTCCCCACCTTGCAAATCCTCTGCTCACCTATCACAATCCTTGCTGAAACTCAGTTACTTGAAAACCTTTTCAA TTTTCAACTGTTTTGTTGCTTCACCAGTCACTCTACCTACAACTCTCTTTGGTCCTTTCTCTTCCTTAGAGCACCTTGCT CTGCAGTCTAACCCATCACTCCATGGAACAATACCTCCAAGTTTGGGCCATGTGACTAATCTCAGAGTCTTGAGCCTGTC CCAGAACAGCTTACAAGGAAACATCCCAAAACAGATTGGAAATTTGGCTAGTCTAGAGCAACTTGACCTGAGTTATAACA ATCTCAGTGGTGAAATCCCCAAGGAAATCGGAGGTTTGAAAAGCATGACCATTTTGGACCTAAGCTGGAATCAAATTGAA GGGAATCTTCCTTATTCTGTTGGAGAACTCCAACTTCTCCAGAAGATGGATTTGAGCTCAAACAGGATTTCAGGTAAAAT ACCTCCAGAACTTGGAAAACTCAAGAGGTTAGTCTTACTTGATCTGAGTCACAACTTTATTGGTGGTCCTGTTCCTGAAA CATTTTCAAGTTTGGAGAATCTAGAATATTTTCTCATTGATGACAACCCCATCAAAGCAGGGGTACCCCCCTTCATAGGG AACCTTTGGAAGCTCAAATCAGTGAGCTTATCAGGTTGTGGATTGGTTGGTTCCATTCCCAATTCTTTATCTTCCTTGGA GAACCTCACAGCTCTCTCCCTAGATAACAATAGCCTCAATGGGTCAGTTCCTCCAAATCTTGGTTTTCTTCCGAACTTAG ATCAACTGAACATCAGCCACAACAAGCTGAATGGGATTCTTGAGCTCCCTGATGAGTTCATTGGAAAGCTTGGTAAAAGG CTGGATGTAAGAGGAAACAGTGACCTTTGCATCAGTGATGTGACAAACAAGAAGAACCTCTCTTCATACTTGGAAATCCC CTCCTGTAGAAATGACAAATCTTTAACTGAAGGTCCACCTGAAGATCCAGCAGGAATATTAAAGCCATCTTGGATTAAAA GCAACATGAGTTCAAGTTCATCAAGAATGGATCTAATACTTATCCTGTTCAACTTGGTTTTTAGTTTCATCCTCATTTTC CTTAATTTGATTTTGTGA
Protein sequence (LotjaGi6g1v0310800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYIASFSNPFVFLQLTTLFHANYHSPTHICSSKATVLYFSLLQQPSLLTQKDETIAIYLSILLICHQLNSRKNLIFRNWI LPFSIAFQTNHYCCCFIFSVHSGICQMASVPFLLVVFLLFAGEMVAVMEEKELLGLFEVMDALVDDPDWAQSHPQPCTDT PWPGVECEVSSDYPPIFHVTKIHIGPEILSPPCKSSAHLSQSLLKLSYLKTFSIFNCFVASPVTLPTTLFGPFSSLEHLA LQSNPSLHGTIPPSLGHVTNLRVLSLSQNSLQGNIPKQIGNLASLEQLDLSYNNLSGEIPKEIGGLKSMTILDLSWNQIE GNLPYSVGELQLLQKMDLSSNRISGKIPPELGKLKRLVLLDLSHNFIGGPVPETFSSLENLEYFLIDDNPIKAGVPPFIG NLWKLKSVSLSGCGLVGSIPNSLSSLENLTALSLDNNSLNGSVPPNLGFLPNLDQLNISHNKLNGILELPDEFIGKLGKR LDVRGNSDLCISDVTNKKNLSSYLEIPSCRNDKSLTEGPPEDPAGILKPSWIKSNMSSSSSRMDLILILFNLVFSFILIF LNLIL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 78 | 78 | - | – | |
| Phobius | 79 | 101 | 23 | - | – | |
| TMHMM | 79 | 101 | 23 | - | – | |
| Phobius | 102 | 106 | 5 | - | – | |
| Phobius | 107 | 127 | 21 | - | – | |
| TMHMM | 108 | 127 | 20 | - | – | |
| Gene3D | 126 | 298 | 173 | 2.2E-31 | ||
| Phobius | 128 | 544 | 417 | - | – | |
| PANTHER | 133 | 533 | 401 | 3.8E-173 | – | |
| PANTHER | 133 | 533 | 401 | 3.8E-173 | – | |
| SUPERFAMILY | 193 | 490 | 298 | 5.78E-61 | – | |
| SMART | 258 | 281 | 24 | 190.0 | ||
| SMART | 258 | 284 | 27 | 24.0 | – | |
| Pfam | 259 | 319 | 61 | 8.1E-11 | ||
| ProSiteProfiles | 260 | 282 | 23 | 6.01 | ||
| SMART | 282 | 306 | 25 | 5.6 | ||
| ProSiteProfiles | 284 | 307 | 24 | 6.688 | ||
| PRINTS | 285 | 298 | 14 | 7.4E-6 | – | |
| Gene3D | 299 | 395 | 97 | 6.7E-30 | ||
| SMART | 306 | 321 | 16 | 190.0 | – | |
| ProSiteProfiles | 308 | 330 | 23 | 5.086 | ||
| SMART | 330 | 354 | 25 | 44.0 | ||
| ProSiteProfiles | 332 | 355 | 24 | 5.964 | ||
| Pfam | 333 | 391 | 59 | 8.0E-8 | ||
| SMART | 354 | 383 | 30 | 5.0 | – | |
| ProSiteProfiles | 356 | 377 | 22 | 5.356 | ||
| Gene3D | 396 | 504 | 109 | 4.4E-18 | ||
| Pfam | 404 | 426 | 23 | 0.99 | ||
| SMART | 426 | 448 | 23 | 280.0 | ||
| ProSiteProfiles | 428 | 451 | 24 | 5.941 | ||
| PRINTS | 450 | 463 | 14 | 7.4E-6 | – | |
| SMART | 450 | 475 | 26 | 80.0 | ||
| ProSiteProfiles | 452 | 473 | 22 | 7.027 | ||
| Phobius | 545 | 564 | 20 | - | – | |
| TMHMM | 545 | 564 | 20 | - | – | |
| Phobius | 565 | 565 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0310800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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