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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0054100 |
| Transcript ID | LotjaGi3g1v0054100.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ethylene receptor; TAIR: AT1G66340.1 Signal transduction histidine kinase, hybrid-type, ethylene sensor; Swiss-Prot: sp|Q9M7M1|ETR1_PRUPE Ethylene receptor; TrEMBL-Plants: tr|K7LB32|K7LB32_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0054100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:5633226..5637461) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAATCCTGCAATTGTATTGATCCGCAATGGCCAGCTGATGAATTGTTGATGAGATACCAGTATATCTCAGATTTCTT CATTGCCCTTGCTTATTTCTCGATCCCTCTCGAGCTTATCTACTTTGTTAAGAAATCAGCAGTGTTTCCATATAGATGGG TCCTTGTTCAGTTTGGTGCTTTCATAGTTTTATGTGGAGCAACACATCTAATTAATTTGTGGACCTTCACAATCCATTCA AGAACTGTGGCAGTTGTAATGACCATTGCTAAAATTTTAACCGCTGTGGTGTCATGTGCCACCGCCCTTATGCTTGTACA TATTATTCCTGATTTATTAAGTGCTAAGACTAGAGAAATGTTTTTGAAGAACAAGGCTGCTGAGCTTGATAGAGAAGTTG GCCTGATTCGGACGCAGGAAGAAACTGGTCGACATGTTAGGATGTTGACTCATGAGATTAGAAGCACACTTGACAGACAC ACAATACTGAAAACGACTCTTGTTGAACTGGGTAGAACTTTAGGACTGGAGGAGTGTGCCTTATGGATGCCGACACGTAC GGGGTTGGAGCTTCAACTGTCATACACGTTGCGGCAGCAGAATCCAGTTGGATATACAGTACCCATTCATCATCCTGTGA TCAACCAAGTATTTAGCAGCAACCGTGCGGTAATAATTTCACCTAATTGTCCTGTTGCCAGATTGCGACCTCACACTGGA AAATACATAGCTGGGTCAGTAGTAGCTGTTCGGGTTCCTCTCCTACATCTTTCTAATTTCCAAATATATGATTGGCCTGA GGTTTCAACTAGAAACTATGCACTGATGGTATTGATGATTCCATCAGATAGTGCCAGGCAATGGCACGTGCATGAGTTAG AGCTGGTTGAGGTAGTTGCTGATCAGGTTAGCAATTTGCCATTTCTGTTCAATTGCCTTTCTAGCATTAGTCTTTAATAT CATTTTCTTTATCTTTATTAACCCAGCTGTTTGACATGGAATCATGGATACGTTTGTCATTCATTACTTTTCATTCTGAT GGTTTATCTTTACTGTTTGTTTCTTGCAAATATGGACACAATCATTAAGAATTGAATTTTACTATTTGTATTTAGTTTAA CCAACATACACTTTTGTGAATTAACTTCCTCAGGGGAAATTGTAAGTTGTGTTTGTTTTCTAAATTCATGTCAATGTGTA GTTGTGTACTATCTTTCCATGATTAATCTTTATTAATGATAATCAAGGTAAACAGGAGAAAATCTGTCTTAATAACTATC CTGATATTACAGCAGTATATACAAGAGAATAGAATCTTATATTCGTCCTGAAATAAGATATGTTGTAGGAACCATCAGTT AGCGAACTTCATTAGTTTATCACTAGAATATACCTTCAAATCACTTATTAAAATTGTCTCTTATACCAGGTAGCCGTTGC TCTTTCGCATGCTGCAATCTTAGAAGAATCAATGAGGGCAAGGGATCTGCTAATGGAGCAGAATATTGCACTTGATCTGG CAAGAAGAGAAGCAGAAACTGCAATTCGGGCTCGCAATGATTTTTTGGCTGTTATGAATCACGAGATGAGAACTCCCATG CATGCAATTATTGCACTATCTTCATTGTTACAGGAAACAGAGCTGACTTCTGAGCAGCGACTGATGGTGGAGACAATATT GAAAAGCAGCAATTTATTGGCTACTTTGATAAATGATGTTTTGGATCTTTCACGGCTTGAAGATGGCAGTTTTCAACTTG AAGCAGCAACATTTAATCTCCATTCATTGTTTAGAGAGGTGAAATTTTCATTGTAAATTCTAAAATTCAGTTATATTAGT CTGACTTGTCGAGGTGATCTTGAGTTCTTTAGAAACTTGATGTTGCCATCTCTGTTTACAGCTCTGTTTTTATTCTGATT