Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0132200 |
| Transcript ID | LotjaGi2g1v0132200.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DNA repair helicase; TAIR: AT1G03190.1 RAD3-like DNA-binding helicase protein; Swiss-Prot: sp|Q8W4M7|ERCC2_ARATH DNA repair helicase XPD; TrEMBL-Plants: tr|A0A0L9VKH8|A0A0L9VKH8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0132200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:47989290..47997874) extracted from Lotus japonicus Gifu genome v1.2.
TTGTACACCCCTAGGGAGAATTGAGTCCTTGAAGTACTGAGGACTGGTTTGTTTTAACAGGGAAATTAGCATTATTGCTG CTAAACCCTAAACACTTTCACGGTGGTGCTTCATGTTCCACCATCTTCACCATCTCTGATCTCCAAACCCTAAACACACA CACACTCACCTCAAACCCTAACAATGAAGTTCCAAATCGAGGACGTAACAATATACTTCCCCTACGACAACATCTACCCA GAACAATACTCCTACATGGTCGAACTCAAGCGAGCCCTCGACGCCAAAGGCCACTGCCTCCTCGAGATGCCAACCGGCAC CGGCAAAACCATCGCACTTCTCTCCCTCATCACCAGCTACGTCCTCTCCAAACCCCAATCGCCGTTGAAGCTTCTCTACT GCACCCGCACGGTTCACGAGATGGAGAAAACCCTCGCCGAGCTTCGGCTCCTTCATGATTACCAGACGCGATTCCTCGGG CCTGCGGCGACTATTCTTGCGTTGGGTCTCTCGTCTCGGAAGAATCTCTGTGTTAATTCCCGGGTTCTTGCTGCGGAGAA TCGGGATTCGGTTGATGCTGGGTGCCGGAAATTGACGGCTAGCTGGGTTAGGGCGGTTGCTGCGGAGAATCCCGCGGTGC CGAGTTGTGAGTTCTTTGAGCAGTATGAGAGAGCTGGGTCTGGTGCGGTTTTGCCGCCTGGGGTTTACACTTTGCAGGTT TGGGTTTTGTGATTGTGTTAGGAATTTGAGTTTGATTGGTTGGAGTGCTGGATTTCGATTCGTTTTGGGTTCTCCCTCCC CTATTCTGAAATGAAGATTGTTAGAACAAAAAAAATCAGTTTTGTTCGGTTTTGAATTGATCCATTTTGGATGTTATGTC CCTAAGTTCTGAAATGTTTGAACTCTGATGAAAAAAAAACATCAGTGATTTGATTTTGATCGGCGTGGAAGCTGCCTGAG TTTGAAATATTTGAATTTTTGAACTGGTTGAATGAAAATTTTGAACTAGGTTGGTTCAGGATGTTTTCTGATACTAAAAC GTTTGAATTGTAAGTGTGGTGGGCTGAAAGATTTGATTTTTGATCAATTTTGAATGATCCCTGATTCTAAAATGCTTAAC TTTGAGTGCGATTGAATTAAATTTTGATATTGTATATTTTCCAATGTTCTATTGGGGATGCTTGATTTTGATGGGTTTTG GATGTTCCCTCTGGAATTCTGAGATGTTTGAAATTTTTATTGAAGAGATTTCAATTTCAATCTTTTTTGGTTGTTTCCTG ATTCTGAAAAATTTGGACTTTTTTGAGTGGGGTTGACTGAAGGATTCAATTTTGAGCAGTTTACTATGGTCCCTAATACT TTAAAATGTTTAAACTTTGATTGTGGTTGACTTAATTTTGATTTTGTTCATTTTCAGATTGATCTGTATGATTGTGCTTT TTGGTTCGTACCATAATTTCTAAAATGCTTGAACTTGAATGTGTATATATGATTGTAGGATCTGAGAGCGTTTGGGAAGG