Domain Predictions — View

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cd00085

Source: CDD

Description

HNHc

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 12

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0322239.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: zinc finger Ran-binding domain-containing protein 3-like [Glycine max] gi\|356519100\|ref\|XP_003528212.1\|	Domains G3DSA:3.40.50.300 IPR001650 IPR002711 IPR027417 PF00271 PF01844 PS51194 PTHR10799 PTHR10799:SF741 SM00490 SSF52540 cd00079 cd00085 mobidb-lite	14
Lj0g3v0322239.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: zinc finger Ran-binding domain-containing protein 3-like [Glycine max] gi\|356519100\|ref\|XP_003528212.1\|	Domains G3DSA:3.40.50.300 IPR001650 IPR002711 IPR027417 PF00271 PF01844 PS51194 PTHR10799 PTHR10799:SF741 SM00490 SSF52540 cd00079 cd00085 mobidb-lite	14
Lj0g3v0322239.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: zinc finger Ran-binding domain-containing protein 3-like [Glycine max] gi\|356519100\|ref\|XP_003528212.1\|	Domains Coil G3DSA:3.40.50.300 IPR000330 IPR001650 IPR002711 IPR014001 IPR027417 PF00176 PF00271 PF01844 PS51192 PS51194 PTHR10799 PTHR10799:SF741 SM00487 SM00490 SSF52540 cd00046 cd00079 cd00085 mobidb-lite	21
Lj0g3v0322239.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: zinc finger Ran-binding domain-containing protein 3-like [Glycine max] gi\|356519100\|ref\|XP_003528212.1\|	Domains G3DSA:3.40.50.300 IPR001650 IPR002711 IPR027417 PF00271 PF01844 PS51194 PTHR10799 PTHR10799:SF741 SM00490 SSF52540 cd00079 cd00085 mobidb-lite	14
Lj1g3v3964650.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	HNH endonuclease [Theobroma cacao] gi\|508719307\|gb\|EOY11204.1\|	Domains IPR003615 IPR029471 PF14279 PTHR33877 PTHR33877:SF2 SM00507 cd00085	7
Lj4g3v1660960.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Os10g0335200 [Oryza sativa Japonica Group] gi\|115481558\|ref\|NP_001064372.1\|	Domains PTHR33427 cd00085 mobidb-lite	4
Lj4g3v1660960.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Os10g0335200 [Oryza sativa Japonica Group] gi\|115481558\|ref\|NP_001064372.1\|	Domains PTHR33427 cd00085 mobidb-lite	4
LotjaGi1g1v0191200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA/RNA helicase protein; TAIR: AT5G07810.1 SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein; Swiss-Prot: sp\|Q6NZP1\|ZRAB3_MOUSE DNA annealing helicase and endonuclease ZRANB3; TrEMBL-Plants: tr\|V7CJZ0\|V7CJZ0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0191200	Domains Coil G3DSA:3.40.50.10810 G3DSA:3.40.50.300 IPR000330 IPR001650 IPR002711 IPR003615 IPR014001 IPR027417 IPR038718 PF00176 PF00271 PF01844 PS51192 PS51194 PTHR45766 PTHR45766:SF5 SM00487 SM00490 SSF52540 cd00085 cd18010 cd18793 mobidb-lite	24
LotjaGi1g1v0641100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	HNH endonuclease; TAIR: AT2G23840.1 HNH endonuclease; Swiss-Prot: sp\|Q6NKI3\|CAS9_CORDI CRISPR-associated endonuclease Cas9; TrEMBL-Plants: tr\|I3T8T8\|I3T8T8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0641100	Domains G3DSA:3.30.40.60 IPR003615 IPR029471 PF14279 PTHR33877 PTHR33877:SF2 SM00507 cd00085	8
LotjaGi1g1v0641100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	HNH endonuclease; TAIR: AT2G23840.1 HNH endonuclease; Swiss-Prot: sp\|Q6NKI3\|CAS9_CORDI CRISPR-associated endonuclease Cas9; TrEMBL-Plants: tr\|I3T8T8\|I3T8T8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0641100	Domains G3DSA:3.30.40.60 IPR003615 IPR029471 PF14279 PTHR33877 PTHR33877:SF2 SM00507 cd00085	8
LotjaGi4g1v0250000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	HNH endonuclease; TAIR: AT3G47490.1 HNH endonuclease; Swiss-Prot: sp\|Q96F46\|I17RA_HUMAN Interleukin-17 receptor A; TrEMBL-Plants: tr\|I3T7Q3\|I3T7Q3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0250000	Domains G3DSA:3.30.40.60 IPR002711 IPR003615 PF01844 PTHR33427 PTHR33427:SF3 SM00507 cd00085 mobidb-lite	9
LotjaGi4g1v0251700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	HNH endonuclease family protein, expressed; TAIR: AT1G18680.1 HNH endonuclease domain-containing protein; Swiss-Prot: sp\|B0JWW6\|DXR_MICAN 1-deoxy-D-xylulose 5-phosphate reductoisomerase; TrEMBL-Plants: tr\|A0A072UQM8\|A0A072UQM8_MEDTR HNH endonuclease domain protein; Found in the gene: LotjaGi4g1v0251700	Domains G3DSA:3.30.40.60 IPR003615 PTHR33427 PTHR33427:SF1 cd00085 mobidb-lite	6

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	8.33