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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0422400 |
Transcript ID | LotjaGi3g1v0422400.1 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7LI80|G7LI80_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi3g1v0422400 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:83113300..83121198) extracted from Lotus japonicus Gifu genome v1.2.
CGTTAAAGAAAATCAAACTCATCAATGTCCAATTTTATCAGTGTCGTCAGAGTCAGTCAGCGAAATTAAGCAACAAAAAC TATTTACCTCGTATAATTTGGGTAGGTAGAGAAGAAGTCAATGAAGACGGCGTGGAAAACTTTAAAAAATTTAAGCAACA AAATTGAGACTGAATTGGCCCTTATTATATATAGGCATATATAAGAAGACCTGTTTGTTTCACTCTTTCTTTACAGTAAC AGTGGCAATGTCGTCTTCTTCTTCTTCTTCCGGCCAGTGTGTCTTCCCCAAAAAAGAGAAGAAATAAGTGTTAAATGTGA TATCTGATATGATGTGATAATAAAAGAGAAAAAAAGGTGTTTCAAATATGCACTATGAAGTGGTACATGATAACATGAAT CAGAGTTGTTTCTTATCATTGAGGGTGTGGGTGAATGTGTTGTGAGGCCTGGAATAAAAGGAAAAAGGTGAGGTATGTGT GTGCATGTGAGTGGTAAGGGAAAAAGAAAAAAGAAAAAGATGGTTTGACAATCATTCTATGGAGACCCACATTTCAAATT TTCAATTATAGAGATATAATAGAAGATAGAAGATTGAGAAATATCATATAAATCCATCCTATGTTAGTTACTTAAAGAAC ACACTCCTTCTTTCTTTCTTTCTTTCTCATTTTCTCTATACTAACAGTGGCTATGTCTTCTTTTTCTTCCAGTGTGGCTT CCCCAAAAAAGTTCGATGTTTTCATTAGTTTCAGGGGTGAGGACACCCGAGATAACTTCACAAGCCATCTCCATGCTGCT CTCAGAGACAAGAATATCGTAACCTACATAGATGATCAGCTTAAAAGAGGAGATGATGTTGGACTAGAGCTTGAAAAGGT AATCAAGAACTCGCTGATGTCTGTTGTGGTGTTCTCAGAAAGATACGCAACTTCAAAGTGGTGTTTGCAAGAATTGGTCA TGATAACGAAATGCAGAAGAGACGAGGGACAGGTTGTTCTTCCAGTGTTCTACAAAACAAATCCAACCGACGTGCGGAAT CAGACAGGGAGTTATCAGAAACCATTTGAAGAATATGATCAAGCTGCAGCCGCTGGTGAAATTATAACCGATCAAGACAA AGTGGGTAGGTGGAGAGCTGCTCTCTCTGAAGCAGCCAATATATCTGGATGGGACTCAAGTACCCACAAGTAAGTAACCA AATTCACTCTTTTTTCTCTCTCCTTATACACTTTGATCTGGTTTTAGTGGTTTGACCAAGATTCAAGTAGCTAGATAAGA TAATTTTTTTTTTGAAAGAACTAAGATAAGATATAATTTTTATAATGTTCTTCAGAAGAAAAAATAATCAATCTAGAGTA ACACAAATCCAGCCTAGGCCGACGGATCATCTCATCCCCGGATGCGCAAACTATAACTCATCCTCAATAAATGAGGGCGA CTATAACTCCCACTTGAGTTAAAGGCGTTGTCCCAATTCATAAATCAATCATGACACCCAATTAATACCATTATTGCGCT TTGAAACCCTTAGAAAACCCAGCAACCCAAGAGACAAAGTAAGCCTTTATAAGGGGACTTTGGCCCAACACCTGGGGCAT