AGAAGGGCTGGTGTCCTTACTATCTGGCACGGCATATGGTGCAGTTTGCCAATGTGGTGGTGTATAGCTATCAGTATTTG CTTGATCCGAAGGTGGCTGGCATAATATCTAAGGAAATGCAGAAAGAATGTGTTGTTGTATTTGATGAAGCTCATAATAT CGATAATGTCTGTATTGAAGCGCTTAGTGTGAGTGTGAGGAGGCAGACTATTGAAGGTGCTAGAAGAAATTTAACAAGGA TGCGCCAAGAAATTGACAAGTATGTGTGTTTCTAGCTTTCTCCTCCGATGTTTTATGGTTCCAAGTTTTCACCATCAATT TCTTCAATAGAGAAGAAGAGGGTATAATATATTTTAAAAAATAGGGGTTCTTTTGATTGTGGCAACATTTTATAGAATAT GCAAGTTACTTTTGTAATCCTGCAATTGTTTGGTGGATTCATAAAATTGATCAAATTTTGTCTAGTTGTGACACTTGAAA TTACTTTGCCTCTCCCTTCACAATAGTCTCAATTTTGCTTTATTTTCCATTTAGTTCCCATATCTGAAATTTGATTCAGA TTCTCGTAACTATTTTGAACTGGTAGGAAGGTTCAAGGCCACTGATGCAGGTAGACTCCGTGCTGAATACAACCGGCTTG TCGAGGGTTTGGCACTAAGAGGAGACCTGCCTGGTATTTAGGATGTCTCTTTTGTTAATGATGTCTTACTGTTACCTCTA GTCATCACTAACTGGAACTTATTTTTCTTTACATAGCCACGGATGGATGGCTTGCAAATCCAGCCTTGCCTGATGATATA CTAAAGGAGGCTGTACCTGGAAATATTCGTCGGGCTGAGCATTTTATTCATGTTTTACGTAGATTAGTTCAATACTTTGA GGGGCGCATGGAAACAGAGAATGTGGAGAAGGAAAGCCCTGTTGGCTTTGTTACCTCTATTCTTAACCATGCTGGAATTG ACCAAAAGACACTGAAGTTTTGTTATGATCGGCTTCATTCATTAATGATGACATTGGAAATTACAGATACTGATGAGTTC CTTCATATCCAAAGTATATGTGATTTTGCCACACTTGTTGGTACATATGCTCGTGGTTTTTCTATTATAATTGAACCTTT TGATGAGAGAATGCCACATATTCCTGATCCTGTATTGCAGGTTTGATTTGTATCAACTCTATCAGTTTTTTAATGTAATA TTAGTTCTTTGTTGTTAGATTTATTTATTACATACGTGTATTTATGTTTCTTTTCTTATTTTTCTTCACCAATTACATTT CAGCTTTGTTGCCATGATGCTTCTCTTGCCATAAAACCAGTTTTTGAGCGATTTCAGTCAGTTGTTATTACATCTGGCAC ACTAAGCCCTATAGATTTGTACCCTCGCCTGTTGAATTTCAACCCTGTTGTCAGTCGAAGTTTTACAATGTCCTTGACCA GAGATTGCATATGCCCTATGGTGCTTACCCGTGGCAGGTATTCCCATTATTTGCTCTTCCATATTTTTGAGCAGATCTTT TATTTCCTTGAAAAACGCCTCTTTCACTTTCTGCTTTGTTGTTTTTTAAATGCCTAATAGATTTTTTGTTTCAGTGATCA GCTTCCAGTCAGCACCAAATTTGATATGAGAAGTGATCTAGGTGTAGTGAGGAATTATGGACGGCTCTTATTGGAGATGG CTTCAGTTGTTCCAGATGGTATTGTGTGTTTCTTTGTCAGTTACTCATATATGGATGGGATAGTCAATAGCTGGAATGAA AATGGAATTTTAAAGGTAAGCGAACTAGTCAACTTCATTGATTTCCATAGTACTTATAGTAGTGTGCATTGTCTTGTTTG GGGCTGATAAATGCATCTCTTTTGCAGGAAATAATGCAGCATAAGCTTGTCTTTATTGAGACTCAGGATGTGGTAGAAAC TACGTTGGCTCTTGACAACTACCGCAAGGCTTGTGATTGTGGAAGAGGTGCTATATTTTTTTCTGTTGCTAGGTAAGAAA ATGTAAACATATCCTCCTGGGTTTTAAAACTTTTTTGTAATACTTGTTAATCAAACTACACTCTCTATTCAACTAAAAGG