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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0329400 |
| Transcript ID | LotjaGi6g1v0329400.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like protein kinase; TAIR: AT1G28340.1 receptor like protein 4; Swiss-Prot: sp|Q9LIG2|RLK6_ARATH Receptor-like protein kinase At3g21340; TrEMBL-Plants: tr|A0A0B2QFM0|A0A0B2QFM0_GLYSO Putative leucine-rich repeat receptor-like serine/threonine-protein kinase; Found in the gene: LotjaGi6g1v0329400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:64424645..64431054) extracted from Lotus japonicus Gifu genome v1.2.
GTTAATGCAAAGTGCAGACACGTCCAACTATCTTCACTTTCTCTCTCTAGAAAAACCAGCGATGTGAGAGAGAGAGAGTG TGAGGGAAGAAGATGAAGATGGAGATGCCGAAGACCACAATGCTTCGATTTCTTCTGCTGCAGATGCTCTTTCTCTGCTT TGCTTCCACCGCTCATGCTGCTCAACGAGGTGAGCTTCCTCTGCTACCTGCTTCATGCTCAATTATTTCCCCTTTTCTAG CATCAGTTCATGTACAATTGAAGTTCATAAATGGGTTGATGCAGCTTGGATTTCACTCTGTTTTGCTTTCAATTGTGTCA TCAAGGAAAATTGCATGCGTGTGTGTCAGTGTGTGTAGTACTGCTGGTTGTAATTGGCGCTTGAATCTGAGTGATGAGGA TGAGGGTTCGTTTGAATTTGGCTGGAATTACTCAATTAGATTAACAATGGAAAATTCTTCGATCTGAAGAATATTACAAC TATTTCAGCTTGTTCAAACTCTGGAACAATCTAAGTTTGACTCCTTTTTTAGTTACACTCAGTCTCAATAAGAATAGGTA CCCTGTTGAAATTGCTTCAGTTCGTTTTATAACTTGCTTTTTTTGTTACATTTTGCTTGAATGGTTGCATTTAATTGGCT AACATCTCAGGAAGGTGATTAAGTTATGCTTTTGTAATGTGTGAGAGTATGCTATGCAATCAATCTATTGGCATTATGCA AACAGTAAGAGCTAGTTCCCACTCCCTGGCTGTTTTTTCTGGTGGATTTTAGTGTCAACGAAACGAGCGCGATTGCTTGC ACATTCCAAATGATAGGATTTCCATAAATTTGAGATGTTTTTGTTTTTTGAAACTTTATTCACAATTGACTTGGACCAAA ATTTATGCAACTTTGTATTCATTGCAGGGCCATTTGCTATGCGTATAAACTGTGGGGCTCGTCAAAATGTTCAAACAAAA CCAACCACAACCCTTTGGTATAAAGACTTTGGATATACAGGCGGCATCCCTGCCAACGCGTCTACAACAAGTTACATCGC CCCTCCTCTCAAAACTCTTCGCTATTTCCCCTTGTCTGGAGGTCCTTCAAATTGCTACAACATTCATCAAGTGCCAAAGG GGCACTACTCAGTCAGGGTCTTTTTTGGACTTGTTGCTCATGCTAGAACTACTGATGAACCTCTATTCGACATCTCAATT CAAGGCACTCAAATATATTCCTTGAAATCAGGTTGGACTAATCAGGATGATCAAGCATTTACTGAAGCCCAAGTGTTTCT TATGGATCGTTCTGTCTCAATCTGTTTTCATAGCACTGGTCATGGAGATCCAGCAATTCTTTCAATCGAGATTCTTCAAA TCGATGACAAAGCTTATTATTCTGGATCACAGTGGAGCCAAGGGACAATACTTAGAACAGTTAAAAGGCTGAGTTGTGGT TTTGGGCAGTCAAAATTTGGTGAGGATTATGGTGCATATCCTCTAGGAGGGGACAGATTTTGGCAGCATATTAAGACTTT