ATTCACTCTAATGCTAATTCAGGAATTGAGCTTGGAGATTTACCCTCTCAGCTTGGGACCCCCAAAGTTTAGAGAGAACA TCTCACAAGTATCAGGCGACATTCAAAACTACATTACACTCAAAATCATCTAGAGGGAAATGAATCCTAAATTTTTTAAA CATGGTATCACACACATAGATAAGAGAAAAAGAATCAGGTTCAGAGGCATCCGTGTAAATTCACTTGTCGTCCTCGCATG GCGTGGCAAGAACAACCCCTCATCTTCCTTACTTATCGTTCACGAAACACAGTAAGGATCTCCACATATTCCATCGACCC TTCTTCTATTGAGCAAGAAACTTTCTTTTGCGTCGGATTCCGACATGATGCAAGATCGCTACAAAGCAAAAGTGGTAGGG TTAAGGGTAGTTTCGAATGGCGAAGACAAAGAGCCGAAGGTAGGGTCACTGGAACACAAGCTAGAAAACCCCGCAGAGAC AAAATCCCCACCCACATATTAATTTTTTAATTATTAATTATATATCTGTCATTTAAATTTTAATTAAAAATAACGTGGTT AATGTTACGCTAGCTCTGACCTACCACTAGGCAAGGTCAACGGAGCTCTAACGCAGGGATAAAAAGAAAAAGATTTCAAT TAGAGACGAAAATTGAACTAACAATTTAATAGTTAACCATTAAGTTTTTAGCTTCTGACAATTTGAATCATTTCTTTAGT CTTATTAATTCCTTTATTTGACAGGGACGATTCTCAAGTCATACAGAACATTGTCAACGATGCTTTGCAAAAGCTGCTCC TGAGGTACCCTAATAAACTAGAAGGCCTTGTTGGAATTGAGAAACACTGTACAGATATTGGGTATATCCTGGGAAAAGTT GGAAGAATTGGAATTTGGGGGATGGGAGGTATAGGTAAGACAACCATTGCTAAAGCCATGTTTGCCAAACACTTCCCTCA ATATGACAGTGTGTGCTTCTTGGAAAACGTAAGAGAAGAGTCACAGAAGCACGGGCTAGCATATATCCGAGATAAGCTTC TCTTTGAGCTACTGAAGGAACAAGTTACAGCATCCAATATTTCTGGATCCACATTCGTGAAGAGAAGGCTCAGTAGCAGG AAAGTTTTCATTGTGATTGATGATGTGGACAGTTTTGAGCAATTAGAATATTTGTGTGAAGAATTCAGTGACTTGGGACA AGGTAGCGGTCTCATTGTAACAACAAGAGATAAACATTTGCTTCATGGAAGAGTTGAAAAGATATATGAGGTTGAGAAGT GGAACTTACAAAAATCGCTTGTGCTCTTCAGCTTAGCAGCCTTCAAGAAAAGCAAGCCTGAAAAGGGTTACGAGGATCTC TCCCGAAGGGCAGTTGAATATGCAGGAGGCGTTCCATTAGCTTTAAAAGTTTTGGGTTCACATTTTCGTTCCAGAGAAAC TCAGTTCTGGGAATCTGAGTTGAATTACTTGGAGAGCAAGAAGGAGCCCCTTAAGAAAATTCAAGAAGTGTTAAAGGTGA GCTATAATGGATTAGAAAGGAGGGATCTGCAGTCAATATTTCTGGACATTGCTTTCTTTTTCAAAGATGAAAATAAAGAT TCCGTCATAAAGATACTAGATGCTTGTGGTTTTAATGCTATTAGTGGAATAGAAATGCTTAAAGATAAAGCTCTTATAAG TATTTCAAACAGCAATATTATAGAAATGCATGACTTGCTACAAGAAATGGGTTTCGATATAGTTCGTAAAGACGTGACAG ACCCTGGAAGACGTAGCCGATTGAGGGATATTGAGGAAGTTAATAATGCACTTCAAAATGACGAGGTAAGAAAAGATACG CTAGACGTGTTTTCAATTAGAAATCATGGCGAATTTGCTACCTGATTTACTTATTTGCTGTCTTGACAGGTCCTTCCTGA AGTTGAAGGAATAAAGTTAGATTTGTCTCAGGCAGTAAACTTGCAGTTGAGTGATGACTTATTCAACAGGATGCCTAATT