AAAATATATACTTTGTATGGCAATATATCAATTGGCATATGTAGCTCCAGCAGACCAATAGGATATTGTGGGCATAGAAT GTTCTGTTGACATGAATTTGTATGATATTGCAAACTCAATTTTTGCGTCCTACTACTTAATCCGACATTTGGACTATAGG GTTTATCTTTATGTGTTACACGCCTTGGTTATTGTATATTAAAGCCAAACGTTCATGATATTTCCTGCAGTGTTGCTATG TTTAACAACTGAAACCTCTTCTGTCTTTTATGTGTTTACGATGACTAGTTTTGTCACTTCAAAACTCCTTTTTCTTAAGT TGTAAATTAAACTAAGATCTTGAGGTTTGAACTCTTTATCTATAGCTCTTTGCTTTTTTACATCCATGTTCATATGTACT ACCTGCTTCCTTCCTTGATGCGCAGGTGACAAAATCTAGATTTTTCAGGTTCTAGAAATTGAATTAGCATGTGTAACTCC CCCTGGTAAAAAAATGGATCATTTCCCTAAATAGAATTAAATTTAACATCTGTAACTCCCCCTTTCAAGATTGTTCAAAA CTTACTTTTGCAGCTTCTTGGGAGAGCTTTTGTTAAATAAAATGATCATTTCCCAAAAAAAGAAAGTATCAAATCAGCTG CATGGAGCAAATACTGCCTTTGTGTTTTGTCAAAACCTAATCTTTGGAGATGCCATTTAGATCCAACTCCTCTTTAATCG TTTTACATGAATTTTTTCTTGATCTTACTCCATTAACTATTATGTTATCTTTCATCTTTTCTAAGGCTTGTATTGTTCTT CACACATGGCTGAACCATCTCAGGAGCAGTTGACTCTGCGTTCTTTTTCTTGATGAATGCAATTACTACTTTCTCTCTAA TACCTTCATCCATGATCATATTCTTGTATGTTTACTCATAGATTTCAACTTTCGCACCTCTACAAGATTAAGCCTATGCT CTTGTTGGCAATTTACTACCCGTAATTAAATACCATAAAGCATAGTTGGTCTTATGAGTGTGCAGTATAGTTATTCTTTA AGCTTGATTGACACCTTTTAATCACAAGAACACTTGGAAGTATCCTTCCATTTCATCCACCCAACTTAACCCTGTGATAT GTATTTTCCTTTATCTCTCCAGTCTGCATTACTTTTTTTGGTTATAGAAGAGAGAATGTCTCTTCTCATTTACTAATTGG GCTCTCATCTAGTGCTGTATTTTTGTTTCTTACTATACCTGTCTATCATGTTCATCAAAGCCTAAGAAGAATATATGTAC TCTTTGCAGAGGAAAGGTTGCTGAAGGTATAGATTTTGATCGACATTATGGCAGACTAGTAATCATGTTTGGTGTTCCTT TTCAATACACATTAAGCAAGTGAGTTACATGAACTATTGTGTTTCTCAATCTTTTATTCTTATCAAGCTCGTGGAGGTTA AATTGCTCGTCGCAGAACTTTTAAGAGTAGTAAACTTTCAGGATTTTGCTTGCACGCTTGGAATACCTCCGGGATACTTT TCAAATTAAGGAAGGAGATTTTCTGACTTTTGATGCTTTAGTATGACTCTCTCTCTACCTCAAAATGATTGCTTGATAAT TTGGTAAATGGATTCCTAAACTCTGTGAAATTAGATCCTTGGTAACATCGGTGTTCTTATGCAGAGACAAGCTGCTCAGT GTGTGGGTCGTGTAATACGTTCAAAGGCTGATTATGGGATGATGATTTTTGCGGACAAAAGGTTAGTGTAAAAACTTCTG AAATTGCTTTAATATGATTGACCCTCTGAATGTTTGCACCTTTCTATTTAAAAAAAACAACACACTCTTCACCTGTCATC CCGAGATGGACTTTGAAGTTTGAAGTTACTGACCTCCTAATATTGAATGGCTTATGAGAAGAATCTTGACAAGCTATAAA GTCCGGTTTGTTAAGCTAATAAAGAAATATGTTTGTTCAGGGCCATGGCAATTTTTAACCCAATGTAATCAAATCAACTG