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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0339200 |
| Transcript ID | LotjaGi6g1v0339200.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | External alternative nad(P)h-ubiquinone oxidoreductase b2, mitochondrial; TAIR: AT4G05020.1 NAD(P)H dehydrogenase B2; Swiss-Prot: sp|Q94BV7|NDB2_ARATH External alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochondrial; TrEMBL-Plants: tr|I1MEA0|I1MEA0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0339200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:65330297..65334593) extracted from Lotus japonicus Gifu genome v1.2.
TTGCGGTTACGTTTTGTTTATCTTTCACTCTACACCAAATTTCACTGTTTTTTATAGATCCATGCACTTGCAATGAACAT GATAATTTCAATTTTCAAGTTATATTTATTTCAGTTTTCACAGTTTTTGCATTGTTTAACTGTAGATCTGTTGTTTATGA TGTTAATTTGATTTGATGCGTGCAGTGGTGGTGGTCTTTTGGCTTATGGCGCGATTGCTCCATCGGAAGCGGCGGTTACA GAGAGGAAGAAGGTGGTGGTGCTGGGAACTGGCTGGGCGGGTACAAGTTTTTTGAAGAATCTGAATAATCAGAAATATGA GGTTCAGGTTTTGTCGCCGCGTAACTATTTTGCTTTCACTCCTTTGCTGCCTAGCGTGACGTGCGGTACTGTTGAAGCCC GCAGCATTGTTGAACCCATTCGCAATATTTGCAGGAAGGTTAGGATATTATTGTGTTCATCAAATATTGCATCACGATTT GTTACCTTTTTCCAGTTTCAATTTTTGTTTCAAATCAAATCAATAAATTGATTGATAAAATGAAAATAGTCTATAATATA TTTTGGAAGCAAATTTTACTTATACTATGCTATTAAATTTACTTTTTATGCTTAAATTTTAACCTCAATTTGATTTAGTT CATGATTGAGTGGTTAAGATGTACTTCTTTACTCTCTTATAAAAATACCATTATAAAATAACAAATCATGAACTTAACAA CTCAACAAAAAAAAAATAAAAAGAGTAAAATGTCGATACATGGTTGTAAATTTTGTTTTCTACCAAATCATAAATTTATA GTATTTACTATTTAGTTTAATTAAAATTAAAAATGAATGTAACAGTTCAAAATTAAAATGAAACAATAAGTTTAATCAAA GTAGTGTCCTAACATAGTAGTAAACAACATTAGTTATTCTAGTATTTTTTTTGAAATGACATGTTGGTTAATTTATTTTA AATCTATCTCCCAAAGTATAATTAACCAACCTGAAAATGAATTGTTTCAACCAAATGTATTAAAAAAATTGTCTTTACAT ATTTAGGCATAAAGAAAAATCAATATCTTGTGAATATTACTCTTGAAACCTTACTTTAGGAATTGAATTCAATTCAATTG GTAAAAATAGTACTTTTGCACTTACATTTACCAAGAAAGTGAAGGAGGAGGAAGTGTGATCTGGGAATAGGTTGAATTTA GATGATAGAGTAAAATTGTTACAACTAAAAACTTTAATCGGAAACAATTATATTTCATATTAACAGTTATCAATTTCAAG CAGTCCATCTATGAAGTTAGTCAAAATTACTAATCAGTTAATCACAAGCTATGCGGTTGGCCAACTTTTCTCTGCTCATA ACTTCTTCTTTTGTTAGAGAAAATGTAAATGGTATCTAAGATAACTAACTGCATTTGCATTGAAACTTGTCTGGACGCAT