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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0320500 |
| Transcript ID | LotjaGi6g1v0320500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like protein kinase family; TAIR: AT4G18760.1 receptor like protein 51; Swiss-Prot: sp|Q9SN38|RLP51_ARATH Receptor-like protein 51; TrEMBL-Plants: tr|A0A0B2SSA4|A0A0B2SSA4_GLYSO Probably inactive leucine-rich repeat receptor-like protein kinase; Found in the gene: LotjaGi6g1v0320500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:63706522..63708519) extracted from Lotus japonicus Gifu genome v1.2.
TTTAGTACTAAACCATTAATAGCACTAGCTGCATTATATTATGCTTATTCTCATTTTCTCTCCCTCTCCCTTAACCATTT TTACAGTTCCATCCTTCCCACTCTCCTCCATACCAACACAACAGCACATGTGTTTATCTGACCACCACTGGAGCCATGAA AACACCGCCACAATCACCACCACCACCGCCACCACTTCTCATTCTCCTCTTCCTCCTCCTCTTCACCACCACCACCACCC CATCCCTCTCTCAACCTCTCCCCCCAACCCCTGCCCCCACCTCTCCTCCCTCATCAAAACCCTCTTCTCCTTCCACTCTT GACCCAAAACAAGTCACAGCCCTTCAATCCCTCAACATCCCCACCTCAAAAGACCCCTGTGCTCAACCTTCCCTCCACAA TGCCACCCTCTGCGACTCCTCCAAACCCTTCCGCCACCTCATCTCCCTCCGCCTCAGCAACTGCTCCTCCTACGTCGCTC TCTCCTTCACCGCCCTCAAATCCCTCTCCACCATCCAGTCCCTCCAGCTCCTCAACTGCCCCGTCGCCCCCATCCGCTTC CCGCCGGAGCTCATCGCCTCTCTCCGCTCCTTCACCTCCGTCAACAGCCTCAGCAAAGTCTCCGGCGTCTGGCTCTCACA GCTCGAAAATCTCACCGATCTCACAGTCTCCAATGCTGAAGTCAAAGCCACTGGCCCTTACGTTATCCTCAGCAACATGA AGAAGCTCAGAACCTTAACCATTTCCAACGCCAATCTCACTGGCTCTCTCCCCGGACACGTTCATTCCAACCTCACCCAC ATAGATTTCTCCGGCAACCACCTCAAAGGAAGCATACCACCTTCCATCACCATGCTTGACAGCCTTCAAAGCTTGATTCT CTCCTCCAATGCGCTCACCGGTGAGATACCCGCTTCCATTGGCGACTTGATTTCACTGAAGAATCTGTCTCTGGCTTCAA ATTCGTTTTCTGGGTCCATCCCAGATTCAATTTCTGCTGTACCAGGACTAGTACACTTGGATCTGAGCTCAAACCAGCTC AATGGGACCATTCCAAGTTTCATTTCACACATGAAGAGCCTCAAGTACCTGAATCTAGCTAACAACAATCTTCGCGGGGT TATGCCTTTCAATGCGAGTTTCATAAGCAAGCTTTCAGTGCTGAATGTTGGTGGGAATGGTAACCTGTGCTATAACCATT CTGTTGTGTCTTTGAAATTGAAGCTTGGGATTTCTCGTTGTGATAAGTATGGAATGCCGGTGTCTCCACCTTCTAAGGAT TCTTATGCGGATGATAGCGGTGACTACGACGACGGTGATGATGAAGATGGTAGCAAGCAGAAGAAGGAGCATCATCATGG GCCTAACAAGTTTGTTCTTGGTGTTGCTATTGCGCTTTCTTCTATTGTCTTTCTAATTGTTTTCTTAATTGTGTGCTCAA AATGTCGTCGTTAAAAGCAATTTTTGATTCCAGGTTGTTTAGATTAGGGGAAAAAATTGATTACTTAATTGAGTGGAGGG CTTGTTTACTATATTTATATTTATTATAGTGTACAATGATGATAGAGTAGGATCAAGGAGTGAAAAGAGAATGGAAATGG AAATGTAACTGGAAAACAAAGATGGAAATTTCATGGAGATTATATTTGTAAAAATTTGCCCAATGAAATTGAGAGGAAAA ATGAGAATCATTAAATTAAATCCATTGCATTGAGTTTGTTATGGAACACTTGGCTTTGGAACCCTGTTTTCAGCAGTTTA GAGTAAAAGGTGGAAGTGGGGACTGGGAATGTGGTATCTGAAAGATGTACTACTATTTTACTTGTGCAATAAGCGTTGCT TTTGATTTTAAGTTTTAACGTTTCTTAATGATAGAGATTTAATGCTGACTTCAAAATTATCAAGTTATCAACCTCTTGTT GCACTATTGCATTAATATCAAGTTATCAACCTTCTTAGCTGGGAAAATGTTGTGTTTATTCAATTTGCTTTCTAGTTT