TAGGCGTAAATCGTGTAATCAACAAAAACTGTGATGTTACTGTAAATATATGATTATTATTATTATAGTTTCTGTACATC ATTGGAGATAACCAAGTTGAACTTTGAGAGTTTTTTATATATAGTAATCCTTACCTATTTTGCTGTTACTTGGGTAAAGC ACCAAATAGATCTCTTTTTCTTTTCTTTATTGTGAACACACCTAGTTACTTCCAGAATGTGTGATGTAATACTAGAAGAT GTACTGAGCTTATCTATCTGGGATGACTGCATCAATTATGGTTTTGGTTTCTACTTAATTTTTCTCTTCGACAGAGTTGT GACTCAAACTGCATGGTTGGTTATTACTGCACGCAGGTATAGTCGTCATGACAAACGGTCCAAATTGCCGGGTTGGATAC TCTCTCATTTACGTGATGCGCACCTAAACTTGAGCACTGACATGGCTTTGCATATAGCGCGTGAGGTTGGTCCACAACTG TTTTGATGTTTGTTGAGTTACTTTTATTCATGTCATTATTCTCGACGCTACATTGGTCAACATTTTTTTGGTTTATGTTC AGTTCCTAGTATCCATTTCTCTGTCGATTATTTCCCATCAGATTGATTATGCTGTGCTATTTTGTGTGAAGTTATTGTCT TTAATTGCCTAGTAAGAATTTGAGTTCCAAAGTATCAGCGTTAGACCTTCCAGCATTCCAGTACACTTGATCGAATGATC TTGTAAATCTAAAAACCAAAGTTTCAGATTCAATAGTAGATATAATGTGGCACTATTTGATGCTGGAACAAAGTTACAAC AGTGGTTATGGCCTTGTTAGAGTTGCATGTTTATCTAATAATATGATTGCATAATGACAGTCTTCTTCTGTTGGATGCAG TTCCTCAGGAAAATGGCTCAACCATATGATAAGACTGGTGGCACTGGCAGGAAAACCTTGTTGTCCCAGGAAGACTTGGA GAAGATGATGGTTGAGGGAAGCATGAATGATATTTTGTATTGAGAGCCTACTTGCACTAACCTACAAGTGAGGTGAACTG GGGTTGGGGTGGCTTTCACCTATATATTAATTCCATATGCAGTTTCTCATACTCGCAGAAATACAAGTGTCATTTTGATG TGACGGTGCCATGGATCAATCTATTATGACGGGGAGATACACCACTTTAGCATCGAAGGTTCTATTTTAGAAATTGGAAA AATCTTAAAATTCTTTAATGTACTTCATTAAATTATGCTTTGTCAAGGCTTGTAGTCGGTTTATCAAATTCAGGTGAGTA TTTTTATGCATGTTTACCATGGGTTCCATTGTTTAACTCATTTTCATTTTAGTTGTTTATTAAGTATTGGGGTTGGCTAA ATGGCTCATGAGGGTTGCTTAACCCCACCCGTCAGTGGCGGAGCTAGCTTTTTAGTTTCAGGGTGGCCAAGACTAAAGAA CATATAATTTATAATTTAGAATTTATAGTAAAATTATAAATTTTCACATACAAAATATACGCAATAAATTAAAGAGGTGG AACAATTTTAATATATTCATATATAGCTTTCTCTTCCATCTCATTTTCTTCTCTCAGTTCTCTTTTCTTAACATATTACT TATCATGTCTATTACTTAATTTTCTCTATTTTATTTATATAAGTCTTTAAAATTGGAGGTGAAACTAGTGTGAGCAAAAT ATTTTTCAAATACAATATCTAAACTATTTTTCATAGTAATTGCTACAATCAATTAAACATTTCATTTTACTATAAAAGGA CATCTTATTGAGGTAGCTAATTATTAAGTTTACAAAAATGCCAATACTAAGTTATAAATCCAACAAGTTCTAACTGAAAA AATTCCAACAAGTTATTATCAACTGTTTAAAATAATGATCCAATGAAGGGTAAAAGCAATGAGAGCAAATCATCTGTCTC ATGTTCCTATCCTATTTCCTGTCTCTCCAGTTAAAACTTGACATGTCATTTACAATGAACACGTCACCAGTTTGTTATTC TATCCCCGTTAACATGCCTCCGTTAATTGAAACACAATAGATCAACTCAACCTCTGATAATTCTGTACCAAATGTTTCAT