GCAGGTCCTTAACCTGATTAAGCCTGTTGCATCTGTTAAAAAGTTGTCACTCACTTTACATTTAGCATCAGATTTGCCAG TGTATACCATTGGTGATGAAAAGCGTCTGATGCAAACTATGCTGAATGTTGTTGGTAATGCCGTGAAATTCTCAAAAGAG GGCAGCATTTCCATCACTGCTTTTGTTGCAAAGCCAGAATCCTTCAGGGATATCCGAACTCCTGACTTCCTACCAGTGCC AAGTGATGGCTACTTTTATTTGCGAGTACAGGTTTGTTTCTTGAAGTTTAATCAATACTCTCATGTCTTGGGTTGAACCG TTGAAATATCATCTGTTATCTAACTTCAATGCTGGACTACAATTTTTCCACATTATAGGTAAAAGATTCAGGATCAGGAA TTAATCCACAAGATATCCCAACGTTATTCACTAAGTTTGCACAAAACCAATCACCAGCAGCAAAAAGTTCTGCTGGAAAT GGACTTGGCCTTGCAATTAGTAAGAGGTACTATTCTTGTATGTTTACCAGCTTAAACTAGGGTGTGAAACATAATATTTT TTCTCTATTCCTTGGGATCTTTCCAACATAATTGGAATGAAGCTCTTGAAATTCCTGTCTAAGATTTTTATGTTGATTTT TTCTTTCAAATTGTGAGCAGGTTTGTAAATCTCATGGAAGGGGATATTTGGATTGAAAGCGAAGGTATTGGTAAAGGATG TACAGTTACCTTTGTCGTAAAACTTGGGATTCCAGACCGATCAAATGAATTTAAACTACCATTTGCACCTAAAGTTCCAG TAAACCATGGATCTGCAAACTTTGCAGGGCTCAAAGTACTTGTCATGGATGATAATGGGTAAGTGACATAGCTTTATTTC TGTTTCTTCAGTTCTGAAATTTGTTACTATATCACTTATCAATTAGTTAAGTAAAAGTAAAACCATTAGAATTCTGGTGA TTTCATTGAAAAGTAAACTTAGTTTGATTTCTTATGTTAAACCCTACTTCTCAGGTCCCAATTATGTTCTTGAGTGCATG ATACTGCTGAATGCTGATTCCAAAGTAAATAGGTCTAAACATCAAGGTTTATATTGTTAAACTTATAATTTACAGTCTCT AAAAGTGTAGGTTCCGGACTTTAGAACATCCTATCAATGTTAGAGAACTTTAATGTAGATATTGCATGTATTCTTCATAA AAAAAATTCGTATCCATTTCATGTTTAGTTTTATTTAGTTAGACCAGATATTAGGTGGGGTTTTTCTTCGGAAAGACGTA TGTCCATGCTCAGATTTCTAACGTTGCACCTTTTTGCTAGCCTGATATGGTCCTTCTTTGTAGCTGTTTTTATGTTGCAA AATTGAGTAGTTGAATTTCACACATCTATGGCAATAGTTGTATGACATGCCCTACGTAGATGTTTAAAACACATCCTTTT AGTTGTACATTTCATTAAGATGTATGGATATACTGCAAGACTGGAAACTTAACAATCCAAATGTCCAGTCACGGGGAGGG GGTTGTTGAGATCCTGCAATGATTGGGTATATGGATGAAATGCCCACAACGATTTCTTAGGAAATCGTCCCCTTTTATAG CTTTTAAGGTTGAGTTACACTCAAGTTTAGTATCAACAAATAAAAAAGGAAGAAATTATTATGACTACATGGTTTAAGAA GTTTTGGTAACATATCAAAGAAACATTCTCCTAAAAGTTTAATCTTTTAGGTAGAGGGCCATGAATAATTTTATATCCAA CAATTTACATTCTCTCACTTCATTGCCAGAAAAGAAAATATCCTCAATTGTTCAGTCTTCATCTAGCCATTCACCTTCTA CTTGCAATCTGAGGAGCTCAGAAGCCAGAATTGCATATTGGCTGAAGGAATCAAAACAAGTAATTGAAGTGAACTGTATT GTATGATTGTATGATAACTGATGATGAAACTTGTAATGCAGGGTTAGCAGGACAGCAACAAAGGGACTTCTTGTGCATTT AGGATGTGATGTCACCTCTGTAAGCTCAAGCGAGGAATGCCTGCGTGCTGTTCCTGCAGAACACAAAGTGATCTTCATGG ATGTTAGTACAGGGTTAGATGGTTATGAACTAGTGGTACGAGTAAAAGAGAGGTTTCCGAAACGCCAAGATAGACCACTA ATAGTTGCTCTTACGGGAAACACCAGCAAGGTGACAAAAGAGAACTGTATGAGAGTTGGTATGGATGGCCTTATATTGAA ACCTGTTTCTGTTGACAAAATGAGGGGTGTTTTATCAGAACTCTTGGAGCGGGGAGTTCTATTTGAAACTGTTTAA
