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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0322239 |
| Transcript ID | Lj0g3v0322239.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: zinc finger Ran-binding domain-containing protein 3-like [Glycine max] gi|356519100|ref|XP_003528212.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Coils | 2 | 24 | 23 | – | – | |
| MobiDBLite | 24 | 65 | 42 | – | – | |
| SUPERFAMILY | 178 | 421 | 244 | 1.98E-39 | ||
| PANTHER | 185 | 670 | 486 | 1.70E-173 | – | |
| PANTHER | 185 | 670 | 486 | 1.70E-173 | – | |
| Gene3D | 186 | 364 | 179 | 1.30E-18 | ||
| SMART | 193 | 379 | 187 | 7.50E-19 | ||
| ProSiteProfiles | 206 | 370 | 165 | 19.098 | ||
| Pfam | 215 | 444 | 230 | 2.70E-27 | ||
| CDD | 215 | 352 | 138 | 1.41E-18 | – | |
| SUPERFAMILY | 307 | 373 | 67 | 1.71E-36 | ||
| SUPERFAMILY | 480 | 659 | 180 | 1.71E-36 | ||
| ProSiteProfiles | 499 | 653 | 155 | 11.575 | ||
| Pfam | 502 | 607 | 106 | 4.90E-10 | ||
| Gene3D | 503 | 641 | 139 | 1.40E-11 | ||
| CDD | 512 | 617 | 106 | 5.46E-08 | – | |
| SMART | 524 | 607 | 84 | 2.90E-09 | ||
| MobiDBLite | 671 | 716 | 46 | – | – | |
| PANTHER | 696 | 719 | 24 | 1.70E-173 | – | |
| PANTHER | 696 | 719 | 24 | 1.70E-173 | – | |
| CDD | 1055 | 1095 | 41 | 2.42E-04 | – | |
| Pfam | 1061 | 1092 | 32 | 1.30E-06 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | Endonuclease activity | Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of Lj0g3v0322239.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0322239.3, powered by CORGI.
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