CCTCTGCCAATAATCCCCATGTAAGTTTAATCCATCATGGTATCAAAAAATAAAAACATGAATTGTGCTTGGTAAACAGA ACAAATGAACAACTGAGAAAAATAATAAAGAAAGAAAGAATAATCTCCATGTTTCATTTTTACAGGATGATTCAATCCCC TTTTTCCTGTGAATCAGAGACCTTTCTTTTCTGCTGCAGATCCATAAGCGTCTCTCCCTCCGTCAAGCTTCATCTTTGTT GCAGATCCATTACCGCTCCCCACCGTATCGGACCATCAAAAGCTTCTTTGGCGCTTATCATTCTCTCCCTGTGGGATTCA CTCAATCGTTGAACTGCATCATCCCCTCATGTCTTTCTCACTACAATTGCAGATCCATAAGCATTAACCATCACGCTCCC CTTCACGACATCACTTAGCCCAGAATCAGAACTGATACTCCTCTGTGCCGGAGCGGCCACACACCGCCATGGCTTAGGTG TGGGTGGCACTGTGGCAGCAGCCAAGGAAAGGTCTGAAGAGCCCAACTTAACGCTGTTAGTGATAGGGTTAGAATACTAA GTTAATGATGTGTCATGTTTAAATGACATGTCAAGTTTTAATTGGAGAGACAGGAAATAGGACAGGAACATGAGACAGAT GATTTGCTCTCAAAAGCAATACACATAATGGCCATTTCTAGAATTATACACACTAGGCTGTAAATAAACTATTTATTCAG GGTGGGGCCATGACCCTTATGGGTCACCCCCTCCCTCCGCCACTGACCCCAGTGGACCAATATAATTATTTATAGATAAA TTAATAAATAAAATATGAAAATTTTATTTCACTTATTTTAAATGTGATTGATTCACCTAAGACCATGATTTATTTAACCT AAACTTTTCAATTTTTCATTTAGAC
CDS sequence (LotjaGi2g1v0132200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGTTCCAAATCGAGGACGTAACAATATACTTCCCCTACGACAACATCTACCCAGAACAATACTCCTACATGGTCGA ACTCAAGCGAGCCCTCGACGCCAAAGGCCACTGCCTCCTCGAGATGCCAACCGGCACCGGCAAAACCATCGCACTTCTCT CCCTCATCACCAGCTACGTCCTCTCCAAACCCCAATCGCCGTTGAAGCTTCTCTACTGCACCCGCACGGTTCACGAGATG GAGAAAACCCTCGCCGAGCTTCGGCTCCTTCATGATTACCAGACGCGATTCCTCGGGCCTGCGGCGACTATTCTTGCGTT GGGTCTCTCGTCTCGGAAGAATCTCTGTGTTAATTCCCGGGTTCTTGCTGCGGAGAATCGGGATTCGGTTGATGCTGGGT GCCGGAAATTGACGGCTAGCTGGGTTAGGGCGGTTGCTGCGGAGAATCCCGCGGTGCCGAGTTGTGAGTTCTTTGAGCAG TATGAGAGAGCTGGGTCTGGTGCGGTTTTGCCGCCTGGGGTTTACACTTTGCAGGATCTGAGAGCGTTTGGGAAGGAGAA GGGCTGGTGTCCTTACTATCTGGCACGGCATATGGTGCAGTTTGCCAATGTGGTGGTGTATAGCTATCAGTATTTGCTTG ATCCGAAGGTGGCTGGCATAATATCTAAGGAAATGCAGAAAGAATGTGTTGTTGTATTTGATGAAGCTCATAATATCGAT AATGTCTGTATTGAAGCGCTTAGTGTGAGTGTGAGGAGGCAGACTATTGAAGGTGCTAGAAGAAATTTAACAAGGATGCG CCAAGAAATTGACAAGTTCAAGGCCACTGATGCAGGTAGACTCCGTGCTGAATACAACCGGCTTGTCGAGGGTTTGGCAC TAAGAGGAGACCTGCCTGCCACGGATGGATGGCTTGCAAATCCAGCCTTGCCTGATGATATACTAAAGGAGGCTGTACCT GGAAATATTCGTCGGGCTGAGCATTTTATTCATGTTTTACGTAGATTAGTTCAATACTTTGAGGGGCGCATGGAAACAGA