TAAGATTTCTTAGTTTATATGTCCCTGTGGGTAAGCAGAGATCAGCTGAAGTGCACTTCTATCCCGGACTCCTCCATAGG CAAGGTTCTGCTGGATTGAAGTATCTTGAGTGGAGTGGATACCCTTCAAAGTCTCTTCCACCAAATTTTTGTGCTAAGTT TCTTGTTGAGATTCGCATGCCACACAGCCATGTTAAAGAACTTTGGCAGGGGACGCAGGTAAAGATTCACATTTTCCTGT ATGCTTACATTTTCAGCTCAACTGAAAATATGAGATGACATTCCTTTTGAATTTGTGCAGGATCTTGTGAATTTAGAGAC AATTGACCTGAGTGAATGCAAACAGTTGGTGAAGCTCCCTGATTTGTCTAAAGCATCAAAACTCAAATGGGTTCATCTCT CCGGTTGTGAAAGTTTGTGTTTAGTTCATCTTTCATCTGTGGACACACTAGTTACTTTGATACTGGATAGGTGCAAAAAA CTGAAGAGTCTTAAAATTGAAAAGCATTTAAGCGATCTGCAGAACCTCAAAGTGGAGAACTGTTTCAGCCTCAAGGAATT TTCAGTGTCGTCCGATTCAATTCAATCGTTGGATTTAAGCAAAACAGGTGTCAAAAAATTGTACTCGTCAATCGGTCGGC TAAGCAAGCTTGTGTCCCTCAATCTAAATGGTTTGAGACTGCAGAATATTCCTAACGAGTTATCAGGCCTGACTTCTCTT GGGGCGCTATTCATTTCTAACTGCGGAGCAGTTGACAAAGAGAAGGTGCATGTCCTATGTGCTAGCTTACGATCCTTACG ATTTCTATATCTGATTAATTGTTATAAGTTGTTTGAACTCCCGGACAACATAAGTGCCTTGTCATCACTTTGTGAATTGA GGCTCGATGGAAGCAGTGTGAAGAAGTTACCTACAAGTATCAAGCTTCTTGAAAATCTGGAGGTTCTCTCCTTAAACTAT TGTAGGAAGCTTCAGTTTCTACCTCAGCTTCCACTGTTCATCCAAGAGCTTCGTATCATCAACTGTACCTCATTAGTGGC GGTATCTACTTTAAAGACCTTTGCAATCCAGATGAAGGGAAAGCAGAAAGACATTTCGTTTATGAATGGAATGAAACTGA ATGAACATTCGCTCCTCCGGATTATGGCAGACGCCGTGTTTACAATGAAGAGTGCTGCATTCCACCGTGTATATGTAAAA AGGTTTGGTTTCGATACTTACAATGACCATTATAACAGAGTTAGAGTTTGTCTACCTGCTGGAAACAGTGTCCCAGAGCT AGGGCCGTTGGCATATCGAACCACAGGGTCCTCAATTACCATTAGAAATCCTAGACCTTCGTCCAACTGGTTTGGCACCA TTTATTCTGTGGTTCTTTCTCCATCCGCTGGAATCAAGGGGCATTGTGCTAAAATCAAATGCCGAATCTATGGGAGAGTT GGTGTTTCGGGACAGAGGAGATGGAAGACTTCATCATTGTATGACAAAGACATAGGGGAGTTCAATTCAGATCATGTTTT TGTATGGGAAGGTTCAAGTCCGCATGTTTTTACTCACAATGATGAAAACATTGATTTTGTGTTCTCCGTTACAACTGAAA CTGGGGAAGATGATGAACTAATCAAAATAAAAGAGTGTGGGGTTCAACTAACATGTTTCTCAGATTCTGAGCTTCACAGA TTCTTACAGGAAACACTAGACTTGAAACCGCAGTTATCAGGTATGACCCTACTATATTAAATTTTGAATTTTCAAGTTTT CATAAATTGATATAATTTAATCATATTTATTTGAAATGGTTATTTATATGTTTTACGACTTCGGTACACTCATGATTAAA AATGATTTAAATTAATTTTATTGATGATGTGAATTGTTTACATCGAGTTTGAGAGTGAACAAATCGTGTCTATAGCGTTT