TGATCAGGGCTCTGATCGACCTAGATCTGTTGAAACTAGAATAAAAAAGACTTCGCTTGCACCAAACTTCTATCCAGAAA CTCTTTATCGATCAGCACTTATTAGTACTAGTAGCCAGCCTGATTTAACATATACATTGGATGTGGATCCCAGTAAAAAC TATTCTATTTGGTTACATTTTGCTGAGATTGATAATTCAGTGACTTCCACAGGACAAAGGGTCTTCGATATTATGATAAA TGGTGATGTTGCTTTTAAAGATGTTGACATTGTGGAATTGAGTGGGGATCGTTATACTGCCCTTGTGCTTAATAAAACTG TTACTGTTAATGGGAGGACATTGACAATAACTTTGAGGCCGAAAGAAGGAAGTCTTGCCATAATCAATGCAATAGAGATA TTGGAAGTTATAATGGCTGAGTCAAAAACTTTATCAGATGAAGGTACATATGCCAACTCCTAATTTTGTTTTTGGAGTAC ACCCTTTGACCTGTTAACACACCTCAAGATAATCTAATTGGGGTCTGTGGCTCATTCTAAATACAAATTAAATTGGTTTC GACCAAATTATGTGTTATTAGCCTGTTATTTGCTACTTTTAAATGCAGTGTCGTACTTCTTTGGTCTCTGTCTTGTCATA TTGTCTTTAGCGGATTGCTCTTGTTGTTCTTTCTTCCTCTTCCTTTCAGCGATGACATTCAAGCTTAATAGTATTGATTG GTTACTCTATTTTTACTTTTACGTCTTCTCTAATTTTATATACTATTAGTGGTATCAAATGTGATTTCCTGTAATCCAAA TGCATGTTAATTTTTGCTAGTTAATCGTTGTTCTTTTACTCTAGTTAAGGCCTTACAAACATTGAAGAAGGCTTTGGGGC TTCCTCCTAGGTTTGGGTGGAATGGTGATCCTTGTGTTCCTCAACAACATCCATGGACTGGAGCAGATTGTCAATTAGAC AAAAGTAGTGGCAGTTGGGTCATTGATGGACTGTAATTTCTTATTACCCTTATTCTCAGGCTGTTATTGTACATTTGATT GTGTGGTGACATTATACCTGCATTTTTATTTCTCAATATTTTCTTTTTGTACCAAAACCAAGAATCAAAACTTTGTTTTT TCAGCATCAAAGCCTCTAAATCAGCAAAATTGAATCCCACCGACCCCCCCCCCCCTCAAAGCGAAAAAAAGGTACTGACC AATGAAACTTACTTTCAAACTGATCAGCCGAACTTGTTTTCCAAATTTGTTTCATTCACTCATTTGGGAAGTTCACGTTT TGTATGCTCAAATCAACCATTTTGTGCCCATTATTTGAGGAAGTAGCGCTTATATTGGCCCTCCCCTTTCTTAACATTTC TCTGGACCCTGTTTGCATCAAAAGAAAATTCTCTCCATCTGCACTTAGCAAGGAAATTAATACTTACCACTAGGGTGAAA AGCATTTGTTTTGCATCGGAAGCTGTATTAAATATTAAATTATAATAACTTGCTTACTTGTTGCTGTATCTGTTGATGAG CAGTGGTCTTGACAATCAAGGTCTGAAGGGTTACTTGCCAAAAGACATTTCCAGGCTGCATAATCTACAAATCCTGTAAG CCCTAAATACATTCCTTTCAGCCAAACATTGTCGTGGGATGGATGTACGAATTATGCTCAATATGTTGTTGATAATAAAA TGGATTGTTAGGTCTAGGCCTTGATCAATATGTTGATACTTACCACTAGACCTAGGCATTGATCAAATAGCAAACTGCAT GATTTGAATAATTTGTCTGACCTTTTAATTTTTTCTGTTCAATTCACTATTCCCTTAGAAATGTAAACGCTTACTTTCTT GCTCATTCCTTATGCTTATTTTACTTGTACATTACAGAAACTTGAGTGGAAACAGCATTCGTGGAGCCATTCCATCTTCA ATTGGAAAAATAACTAGCTTGCAAGTGCTGTAAGCGACTTCTTGCTCTTGCTCTTCTCAGTTCATATGGCTGATTGGTTC TGTTGTTTATATTTTCCAAGTTCATAAAATGTAGTACAATTCCAATATGAGATTCTCATATTCGGCACAACCACGCACGT TTGTTGAGAATTTATGTCAGCTCCAATCCTGATAGCAATTCTTCTGTGTGAACCAAGCCTTAGTTCTAAAGGAATAAGAT