GAATGTGGAGAAGGAAAGCCCTGTTGGCTTTGTTACCTCTATTCTTAACCATGCTGGAATTGACCAAAAGACACTGAAGT TTTGTTATGATCGGCTTCATTCATTAATGATGACATTGGAAATTACAGATACTGATGAGTTCCTTCATATCCAAAGTATA TGTGATTTTGCCACACTTGTTGGTACATATGCTCGTGGTTTTTCTATTATAATTGAACCTTTTGATGAGAGAATGCCACA TATTCCTGATCCTGTATTGCAGCTTTGTTGCCATGATGCTTCTCTTGCCATAAAACCAGTTTTTGAGCGATTTCAGTCAG TTGTTATTACATCTGGCACACTAAGCCCTATAGATTTGTACCCTCGCCTGTTGAATTTCAACCCTGTTGTCAGTCGAAGT TTTACAATGTCCTTGACCAGAGATTGCATATGCCCTATGGTGCTTACCCGTGGCAGTGATCAGCTTCCAGTCAGCACCAA ATTTGATATGAGAAGTGATCTAGGTGTAGTGAGGAATTATGGACGGCTCTTATTGGAGATGGCTTCAGTTGTTCCAGATG GTATTGTGTGTTTCTTTGTCAGTTACTCATATATGGATGGGATAGTCAATAGCTGGAATGAAAATGGAATTTTAAAGGAA ATAATGCAGCATAAGCTTGTCTTTATTGAGACTCAGGATGTGGTAGAAACTACGTTGGCTCTTGACAACTACCGCAAGGC TTGTGATTGTGGAAGAGGTGCTATATTTTTTTCTGTTGCTAGAGGAAAGGTTGCTGAAGGTATAGATTTTGATCGACATT ATGGCAGACTAGTAATCATGTTTGGTGTTCCTTTTCAATACACATTAAGCAAGATTTTGCTTGCACGCTTGGAATACCTC CGGGATACTTTTCAAATTAAGGAAGGAGATTTTCTGACTTTTGATGCTTTAAGACAAGCTGCTCAGTGTGTGGGTCGTGT AATACGTTCAAAGGCTGATTATGGGATGATGATTTTTGCGGACAAAAGGTATAGTCGTCATGACAAACGGTCCAAATTGC CGGGTTGGATACTCTCTCATTTACGTGATGCGCACCTAAACTTGAGCACTGACATGGCTTTGCATATAGCGCGTGAGTTC CTCAGGAAAATGGCTCAACCATATGATAAGACTGGTGGCACTGGCAGGAAAACCTTGTTGTCCCAGGAAGACTTGGAGAA GATGATGGTTGAGGGAAGCATGAATGATATTTTGTATTGA
Protein sequence (LotjaGi2g1v0132200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKFQIEDVTIYFPYDNIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPQSPLKLLYCTRTVHEM EKTLAELRLLHDYQTRFLGPAATILALGLSSRKNLCVNSRVLAAENRDSVDAGCRKLTASWVRAVAAENPAVPSCEFFEQ YERAGSGAVLPPGVYTLQDLRAFGKEKGWCPYYLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKECVVVFDEAHNID NVCIEALSVSVRRQTIEGARRNLTRMRQEIDKFKATDAGRLRAEYNRLVEGLALRGDLPATDGWLANPALPDDILKEAVP GNIRRAEHFIHVLRRLVQYFEGRMETENVEKESPVGFVTSILNHAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQSI CDFATLVGTYARGFSIIIEPFDERMPHIPDPVLQLCCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRS FTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDLGVVRNYGRLLLEMASVVPDGIVCFFVSYSYMDGIVNSWNENGILKE IMQHKLVFIETQDVVETTLALDNYRKACDCGRGAIFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL RDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF LRKMAQPYDKTGGTGRKTLLSQEDLEKMMVEGSMNDILY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 749 | 747 | 0.0 | – | |