CTTCTTTTTTCATTCATGGTGGTTGTTAAACACTCACTAAATAGTAAATACAGGCATGCAACTAAGGTAAAAGATGAACT AATCGTGTCCATGTGTTGCTGAACTGAGGCAACACTATACTATCGAAACTGCGAGAGGAGGACATAGATTTGTGTCTGAC AGTGGTTCTGAGCTTCTTCCAAATATCACAATTGAGGTTTGTTTCCATTGACTATTTCATATGCTATGTCATTTATTGAT GTTTCATTTTTCATTTCTCCTCTTTTTGGTATTAAGTATGTGAGTTTAAGCTGTGATTTGGGCGGTTGCAAGATGCAATA TTCATAAGTTGACTCTGAAAATCTTTATTGCAGAGTTACCCATTTTTTGTTCTGATGGGGTCTGCCCTGAGGGAAACCTG AATTAGGGGCAATATGACCTCTTATGTGGGGTTTATACGTCTGTTTTTGCTATGTTAGGTACAGTTCTAGAACACGCCTT AAGAACATATAATATTCTTTTAGCTGATTATTGTCACTTTATGTATGCCTTACTTTTGATTAAGTGCATAGAATTGATAA AAAACATCATACCAAGAATTGTTGCTGCACACTGAATTATTCACAGGGTATTTATGGTTAACTATATATATTAATAATGT TTTAAGAATTCTGATTAGTATTCTTAGTTTTTAGATTGAAATTTCAGCATCACTTGCCATTGGCATTGTTTCTGCGTGAG TTAAGCATTTTGTAAGTGTATTTGATCTGATTTTTACCATTGTTGAGATCTTTTTTTTTGCAGTTTGCATTTTTTTTATA AGCTTGCAGTTTGCATGTTTCCTCTTCTGAATCTTCACAGGTTATGGATCAAGCTATGGAGAATGGCCTTATTTTCATTG ATGGTTCTGGACCGACATACATTACTGCCACCGTAAGTGCCATGTTCATAACAATATCCTTCTTTCCCAAGCTCATATTG TTTGCCGAAAGCCATTATATTTTAGAAACTTTCTATTTAAGTTCATCATGGTAGAGATGAATTTATCCCATGAATACATC CTCATCGATACCAATTTGATTAAGTAATCTAGAATGGGATTAAGGATGGACAATTTAGCTTTGATTATCTTCTTTACTAT GAAATTAGTTTATTAGTTATTACTACTATGGAATTAATGCATTTGTATTCAGCTGAATCTTTTCTTTACTGTTTGGAATC AATAAGGTTGCGACGATGATGATGGCCACAAAAATATGGTCTGCAAGCTTATAAAGGTAGGACATATATGTTTTCAATTT CTTACCACTTGGAAAGTTATAGCGCAGTTTAGTATTAGCTTTATGGTTGAATGTTGCAGGTAGAGCCAAAGAATCCGAAT AAGGGAATGGTGGCAGATCTATGAAATAGCTATGCGATGGTTAGTCTCTAACTTCTTATTGTCTGAGTGAAGAACGTATT GCTTTTGTGTTCTCCTACCTTGAAAACAAAATTACTTTTCTTTTAATCATATATATTTCCCCATTTCAATAGTTGATAAG TCATGGATGATGGATGATATTACTTATTTGGGTACTTGCCAATCACTGTTAGAAATAATTGCTTTTGTCAGTTATGTTTC TTGCTTAAAGTGTTTTTAGAAGTCTGTTACAAAGTAAAGTGTCTTTACGGACTGTTACAAAGTAAAATTTCTTTAAGAGT CCGTTAGAAAGTCTAATGTTATTACTTATTACACTTTATTAGGAATTATTGAGTAAGCTTACATCTTGATATAATTGAAG TTTGCTTAATGTGTTTTCTACTGCACATCCTGATTTTTGTAACGTGTTTTCTACAGGAGGGAAAAGAAGAGAAGAATGTC AGACTTTGCACTGACTTTTGCATAAGATAACCATAGATAAAAGAAGGTCGGATAAGAAGAGCATGCTTTGAGTAAGAAGA GTGAGAGAATGAAGGAAGATTAAAATCTTCAAAGGAGTATAAAAAGACTCTGAGCACTTGATTTCTTTTATGTTGAGCAT