CDS sequence (LotjaGi3g1v0054100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAATCCTGCAATTGTATTGATCCGCAATGGCCAGCTGATGAATTGTTGATGAGATACCAGTATATCTCAGATTTCTT CATTGCCCTTGCTTATTTCTCGATCCCTCTCGAGCTTATCTACTTTGTTAAGAAATCAGCAGTGTTTCCATATAGATGGG TCCTTGTTCAGTTTGGTGCTTTCATAGTTTTATGTGGAGCAACACATCTAATTAATTTGTGGACCTTCACAATCCATTCA AGAACTGTGGCAGTTGTAATGACCATTGCTAAAATTTTAACCGCTGTGGTGTCATGTGCCACCGCCCTTATGCTTGTACA TATTATTCCTGATTTATTAAGTGCTAAGACTAGAGAAATGTTTTTGAAGAACAAGGCTGCTGAGCTTGATAGAGAAGTTG GCCTGATTCGGACGCAGGAAGAAACTGGTCGACATGTTAGGATGTTGACTCATGAGATTAGAAGCACACTTGACAGACAC ACAATACTGAAAACGACTCTTGTTGAACTGGGTAGAACTTTAGGACTGGAGGAGTGTGCCTTATGGATGCCGACACGTAC GGGGTTGGAGCTTCAACTGTCATACACGTTGCGGCAGCAGAATCCAGTTGGATATACAGTACCCATTCATCATCCTGTGA TCAACCAAGTATTTAGCAGCAACCGTGCGGTAATAATTTCACCTAATTGTCCTGTTGCCAGATTGCGACCTCACACTGGA AAATACATAGCTGGGTCAGTAGTAGCTGTTCGGGTTCCTCTCCTACATCTTTCTAATTTCCAAATATATGATTGGCCTGA GGTTTCAACTAGAAACTATGCACTGATGGTATTGATGATTCCATCAGATAGTGCCAGGCAATGGCACGTGCATGAGTTAG AGCTGGTTGAGGTAGTTGCTGATCAGGTAGCCGTTGCTCTTTCGCATGCTGCAATCTTAGAAGAATCAATGAGGGCAAGG GATCTGCTAATGGAGCAGAATATTGCACTTGATCTGGCAAGAAGAGAAGCAGAAACTGCAATTCGGGCTCGCAATGATTT TTTGGCTGTTATGAATCACGAGATGAGAACTCCCATGCATGCAATTATTGCACTATCTTCATTGTTACAGGAAACAGAGC TGACTTCTGAGCAGCGACTGATGGTGGAGACAATATTGAAAAGCAGCAATTTATTGGCTACTTTGATAAATGATGTTTTG GATCTTTCACGGCTTGAAGATGGCAGTTTTCAACTTGAAGCAGCAACATTTAATCTCCATTCATTGTTTAGAGAGGTCCT TAACCTGATTAAGCCTGTTGCATCTGTTAAAAAGTTGTCACTCACTTTACATTTAGCATCAGATTTGCCAGTGTATACCA TTGGTGATGAAAAGCGTCTGATGCAAACTATGCTGAATGTTGTTGGTAATGCCGTGAAATTCTCAAAAGAGGGCAGCATT TCCATCACTGCTTTTGTTGCAAAGCCAGAATCCTTCAGGGATATCCGAACTCCTGACTTCCTACCAGTGCCAAGTGATGG CTACTTTTATTTGCGAGTACAGGTAAAAGATTCAGGATCAGGAATTAATCCACAAGATATCCCAACGTTATTCACTAAGT TTGCACAAAACCAATCACCAGCAGCAAAAAGTTCTGCTGGAAATGGACTTGGCCTTGCAATTAGTAAGAGGGTTAGCAGG ACAGCAACAAAGGGACTTCTTGTGCATTTAGGATGTGATGTCACCTCTGTAAGCTCAAGCGAGGAATGCCTGCGTGCTGT TCCTGCAGAACACAAAGTGATCTTCATGGATGTTAGTACAGGGTTAGATGGTTATGAACTAGTGGTACGAGTAAAAGAGA GGTTTCCGAAACGCCAAGATAGACCACTAATAGTTGCTCTTACGGGAAACACCAGCAAGGTGACAAAAGAGAACTGTATG AGAGTTGGTATGGATGGCCTTATATTGAAACCTGTTTCTGTTGACAAAATGAGGGGTGTTTTATCAGAACTCTTGGAGCG GGGAGTTCTATTTGAAACTGTTTAA
Protein sequence (LotjaGi3g1v0054100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESCNCIDPQWPADELLMRYQYISDFFIALAYFSIPLELIYFVKKSAVFPYRWVLVQFGAFIVLCGATHLINLWTFTIHS RTVAVVMTIAKILTAVVSCATALMLVHIIPDLLSAKTREMFLKNKAAELDREVGLIRTQEETGRHVRMLTHEIRSTLDRH TILKTTLVELGRTLGLEECALWMPTRTGLELQLSYTLRQQNPVGYTVPIHHPVINQVFSSNRAVIISPNCPVARLRPHTG KYIAGSVVAVRVPLLHLSNFQIYDWPEVSTRNYALMVLMIPSDSARQWHVHELELVEVVADQVAVALSHAAILEESMRAR DLLMEQNIALDLARREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQETELTSEQRLMVETILKSSNLLATLINDVL DLSRLEDGSFQLEAATFNLHSLFREVLNLIKPVASVKKLSLTLHLASDLPVYTIGDEKRLMQTMLNVVGNAVKFSKEGSI SITAFVAKPESFRDIRTPDFLPVPSDGYFYLRVQVKDSGSGINPQDIPTLFTKFAQNQSPAAKSSAGNGLGLAISKRVSR TATKGLLVHLGCDVTSVSSSEECLRAVPAEHKVIFMDVSTGLDGYELVVRVKERFPKRQDRPLIVALTGNTSKVTKENCM RVGMDGLILKPVSVDKMRGVLSELLERGVLFETV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 3 | 558 | 556 | 0.0 | – | |