AGTATGGGATCTTAAAATTAAAGTAGCTGCAAGATCTCAGGAGCAAGATACGATGAACATGAAAAATGAACTTGTATTTG TAGTTTTTACAACTTATTTTGTTACTAATGAGTCTTCATTTTGCTGACTTACTCTTGCTGATCTCCTACATGGATTGTGA TAGAAACCAATAAAACAGTTAACAGGAAGAGTAAAAGATGAGAGGAAATGGATTGATTTGATTAATGGAACAAGAAGAAA ATACAGTAGTCACTGCTACTCCAGAGCTAAGCTCCTATAGAGAAATCATGCTTCTCTATTCTCTATTACAATTAGCTAAT TTCCAGGTGCCTCTCACTAGCTAACAGAATTCCCCTGATTCCCGTAACTAACTCTTCTTAGCATCTTTCCCTCACTCTGC CAGCTCACTCCCCTTCTAGGTGCTTCCTTTCTTTCCCCTTCTAACATACACACGCCACACCTTGGGCCTAGTATTAGTTA TATCAGCCCATTCCTGACTTGGGGGCCTATCAGATTAAAGCGTATCCTTTGTAACTATATATCATATTAAGTGTACCAAA AAAAAAAATCATATTAAGGCCTCAGAAATTAAGAACAAATGAACGAAAAGGGAATTTGATTAAGTAATATATTTTACTTA TAGTTTATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATGGAATTAATAGCAATACAGTGATTAATCCATGTT GCAAAATCACTATTATTTGTAAAAGCTAAGGGCTAAATTTACATTAAAAAAGTTTGCAAAGAAAAGGAATCAGATACCTA AGATTCTAAACTAAAGGTTTATGTTTTAGGGTCAGCATTGCTTTCGTTCTCTATATTGAGAGGTCAGCCAATTTGCAAAA TGCTTTATTTGTGTGTCAGTGGCTAGTAGTACTTCAATGACTCAGTTTCTTCATGCTTCGATTTAAATTACTTTAGATTA GCTTCACTGTGAGATTACTGGAAGGTTTGAATCCTTTATTTGGCTGTCATGGTAATTTTTGAATGCCATGTACACATGCA GTGACCTGTCCTACAACTTATTCAATGGATCGATTCCTGAAAGCCTTGGACAATTGACATTGTTACAAAGACTGTAAGAT TCCTTAATCTTTTAACTTGCGCAAGAAAAATAAGAAGACTAGAAGTTTCTATTAAAAAAGTCTTCATGCAGGAACCTTAA TGGCAACTCTCTGTCTGGAAGGGTCCCAGCTACTCTAGGAGGAAGACTTCTGCACAGAGCTAGCTTCAAGTATGTTGCCA ATATTAAACACTCGAATAAACCTAAAGTGAATTCATATCCAATTCGAGGAGAACCATATATCTTCATGCTGTTTCTCCCC TTTCTTTGGTATTAAGGTTTCTAAATCTACATTTCTGGATGTCTGCAGTTTTACCGATAATGCAGGTTTGTGTGGTATGC CCGGATTACGTACATGTGGAACTCATCTTTCTGCCAGTGCGAAAGTTGGTATTGGGTTAGGTGCTTCTATAACTTTTCTA GTTCTGATTACCGGTTCAGTTTGCTGCTGGAAAAGGAGACAGAATATCCTCCGGACTCAACAAATTGCAGGTGAGGATGT TAATATCTGTGGCTTGCTGTTATCTTAGTACTCTATTACTGGGTTGAGTTTATACCAGTTGCATTGCACTTGTACTTAAG TTATCAATCTAAACACAGTTGCATTGCATTCCACTTGTACTGGGTTGAATCAGGCAAAATTATGAAACACCCTCTGGTAA CCTTGCTGCTAAGCATAGCTAACATAATCTTGGATGGAAATTTATACCTTAATTTTCTTTTGTAGCGAGGGCAGCTCCAT ATGCAAAAGCAAGGACTCATTATTCACGTGACATCCAAATGACAAGGCATAATAATTATGGCAATACTCGCACTGCTGCG GAGAATGGGCCTATCTTGCTTACACAATAACATCCCATTATTCTGGTATCTTTGGAAGACTATCCTACAGTTTCTGTCTC ACAACTTCAATTAATCATCTTTTTATCCAGTTAATCTTCAATTAGAAGGCTTATATATGTGGTATTTTGGTGTGAATGGC AGGTTAATCTGATCTTCGATGGCTTTATCCAATGGTGTGCTTCCCCCAAATATTGACGGAGTTTTTTGAACCCATTGAAT