| PANTHER | 3 | 749 | 747 | 0.0 | ||
| ProSiteProfiles | 7 | 285 | 279 | 38.503 | ||
| PRINTS | 8 | 25 | 18 | 1.8E-84 | ||
| SMART | 8 | 280 | 273 | 9.5E-126 | ||
| TIGRFAM | 9 | 708 | 700 | 3.9E-236 | ||
| Gene3D | 15 | 285 | 271 | 9.6E-54 | – | |
| CDD | 27 | 240 | 214 | 3.97117E-43 | – | |
| SUPERFAMILY | 31 | 678 | 648 | 1.5E-13 | ||
| Pfam | 72 | 255 | 184 | 3.3E-51 | ||
| Coils | 256 | 276 | 21 | - | – | |
| Pfam | 270 | 412 | 143 | 4.7E-27 | ||
| PRINTS | 273 | 292 | 20 | 1.8E-84 | ||
| PRINTS | 308 | 326 | 19 | 1.8E-84 | ||
| Gene3D | 325 | 439 | 115 | 2.1E-5 | – | |
| PRINTS | 333 | 354 | 22 | 1.8E-84 | ||
| PRINTS | 372 | 394 | 23 | 1.8E-84 | ||
| PRINTS | 403 | 421 | 19 | 1.8E-84 | ||
| Gene3D | 440 | 472 | 33 | 2.1E-5 | – | |
| CDD | 451 | 480 | 30 | 4.5938E-10 | – | |
| CDD | 488 | 684 | 197 | 5.44676E-67 | – | |
| PRINTS | 492 | 509 | 18 | 1.8E-84 | ||
| Gene3D | 500 | 697 | 198 | 1.1E-38 | – | |
| Pfam | 524 | 697 | 174 | 3.3E-41 | ||
| SMART | 542 | 686 | 145 | 5.5E-71 | ||
| PRINTS | 636 | 658 | 23 | 1.8E-84 | ||
| PRINTS | 707 | 727 | 21 | 1.8E-84 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA helicase activity | Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA helix. | ||
| Molecular function | Helicase activity | Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA or RNA helix. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Nucleobase-containing compound metabolic process | Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids. | ||
| Biological process | Nucleotide-excision repair | A DNA repair process in which a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts). | ||
| Molecular function | Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | Catalysis of the hydrolysis of any acid anhydride which contains phosphorus. |
Expression pattern of LotjaGi2g1v0132200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…