| PANTHER | 3 | 558 | 556 | 0.0 | – | |
| Phobius | 20 | 41 | 22 | - | – | |
| TMHMM | 26 | 43 | 18 | - | – | |
| Phobius | 42 | 52 | 11 | - | – | |
| Phobius | 53 | 71 | 19 | - | – | |
| TMHMM | 53 | 75 | 23 | - | – | |
| Phobius | 72 | 82 | 11 | - | – | |
| TMHMM | 82 | 104 | 23 | - | – | |
| Phobius | 83 | 109 | 27 | - | – | |
| Phobius | 110 | 674 | 565 | - | – | |
| Gene3D | 139 | 310 | 172 | 1.5E-13 | ||
| Pfam | 158 | 307 | 150 | 1.8E-15 | ||
| SMART | 158 | 317 | 160 | 1.4E-17 | ||
| SUPERFAMILY | 158 | 319 | 162 | 3.27E-14 | – | |
| Gene3D | 311 | 407 | 97 | 6.9E-25 | – | |
| SUPERFAMILY | 329 | 409 | 81 | 4.51E-18 | ||
| CDD | 341 | 404 | 64 | 2.9357E-15 | ||
| SMART | 343 | 408 | 66 | 1.0E-20 | ||
| Pfam | 344 | 408 | 65 | 4.0E-16 | ||
| ProSiteProfiles | 350 | 567 | 218 | 40.149 | ||
| SUPERFAMILY | 397 | 561 | 165 | 3.41E-27 | ||
| Gene3D | 408 | 571 | 164 | 9.3E-33 | ||
| Pfam | 455 | 561 | 107 | 1.3E-19 | ||
| SMART | 455 | 590 | 136 | 7.8E-16 | ||
| CDD | 460 | 581 | 122 | 9.31881E-22 | – | |
| ProSiteProfiles | 549 | 665 | 117 | 21.827 | ||
| SMART | 554 | 661 | 108 | 1.1E-7 | ||
| CDD | 557 | 665 | 109 | 5.08338E-13 | ||
| Pfam | 558 | 658 | 101 | 6.0E-9 | ||
| PANTHER | 558 | 671 | 114 | 0.0 | – | |
| PANTHER | 558 | 671 | 114 | 0.0 | – | |
| SUPERFAMILY | 558 | 666 | 109 | 1.61E-17 | ||
| Gene3D | 574 | 667 | 94 | 4.4E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Phosphorelay sensor kinase activity | Catalysis of the phosphorylation of a histidine residue in response to detection of an extracellular signal such as a chemical ligand or change in environment, to initiate a change in cell state or activity. The two-component sensor is a histidine kinase that autophosphorylates a histidine residue in its active site. The phosphate is then transferred to an aspartate residue in a downstream response regulator, to trigger a response. | ||
| Biological process | Phosphorelay signal transduction system | A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins. | ||
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
Expression pattern of LotjaGi3g1v0054100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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