TATTTGGTTGTGAAACTTGTCTTCACTATAGTACATAGGATACAATATGTTTATGTTATCTATACTTACTACATTGTAGC TTATCATTAGCACGAAACAAAATGTTGGCACGATCACAAATTGTTGTTAGGATATGCAGTTTCTGATTATTAGATTACCA GTGAAGCAATTTGCTCTGTTTACTAGTGGTACACTAGATTCTGGTGATTATGGTTGTAATTAGTTCCTCTTTCCTTTTTT TAACCTGAGCAGAAAAAGGTGGATGTACAATTCAATGAAGCAGAATGTGTCAAGATTGATGCCGAAAATAAGAAAGTTTA TTGTCGATCTAACACGAACAATAATTTGAATGGGACAGAAGAATTCGCTGTGGATTATGACTACCTAATTATCGCTGTGG GCGCCAATGTCAATACATTTAATACTCCAGGAGTGGTGGAGAATTGCCATTTTTTGAAGGTAACAATATTCATCTTGCCA TTACTTTTCAGTATTTGTTTTGATGCAGAGCATTTAAGAAAAACATCATTCAGTAAATGATATAGTCAGGGTATGTGAGG AAGTGATCAAACCCATTGTTGTTATTATGGGGGTGATGGTGTTCAATGGATCCTGTTTATGCTTGTATGCATACTTGTGG TTTTTAATTATCTCCTGGACATGCATTTGTAGGAAGTTGAAGATGCTCAGAAGATTAGAAGAACAGTTATCGACTGCTTT GAGAGAGCGAATTTGCCCGATTTAAGTGAAGAAGAGAAAAAGAGAATTCTTCATTTTGCTATCGTTGGAGGTGGGCCAAC TGGAGTGGAATTTGCAGCCTCACTTCATGACTTTGTCAATGATGATTTGGTCCGTTTATATCCTGGGATAAAAGATTTAG TTAAAATTACACTTCTGGAGGCCGGAGATCATATCTTGGGCATGTAAGTACATGAAACATAAATCAGTTCTTTTGCTTCT TATTATTAAGAACTTGTTGCAGTGATATCCGGACATATAGTTTCCTGTGTTTGTGACTACACATTATAAAGAACTCTATG TTCGAGTCTGCTGTATTTAGTTTGTCTAACTTGTTGTGTTCTCTGGCTGTTTTCATAGGTTTGACAAAAGAATCACTGCT TTTGCCGAAGACAAGTTTCAAAGAGATGGGATTGATGTGAAAACAGGATCCATGGTTGTGAAGGTTTCTGAAAAAGAAAT TCACACTAAAGAACTGAAAAAGGGAGGAGAGATTACTGCAATTCCATATGGAATGGCTGTCTGGTCAACTGGTATTGGTA CTCGTCCATTTATTAAAGATTTTATGAAACAGATTGGTCAGGTATGTTATTGAGGAATTAGACATTATATCTGTGCTGAT TCGTAAATTCCATAGTATGTTTCTCTTGTAGTTTGTATCTATTCTTCAGTGAATAAAATTTACATTAATTTGTTATTCAC TCAACATTATCTCTTCTAAACAGGCTAGCAGGCGTGCTCTAGCTACTGATGAATGGTTGAGAGTTGAGGGATGCAACAGT GTGTATGCTCTTGGTGATTGTGCTACCATAAACCAGCGAAAAGTCATGGTATCTAACCCAACATTTGCATCATATATTTA ATCAACTTGCTTGGTAATAAACACACATGGACATATGTGACATTATTATCCATAGACATTAATGTCTATAGTGTATTGTT TCATCTTTGATTTTTCAGTTCCTTTGTTCAGTTTATCATAACTTTGATGGAACAGAAAAATCTCAACCGATGCCTGAAAC TTCAAACAATGCACATTTGCTTAATTGACAATCTAGGCTCTATTGATTCACATCTATCTCAATTGGTTTCTCTTTTCCCC TGTTAATTGTGAATTGGTTTGGCATTTTAGGAAGATATTACTGCAATCTTTAAGAAGGCTGACAAAAAGAGCACCGGAAC ACTCACGGTCAAAGAATTTCAAGAGGTCATGGATGACATCTGTGAAAGATACCCTCAGGTGGAGCTATATCTGAAGAGTA