CDS sequence (LotjaGi6g1v0320500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAACACCGCCACAATCACCACCACCACCGCCACCACTTCTCATTCTCCTCTTCCTCCTCCTCTTCACCACCACCAC CACCCCATCCCTCTCTCAACCTCTCCCCCCAACCCCTGCCCCCACCTCTCCTCCCTCATCAAAACCCTCTTCTCCTTCCA CTCTTGACCCAAAACAAGTCACAGCCCTTCAATCCCTCAACATCCCCACCTCAAAAGACCCCTGTGCTCAACCTTCCCTC CACAATGCCACCCTCTGCGACTCCTCCAAACCCTTCCGCCACCTCATCTCCCTCCGCCTCAGCAACTGCTCCTCCTACGT CGCTCTCTCCTTCACCGCCCTCAAATCCCTCTCCACCATCCAGTCCCTCCAGCTCCTCAACTGCCCCGTCGCCCCCATCC GCTTCCCGCCGGAGCTCATCGCCTCTCTCCGCTCCTTCACCTCCGTCAACAGCCTCAGCAAAGTCTCCGGCGTCTGGCTC TCACAGCTCGAAAATCTCACCGATCTCACAGTCTCCAATGCTGAAGTCAAAGCCACTGGCCCTTACGTTATCCTCAGCAA CATGAAGAAGCTCAGAACCTTAACCATTTCCAACGCCAATCTCACTGGCTCTCTCCCCGGACACGTTCATTCCAACCTCA CCCACATAGATTTCTCCGGCAACCACCTCAAAGGAAGCATACCACCTTCCATCACCATGCTTGACAGCCTTCAAAGCTTG ATTCTCTCCTCCAATGCGCTCACCGGTGAGATACCCGCTTCCATTGGCGACTTGATTTCACTGAAGAATCTGTCTCTGGC TTCAAATTCGTTTTCTGGGTCCATCCCAGATTCAATTTCTGCTGTACCAGGACTAGTACACTTGGATCTGAGCTCAAACC AGCTCAATGGGACCATTCCAAGTTTCATTTCACACATGAAGAGCCTCAAGTACCTGAATCTAGCTAACAACAATCTTCGC GGGGTTATGCCTTTCAATGCGAGTTTCATAAGCAAGCTTTCAGTGCTGAATGTTGGTGGGAATGGTAACCTGTGCTATAA CCATTCTGTTGTGTCTTTGAAATTGAAGCTTGGGATTTCTCGTTGTGATAAGTATGGAATGCCGGTGTCTCCACCTTCTA AGGATTCTTATGCGGATGATAGCGGTGACTACGACGACGGTGATGATGAAGATGGTAGCAAGCAGAAGAAGGAGCATCAT CATGGGCCTAACAAGTTTGTTCTTGGTGTTGCTATTGCGCTTTCTTCTATTGTCTTTCTAATTGTTTTCTTAATTGTGTG CTCAAAATGTCGTCGTTAA
Protein sequence (LotjaGi6g1v0320500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKTPPQSPPPPPPLLILLFLLLFTTTTTPSLSQPLPPTPAPTSPPSSKPSSPSTLDPKQVTALQSLNIPTSKDPCAQPSL HNATLCDSSKPFRHLISLRLSNCSSYVALSFTALKSLSTIQSLQLLNCPVAPIRFPPELIASLRSFTSVNSLSKVSGVWL SQLENLTDLTVSNAEVKATGPYVILSNMKKLRTLTISNANLTGSLPGHVHSNLTHIDFSGNHLKGSIPPSITMLDSLQSL ILSSNALTGEIPASIGDLISLKNLSLASNSFSGSIPDSISAVPGLVHLDLSSNQLNGTIPSFISHMKSLKYLNLANNNLR GVMPFNASFISKLSVLNVGGNGNLCYNHSVVSLKLKLGISRCDKYGMPVSPPSKDSYADDSGDYDDGDDEDGSKQKKEHH HGPNKFVLGVAIALSSIVFLIVFLIVCSKCRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 32 | 32 | - | – | |
| SignalP_EUK | 1 | 32 | 32 | - | – | |
| Phobius | 1 | 32 | 32 | - | – | |
| Phobius | 1 | 13 | 13 | - | – | |
| PANTHER | 10 | 429 | 420 | 6.9E-111 | – | |
| PANTHER | 10 | 429 | 420 | 6.9E-111 | – | |
| Phobius | 14 | 24 | 11 | - | – | |
| Phobius | 25 | 32 | 8 | - | – | |
| MobiDBLite | 29 | 57 | 29 | - | – | |
| MobiDBLite | 32 | 51 | 20 | - | – | |
| Phobius | 33 | 405 | 373 | - | – | |
| Gene3D | 47 | 361 | 315 | 1.0E-51 | ||
| SUPERFAMILY | 87 | 346 | 260 | 1.36E-41 | – | |
| Pfam | 212 | 231 | 20 | 1.2 | ||
| Pfam | 236 | 295 | 60 | 1.4E-8 | ||
| PRINTS | 285 | 298 | 14 | 3.1E-5 | – | |
| PRINTS | 306 | 319 | 14 | 3.1E-5 | – | |
| MobiDBLite | 370 | 400 | 31 | - | – | |
| Phobius | 406 | 427 | 22 | - | – | |
| TMHMM | 406 | 428 | 23 | - | – | |
| Phobius | 428 | 432 | 5 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0320500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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