Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PF01844

Source: Pfam

Description

HNH endonuclease

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003676
Molecular function Nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.
Subterm of
GO:0004519
Molecular function Endonuclease activity Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks.
Subterm of

Associated Lotus transcripts 6

Transcript Name Description Predicted domains Domain count
Lj0g3v0322239.1
– PREDICTED: zinc finger Ran-binding domain-containing protein 3-like [Glycine max] gi|356519100|ref|XP_003528212.1|
Domains
14
Lj0g3v0322239.2
– PREDICTED: zinc finger Ran-binding domain-containing protein 3-like [Glycine max] gi|356519100|ref|XP_003528212.1|
Domains
14
Lj0g3v0322239.3
– PREDICTED: zinc finger Ran-binding domain-containing protein 3-like [Glycine max] gi|356519100|ref|XP_003528212.1|
Domains
21
Lj0g3v0322239.4
– PREDICTED: zinc finger Ran-binding domain-containing protein 3-like [Glycine max] gi|356519100|ref|XP_003528212.1|
Domains
14
LotjaGi1g1v0191200.1
– DNA/RNA helicase protein; TAIR: AT5G07810.1 SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein; Swiss-Prot: sp|Q6NZP1|ZRAB3_MOUSE DNA annealing helicase and endonuclease ZRANB3; TrEMBL-Plants: tr|V7CJZ0|V7CJZ0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0191200
Domains
24
LotjaGi4g1v0250000.1
– HNH endonuclease; TAIR: AT3G47490.1 HNH endonuclease; Swiss-Prot: sp|Q96F46|I17RA_HUMAN Interleukin-17 receptor A; TrEMBL-Plants: tr|I3T7Q3|I3T7Q3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0250000
Domains
9

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 16.67