AACATATGCGGAACATTGCTGATTTACTGAAGGAAGCCAAGGGCGATGATAAGAAAGAATCAGTTCAACTGAATATCGAG GAACTCAAAACAGCACTCTCCAAAGTGGATTCTCAGATGAAATTCCTTCCTGCTACAGCACAGGTGCATGTCATGATATT TGCATTGTGGTATTCCTTCAAGCAGTATTTATACATGATGCATGTTTCTCAGTGTTATGATATGACAATGATTTTCTGAA AATCCATATATCAGGTTGCATCTCAGCAAGGCACTTACCTGGCCAAGTGTTTTAACCGGATGGATGATTGTGAAAAGAAT CCGGAGGGTCCTCTACGGTTCAGGGCAGAAGGTCGCCATCGCTTCAAGCCCTTCAGGTCCTTACTCAGAAGCTCTCACCT ATTGTCCAATTCTATCTACTACAATACATTTTGATACATATTTCAAGGTTTTCTCATTAGTTTGCCAATGTTTACTCATT ATTGATCTGTTGTTTGCTCCTCAAGGTACAAGCACTTGGGTCAATTCGCTCCTTTGGGAGGAGAGCAGACAGCTGCCCAG CTTCCTGGGGATTGGGTTTCAATTGGTCACAGCAGTCAATGGCTGTGGTATTCTGTTTATGCAAGGTATTGTGTTCCTTT TCGCATTTGCGTAGCACTTAATGATTTTAAAATGTCATATCGTTGTTAATCACTAAAATGTTATTCTTTGTGATTTTGTA TTCATAATTATGAGCATGTTACCAAGTTTCATTCAATCCTTTTGAGCAGCAAGCAAGTAAGCTGGCGTACAAGGGCATTG GTAGTTACAGACTGGACAAGGCGTTTTATTTTTGGGAGGGACTCAAGTCGCATATGA
CDS sequence (LotjaGi6g1v0339200.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACATGATAATTTCAATTTTCAATGGTGGTGGTCTTTTGGCTTATGGCGCGATTGCTCCATCGGAAGCGGCGGTTAC AGAGAGGAAGAAGGTGGTGGTGCTGGGAACTGGCTGGGCGGGTACAAGTTTTTTGAAGAATCTGAATAATCAGAAATATG AGGTTCAGGTTTTGTCGCCGCGTAACTATTTTGCTTTCACTCCTTTGCTGCCTAGCGTGACGTGCGGTACTAAAAAGGTG GATGTACAATTCAATGAAGCAGAATGTGTCAAGATTGATGCCGAAAATAAGAAAGTTTATTGTCGATCTAACACGAACAA TAATTTGAATGGGACAGAAGAATTCGCTGTGGATTATGACTACCTAATTATCGCTGTGGGCGCCAATGTCAATACATTTA ATACTCCAGGAGTGGTGGAGAATTGCCATTTTTTGAAGGAAGTTGAAGATGCTCAGAAGATTAGAAGAACAGTTATCGAC TGCTTTGAGAGAGCGAATTTGCCCGATTTAAGTGAAGAAGAGAAAAAGAGAATTCTTCATTTTGCTATCGTTGGAGGTGG GCCAACTGGAGTGGAATTTGCAGCCTCACTTCATGACTTTGTCAATGATGATTTGGTCCGTTTATATCCTGGGATAAAAG ATTTAGTTAAAATTACACTTCTGGAGGCCGGAGATCATATCTTGGGCATGTTTGACAAAAGAATCACTGCTTTTGCCGAA GACAAGTTTCAAAGAGATGGGATTGATGTGAAAACAGGATCCATGGTTGTGAAGGTTTCTGAAAAAGAAATTCACACTAA AGAACTGAAAAAGGGAGGAGAGATTACTGCAATTCCATATGGAATGGCTGTCTGGTCAACTGGTATTGGTACTCGTCCAT TTATTAAAGATTTTATGAAACAGATTGGTCAGTGTTATTCACTCAACATTATCTCTTCTAAACAGGCTAGCAGGCGTGCT CTAGCTACTGATGAATGGTTGAGAGTTGAGGGATGCAACAGTGTGTATGCTCTTGGTGATTGTGCTACCATAAACCAGCG AAAAGTCATGGAAGATATTACTGCAATCTTTAAGAAGGCTGACAAAAAGAGCACCGGAACACTCACGGTCAAAGAATTTC