CACTTCTTAGAAGCTGCTGAGAACCTTCCTAATTTGTAAATCAGAAAATTTTGTACATTACCATGTTTACGTCTTCATTT CTCCCCTGTTTCTGAGCTTCTATACATTTCTATCTGTTCATATAGGATTTGTCAGTTGTCACAGTTAAAAAATTGAAATG CAAATAGAAATTATAGTGTACCAATGTACCATGGAAGATTAGTGATGTCTAATTTACATATTTTCCACAGTTTTTTCAGT TGTATCCTGTTTCAGTTAATGTACGGAATGGATAATTGGGCAATGGTTTATGCTTTGATAAGAATTACAAATAATGAGGA TCTGTCTGTTGTTCTTCAATCATTATAAGTTTGATTCCAGGGTCCTGGTCTCCTGTAGTCCTGAGCATCCACAATGCAAG TGGCTTACAACATCTCTTAGCCATAAGCAACATTGCCTTTTTTTTTCTTCTATTGAAGCATGCTAACATGAAAAGAGAGA GGCCCAACCTTGATATGGATCATAGGTAAACTACAAAAAAACAAGCAAAGGAGACTAGGTCCCCTTAGACACACAACTGA CACAAGTACA
CDS sequence (LotjaGi6g1v0329400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGATGGAGATGCCGAAGACCACAATGCTTCGATTTCTTCTGCTGCAGATGCTCTTTCTCTGCTTTGCTTCCACCGC TCATGCTGCTCAACGAGGGCCATTTGCTATGCGTATAAACTGTGGGGCTCGTCAAAATGTTCAAACAAAACCAACCACAA CCCTTTGGTATAAAGACTTTGGATATACAGGCGGCATCCCTGCCAACGCGTCTACAACAAGTTACATCGCCCCTCCTCTC AAAACTCTTCGCTATTTCCCCTTGTCTGGAGGTCCTTCAAATTGCTACAACATTCATCAAGTGCCAAAGGGGCACTACTC AGTCAGGGTCTTTTTTGGACTTGTTGCTCATGCTAGAACTACTGATGAACCTCTATTCGACATCTCAATTCAAGGCACTC AAATATATTCCTTGAAATCAGGTTGGACTAATCAGGATGATCAAGCATTTACTGAAGCCCAAGTGTTTCTTATGGATCGT TCTGTCTCAATCTGTTTTCATAGCACTGGTCATGGAGATCCAGCAATTCTTTCAATCGAGATTCTTCAAATCGATGACAA AGCTTATTATTCTGGATCACAGTGGAGCCAAGGGACAATACTTAGAACAGTTAAAAGGCTGAGTTGTGGTTTTGGGCAGT CAAAATTTGGTGAGGATTATGGTGCATATCCTCTAGGAGGGGACAGATTTTGGCAGCATATTAAGACTTTTGATCAGGGC TCTGATCGACCTAGATCTGTTGAAACTAGAATAAAAAAGACTTCGCTTGCACCAAACTTCTATCCAGAAACTCTTTATCG ATCAGCACTTATTAGTACTAGTAGCCAGCCTGATTTAACATATACATTGGATGTGGATCCCAGTAAAAACTATTCTATTT GGTTACATTTTGCTGAGATTGATAATTCAGTGACTTCCACAGGACAAAGGGTCTTCGATATTATGATAAATGGTGATGTT GCTTTTAAAGATGTTGACATTGTGGAATTGAGTGGGGATCGTTATACTGCCCTTGTGCTTAATAAAACTGTTACTGTTAA TGGGAGGACATTGACAATAACTTTGAGGCCGAAAGAAGGAAGTCTTGCCATAATCAATGCAATAGAGATATTGGAAGTTA TAATGGCTGAGTCAAAAACTTTATCAGATGAAGTTAAGGCCTTACAAACATTGAAGAAGGCTTTGGGGCTTCCTCCTAGG TTTGGGTGGAATGGTGATCCTTGTGTTCCTCAACAACATCCATGGACTGGAGCAGATTGTCAATTAGACAAAAGTAGTGG CAGTTGGGTCATTGATGGACTTGGTCTTGACAATCAAGGTCTGAAGGGTTACTTGCCAAAAGACATTTCCAGGCTGCATA ATCTACAAATCCTAAACTTGAGTGGAAACAGCATTCGTGGAGCCATTCCATCTTCAATTGGAAAAATAACTAGCTTGCAA GTGCTTGACCTGTCCTACAACTTATTCAATGGATCGATTCCTGAAAGCCTTGGACAATTGACATTGTTACAAAGACTGAA