TGATTTAATTTGTAACTGACTTGATTTCTTTTATCTTACTTTTCAAGTTACTTGAGTACTCTTAATCTTCTCTATTGACA TTGGTGTGTTATTTTTTCGGCTCCCCATAATGGCACTTTGTAGGGTTTTATTTACTTTTAATGTTTTTCGTCATTCGTGA GTACTAAGTACTTTATGTGATAAGAATAACGATGGTGCTTACATATGGTTCGATGCTCATTTGCGACAATGATATCAACA ACTCTAATAGTATTGTAAATGTAACTTACAAAAAAAAAAATCACAATGTCATATGAGTAAGTTTATTGCATCTTTATATA CAAAATTCCAATAACATTTCAATCCATTAAATCAAATTATACTCATGTAAGCATCTTTT
CDS sequence (LotjaGi3g1v0422400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTTCTTTTTCTTCCAGTGTGGCTTCCCCAAAAAAGTTCGATGTTTTCATTAGTTTCAGGGGTGAGGACACCCGAGA TAACTTCACAAGCCATCTCCATGCTGCTCTCAGAGACAAGAATATCGTAACCTACATAGATGATCAGCTTAAAAGAGGAG ATGATGTTGGACTAGAGCTTGAAAAGGTAATCAAGAACTCGCTGATGTCTGTTGTGGTGTTCTCAGAAAGATACGCAACT TCAAAGTGGTGTTTGCAAGAATTGGTCATGATAACGAAATGCAGAAGAGACGAGGGACAGGTTGTTCTTCCAGTGTTCTA CAAAACAAATCCAACCGACGTGCGGAATCAGACAGGGAGTTATCAGAAACCATTTGAAGAATATGATCAAGCTGCAGCCG CTGGTGAAATTATAACCGATCAAGACAAAGTGGGTAGGTGGAGAGCTGCTCTCTCTGAAGCAGCCAATATATCTGGATGG GACTCAAGTACCCACAAGGACGATTCTCAAGTCATACAGAACATTGTCAACGATGCTTTGCAAAAGCTGCTCCTGAGGTA CCCTAATAAACTAGAAGGCCTTGTTGGAATTGAGAAACACTGTACAGATATTGGGTATATCCTGGGAAAAGTTGGAAGAA TTGGAATTTGGGGGATGGGAGGTATAGGTAAGACAACCATTGCTAAAGCCATGTTTGCCAAACACTTCCCTCAATATGAC AGTGTGTGCTTCTTGGAAAACGTAAGAGAAGAGTCACAGAAGCACGGGCTAGCATATATCCGAGATAAGCTTCTCTTTGA GCTACTGAAGGAACAAGTTACAGCATCCAATATTTCTGGATCCACATTCGTGAAGAGAAGGCTCAGTAGCAGGAAAGTTT TCATTGTGATTGATGATGTGGACAGTTTTGAGCAATTAGAATATTTGTGTGAAGAATTCAGTGACTTGGGACAAGGTAGC GGTCTCATTGTAACAACAAGAGATAAACATTTGCTTCATGGAAGAGTTGAAAAGATATATGAGGTTGAGAAGTGGAACTT ACAAAAATCGCTTGTGCTCTTCAGCTTAGCAGCCTTCAAGAAAAGCAAGCCTGAAAAGGGTTACGAGGATCTCTCCCGAA GGGCAGTTGAATATGCAGGAGGCGTTCCATTAGCTTTAAAAGTTTTGGGTTCACATTTTCGTTCCAGAGAAACTCAGTTC TGGGAATCTGAGTTGAATTACTTGGAGAGCAAGAAGGAGCCCCTTAAGAAAATTCAAGAAGTGTTAAAGGTGAGCTATAA TGGATTAGAAAGGAGGGATCTGCAGTCAATATTTCTGGACATTGCTTTCTTTTTCAAAGATGAAAATAAAGATTCCGTCA TAAAGATACTAGATGCTTGTGGTTTTAATGCTATTAGTGGAATAGAAATGCTTAAAGATAAAGCTCTTATAAGTATTTCA AACAGCAATATTATAGAAATGCATGACTTGCTACAAGAAATGGGTTTCGATATAGTTCGTAAAGACGTGACAGACCCTGG