AAGAGGTCATGGATGACATCTGTGAAAGATACCCTCAGGTGGAGCTATATCTGAAGAGTAAACATATGCGGAACATTGCT GATTTACTGAAGGAAGCCAAGGGCGATGATAAGAAAGAATCAGTTCAACTGAATATCGAGGAACTCAAAACAGCACTCTC CAAAGTGGATTCTCAGATGAAATTCCTTCCTGCTACAGCACAGGTTGCATCTCAGCAAGGCACTTACCTGGCCAAGTGTT TTAACCGGATGGATGATTGTGAAAAGAATCCGGAGGGTCCTCTACGGTTCAGGGCAGAAGGTCGCCATCGCTTCAAGCCC TTCAGGTACAAGCACTTGGGTCAATTCGCTCCTTTGGGAGGAGAGCAGACAGCTGCCCAGCTTCCTGGGGATTGGGTTTC AATTGGTCACAGCAGTCAATGGCTGTGGTATTCTGTTTATGCAAGCAAGCAAGTAAGCTGGCGTACAAGGGCATTGGTAG TTACAGACTGGACAAGGCGTTTTATTTTTGGGAGGGACTCAAGTCGCATATGA
Protein sequence (LotjaGi6g1v0339200.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNMIISIFNGGGLLAYGAIAPSEAAVTERKKVVVLGTGWAGTSFLKNLNNQKYEVQVLSPRNYFAFTPLLPSVTCGTKKV DVQFNEAECVKIDAENKKVYCRSNTNNNLNGTEEFAVDYDYLIIAVGANVNTFNTPGVVENCHFLKEVEDAQKIRRTVID CFERANLPDLSEEEKKRILHFAIVGGGPTGVEFAASLHDFVNDDLVRLYPGIKDLVKITLLEAGDHILGMFDKRITAFAE DKFQRDGIDVKTGSMVVKVSEKEIHTKELKKGGEITAIPYGMAVWSTGIGTRPFIKDFMKQIGQCYSLNIISSKQASRRA LATDEWLRVEGCNSVYALGDCATINQRKVMEDITAIFKKADKKSTGTLTVKEFQEVMDDICERYPQVELYLKSKHMRNIA DLLKEAKGDDKKESVQLNIEELKTALSKVDSQMKFLPATAQVASQQGTYLAKCFNRMDDCEKNPEGPLRFRAEGRHRFKP FRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTRALVVTDWTRRFIFGRDSSRI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 1 | 24 | 24 | - | – | |
| PANTHER | 4 | 550 | 547 | 0.0 | – | |
| PANTHER | 4 | 550 | 547 | 0.0 | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| Phobius | 16 | 24 | 9 | - | – | |
| Gene3D | 21 | 384 | 364 | 3.3E-126 | – | |
| Phobius | 25 | 550 | 526 | - | – | |
| SUPERFAMILY | 29 | 232 | 204 | 1.02E-24 | ||
| Pfam | 30 | 352 | 323 | 1.2E-51 | ||
| PRINTS | 32 | 51 | 20 | 2.7E-7 | – | |
| PRINTS | 119 | 137 | 19 | 2.7E-7 | – | |
| SUPERFAMILY | 180 | 345 | 166 | 1.02E-16 | ||
| PRINTS | 180 | 198 | 19 | 2.7E-7 | – | |
| SUPERFAMILY | 319 | 433 | 115 | 4.22E-9 | ||
| ProSiteProfiles | 348 | 383 | 36 | 11.752 | ||
| Gene3D | 392 | 550 | 159 | 2.0E-29 | – | |
| Coils | 412 | 432 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi6g1v0339200.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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