CCTTAATGGCAACTCTCTGTCTGGAAGGGTCCCAGCTACTCTAGGAGGAAGACTTCTGCACAGAGCTAGCTTCAATTTTA CCGATAATGCAGGTTTGTGTGGTATGCCCGGATTACGTACATGTGGAACTCATCTTTCTGCCAGTGCGAAAGTTGGTATT GGGTTAGGTGCTTCTATAACTTTTCTAGTTCTGATTACCGGTTCAGTTTGCTGCTGGAAAAGGAGACAGAATATCCTCCG GACTCAACAAATTGCAGCGAGGGCAGCTCCATATGCAAAAGCAAGGACTCATTATTCACGTGACATCCAAATGACAAGGC ATAATAATTATGGCAATACTCGCACTGCTGCGGAGAATGGGCCTATCTTGCTTACACAATAA
Protein sequence (LotjaGi6g1v0329400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKMEMPKTTMLRFLLLQMLFLCFASTAHAAQRGPFAMRINCGARQNVQTKPTTTLWYKDFGYTGGIPANASTTSYIAPPL KTLRYFPLSGGPSNCYNIHQVPKGHYSVRVFFGLVAHARTTDEPLFDISIQGTQIYSLKSGWTNQDDQAFTEAQVFLMDR SVSICFHSTGHGDPAILSIEILQIDDKAYYSGSQWSQGTILRTVKRLSCGFGQSKFGEDYGAYPLGGDRFWQHIKTFDQG SDRPRSVETRIKKTSLAPNFYPETLYRSALISTSSQPDLTYTLDVDPSKNYSIWLHFAEIDNSVTSTGQRVFDIMINGDV AFKDVDIVELSGDRYTALVLNKTVTVNGRTLTITLRPKEGSLAIINAIEILEVIMAESKTLSDEVKALQTLKKALGLPPR FGWNGDPCVPQQHPWTGADCQLDKSSGSWVIDGLGLDNQGLKGYLPKDISRLHNLQILNLSGNSIRGAIPSSIGKITSLQ VLDLSYNLFNGSIPESLGQLTLLQRLNLNGNSLSGRVPATLGGRLLHRASFNFTDNAGLCGMPGLRTCGTHLSASAKVGI GLGASITFLVLITGSVCCWKRRQNILRTQQIAARAAPYAKARTHYSRDIQMTRHNNYGNTRTAAENGPILLTQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 29 | 29 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 29 | 29 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 29 | 29 | - | – | |
| SignalP_EUK | 1 | 29 | 29 | - | – | |
| Phobius | 1 | 12 | 12 | - | – | |
| PANTHER | 10 | 631 | 622 | 0.0 | – | |
| PANTHER | 10 | 631 | 622 | 0.0 | – | |
| TMHMM | 13 | 30 | 18 | - | – | |
| Phobius | 13 | 24 | 12 | - | – | |
| Phobius | 25 | 29 | 5 | - | – | |
| Phobius | 30 | 557 | 528 | - | – | |
| Pfam | 39 | 373 | 335 | 1.5E-66 | ||
| Gene3D | 230 | 375 | 146 | 2.7E-17 | – | |
| Gene3D | 376 | 550 | 175 | 1.1E-33 | ||
| SUPERFAMILY | 381 | 543 | 163 | 2.77E-27 | – | |
| Pfam | 454 | 513 | 60 | 2.8E-9 | ||
| Phobius | 558 | 579 | 22 | - | – | |
| TMHMM | 560 | 579 | 20 | - | – | |
| Phobius | 580 | 633 | 54 | - | – | |
| MobiDBLite | 613 | 633 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0329400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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