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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0066079 |
| Transcript ID | Lj0g3v0066079.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ABC transporter B family member 4-like [Glycine max] gi|356499544|ref|XP_003518599.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 37 | 37 | – | – | |
| Phobius | 1 | 53 | 53 | – | – | |
| SUPERFAMILY | 38 | 364 | 327 | 2.22E-57 | ||
| Gene3D | 44 | 362 | 319 | 4.70E-55 | – | |
| TMHMM | 54 | 76 | 23 | – | – | |
| Phobius | 54 | 78 | 25 | – | – | |
| Pfam | 57 | 329 | 273 | 1.10E-60 | ||
| ProSiteProfiles | 59 | 345 | 287 | 46.461 | ||
| Phobius | 79 | 104 | 26 | – | – | |
| Phobius | 105 | 125 | 21 | – | – | |
| TMHMM | 105 | 127 | 23 | – | – | |
| Phobius | 126 | 180 | 55 | – | – | |
| Phobius | 181 | 201 | 21 | – | – | |
| TMHMM | 184 | 206 | 23 | – | – | |
| Phobius | 202 | 206 | 5 | – | – | |
| Phobius | 207 | 228 | 22 | – | – | |
| Phobius | 229 | 282 | 54 | – | – | |
| TMHMM | 283 | 305 | 23 | – | – | |
| Phobius | 283 | 306 | 24 | – | – | |
| Phobius | 307 | 311 | 5 | – | – | |
| Phobius | 312 | 330 | 19 | – | – | |
| Phobius | 331 | 709 | 379 | – | – | |
| SUPERFAMILY | 370 | 618 | 249 | 8.05E-87 | ||
| ProSiteProfiles | 380 | 616 | 237 | 24.363 | ||
| Gene3D | 380 | 611 | 232 | 3.70E-82 | ||
| CDD | 380 | 618 | 239 | 1.17E-132 | – | |
| Pfam | 399 | 547 | 149 | 6.00E-33 | ||
| SMART | 407 | 593 | 187 | 1.70E-15 | ||
| PANTHER | 513 | 1276 | 764 | 0 | – | |
| PANTHER | 513 | 1276 | 764 | 0 | – | |
| ProSitePatterns | 519 | 533 | 15 | – | ||
| MobiDBLite | 623 | 644 | 22 | – | – | |
| SUPERFAMILY | 695 | 1020 | 326 | 1.09E-59 | ||
| Gene3D | 700 | 1017 | 318 | 1.30E-51 | – | |
| Phobius | 710 | 734 | 25 | – | – | |
| TMHMM | 710 | 732 | 23 | – | – | |
| Pfam | 713 | 985 | 273 | 8.70E-58 | ||
| ProSiteProfiles | 714 | 1000 | 287 | 44.902 | ||
| Phobius | 735 | 753 | 19 | – | – | |
| Phobius | 754 | 777 | 24 | – | – | |
| TMHMM | 755 | 777 | 23 | – | – | |
| Phobius | 778 | 826 | 49 | – | – | |
| Phobius | 827 | 851 | 25 | – | – | |
| TMHMM | 833 | 852 | 20 | – | – | |
| Phobius | 852 | 856 | 5 | – | – | |
| TMHMM | 857 | 874 | 18 | – | – | |
| Phobius | 857 | 874 | 18 | – | – | |
| Phobius | 875 | 935 | 61 | – | – | |
| Phobius | 936 | 955 | 20 | – | – | |
| TMHMM | 936 | 958 | 23 | – | – | |
| Phobius | 956 | 974 | 19 | – | – | |
| Phobius | 975 | 995 | 21 | – | – | |
| Phobius | 996 | 1280 | 285 | – | – | |
| SUPERFAMILY | 1025 | 1273 | 249 | 3.00E-89 | ||
| Gene3D | 1034 | 1267 | 234 | 7.40E-86 | ||
| ProSiteProfiles | 1035 | 1272 | 238 | 24.55 | ||
| CDD | 1035 | 1273 | 239 | 2.46E-135 | – | |
| Pfam | 1053 | 1203 | 151 | 2.50E-36 | ||
| SMART | 1062 | 1255 | 194 | 1.80E-17 | ||
| ProSitePatterns | 1175 | 1189 | 15 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. | ||
| Molecular function | ATPase activity, coupled to transmembrane movement of substances | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0066079.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0066079.1, powered by CORGI.
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