AAGACGTAGCCGATTGAGGGATATTGAGGAAGTTAATAATGCACTTCAAAATGACGAGGTCCTTCCTGAAGTTGAAGGAA TAAAGTTAGATTTGTCTCAGGCAGTAAACTTGCAGTTGAGTGATGACTTATTCAACAGGATGCCTAATTTAAGATTTCTT AGTTTATATGTCCCTGTGGGTAAGCAGAGATCAGCTGAAGTGCACTTCTATCCCGGACTCCTCCATAGGCAAGGTTCTGC TGGATTGAAGTATCTTGAGTGGAGTGGATACCCTTCAAAGTCTCTTCCACCAAATTTTTGTGCTAAGTTTCTTGTTGAGA TTCGCATGCCACACAGCCATGTTAAAGAACTTTGGCAGGGGACGCAGGATCTTGTGAATTTAGAGACAATTGACCTGAGT GAATGCAAACAGTTGGTGAAGCTCCCTGATTTGTCTAAAGCATCAAAACTCAAATGGGTTCATCTCTCCGGTTGTGAAAG TTTGTGTTTAGTTCATCTTTCATCTGTGGACACACTAGTTACTTTGATACTGGATAGGTGCAAAAAACTGAAGAGTCTTA AAATTGAAAAGCATTTAAGCGATCTGCAGAACCTCAAAGTGGAGAACTGTTTCAGCCTCAAGGAATTTTCAGTGTCGTCC GATTCAATTCAATCGTTGGATTTAAGCAAAACAGGTGTCAAAAAATTGTACTCGTCAATCGGTCGGCTAAGCAAGCTTGT GTCCCTCAATCTAAATGGTTTGAGACTGCAGAATATTCCTAACGAGTTATCAGGCCTGACTTCTCTTGGGGCGCTATTCA TTTCTAACTGCGGAGCAGTTGACAAAGAGAAGGTGCATGTCCTATGTGCTAGCTTACGATCCTTACGATTTCTATATCTG ATTAATTGTTATAAGTTGTTTGAACTCCCGGACAACATAAGTGCCTTGTCATCACTTTGTGAATTGAGGCTCGATGGAAG CAGTGTGAAGAAGTTACCTACAAGTATCAAGCTTCTTGAAAATCTGGAGGTTCTCTCCTTAAACTATTGTAGGAAGCTTC AGTTTCTACCTCAGCTTCCACTGTTCATCCAAGAGCTTCGTATCATCAACTGTACCTCATTAGTGGCGGTATCTACTTTA AAGACCTTTGCAATCCAGATGAAGGGAAAGCAGAAAGACATTTCGTTTATGAATGGAATGAAACTGAATGAACATTCGCT CCTCCGGATTATGGCAGACGCCGTGTTTACAATGAAGAGTGCTGCATTCCACCGTGTATATGTAAAAAGGTTTGGTTTCG ATACTTACAATGACCATTATAACAGAGTTAGAGTTTGTCTACCTGCTGGAAACAGTGTCCCAGAGCTAGGGCCGTTGGCA TATCGAACCACAGGGTCCTCAATTACCATTAGAAATCCTAGACCTTCGTCCAACTGGTTTGGCACCATTTATTCTGTGGT TCTTTCTCCATCCGCTGGAATCAAGGGGCATTGTGCTAAAATCAAATGCCGAATCTATGGGAGAGTTGGTGTTTCGGGAC AGAGGAGATGGAAGACTTCATCATTGTATGACAAAGACATAGGGGAGTTCAATTCAGATCATGTTTTTGTATGGGAAGGT TCAAGTCCGCATGTTTTTACTCACAATGATGAAAACATTGATTTTGTGTTCTCCGTTACAACTGAAACTGGGGAAGATGA TGAACTAATCAAAATAAAAGAGTGTGGGGTTCAACTAACATGTTTCTCAGATTCTGAGCTTCACAGATTCTTACAGGAAA CACTAGACTTGAAACCGCAGTTATCAGGCATGCAACTAAGGTAA
Protein sequence (LotjaGi3g1v0422400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSFSSSVASPKKFDVFISFRGEDTRDNFTSHLHAALRDKNIVTYIDDQLKRGDDVGLELEKVIKNSLMSVVVFSERYAT SKWCLQELVMITKCRRDEGQVVLPVFYKTNPTDVRNQTGSYQKPFEEYDQAAAAGEIITDQDKVGRWRAALSEAANISGW DSSTHKDDSQVIQNIVNDALQKLLLRYPNKLEGLVGIEKHCTDIGYILGKVGRIGIWGMGGIGKTTIAKAMFAKHFPQYD SVCFLENVREESQKHGLAYIRDKLLFELLKEQVTASNISGSTFVKRRLSSRKVFIVIDDVDSFEQLEYLCEEFSDLGQGS GLIVTTRDKHLLHGRVEKIYEVEKWNLQKSLVLFSLAAFKKSKPEKGYEDLSRRAVEYAGGVPLALKVLGSHFRSRETQF WESELNYLESKKEPLKKIQEVLKVSYNGLERRDLQSIFLDIAFFFKDENKDSVIKILDACGFNAISGIEMLKDKALISIS NSNIIEMHDLLQEMGFDIVRKDVTDPGRRSRLRDIEEVNNALQNDEVLPEVEGIKLDLSQAVNLQLSDDLFNRMPNLRFL SLYVPVGKQRSAEVHFYPGLLHRQGSAGLKYLEWSGYPSKSLPPNFCAKFLVEIRMPHSHVKELWQGTQDLVNLETIDLS ECKQLVKLPDLSKASKLKWVHLSGCESLCLVHLSSVDTLVTLILDRCKKLKSLKIEKHLSDLQNLKVENCFSLKEFSVSS DSIQSLDLSKTGVKKLYSSIGRLSKLVSLNLNGLRLQNIPNELSGLTSLGALFISNCGAVDKEKVHVLCASLRSLRFLYL INCYKLFELPDNISALSSLCELRLDGSSVKKLPTSIKLLENLEVLSLNYCRKLQFLPQLPLFIQELRIINCTSLVAVSTL KTFAIQMKGKQKDISFMNGMKLNEHSLLRIMADAVFTMKSAAFHRVYVKRFGFDTYNDHYNRVRVCLPAGNSVPELGPLA YRTTGSSITIRNPRPSSNWFGTIYSVVLSPSAGIKGHCAKIKCRIYGRVGVSGQRRWKTSSLYDKDIGEFNSDHVFVWEG SSPHVFTHNDENIDFVFSVTTETGEDDELIKIKECGVQLTCFSDSELHRFLQETLDLKPQLSGMQLR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 3 | 771 | 769 | 7.6E-229 | – | |
SUPERFAMILY | 3 | 160 | 158 | 7.06E-38 | ||
PANTHER | 3 | 771 | 769 | 7.6E-229 | – | |
Gene3D | 8 | 184 | 177 | 3.2E-63 | ||
ProSiteProfiles | 12 | 157 | 146 | 25.119 | ||
Pfam | 13 | 190 | 178 | 9.3E-40 | ||
SMART | 13 | 157 | 145 | 7.6E-38 | ||
SUPERFAMILY | 184 | 441 | 258 | 4.42E-50 | ||
Gene3D | 185 | 340 | 156 | 9.2E-24 | – | |
PRINTS | 213 | 228 | 16 | 2.0E-23 | – | |
Pfam | 214 | 427 | 214 | 1.2E-24 | ||
PRINTS | 287 | 301 | 15 | 2.0E-23 | – | |
PRINTS | 379 | 393 | 15 | 2.0E-23 | – | |
SUPERFAMILY | 416 | 503 | 88 | 2.39E-9 | ||
Gene3D | 519 | 695 | 177 | 3.9E-16 | ||
SUPERFAMILY | 536 | 874 | 339 | 1.16E-36 | – | |
Pfam | 610 | 629 | 20 | 4.0E-5 | ||
PRINTS | 629 | 645 | 17 | 2.0E-23 | – | |
Gene3D | 696 | 888 | 193 | 3.6E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi3g1v0422400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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