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| Field | Value |
|---|---|
| Gene ID | Lj3g3v1261130 |
| Transcript ID | Lj3g3v1261130.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable receptor protein kinase TMK1-like [Glycine max] gi|356542042|ref|XP_003539480.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 21 | 21 | – | – | |
| Phobius | 1 | 21 | 21 | – | – | |
| Phobius | 1 | 5 | 5 | – | – | |
| PANTHER | 6 | 125 | 120 | 0 | – | |
| Phobius | 6 | 16 | 11 | – | – | |
| PANTHER | 6 | 125 | 120 | 0 | – | |
| TMHMM | 7 | 24 | 18 | – | – | |
| Phobius | 17 | 21 | 5 | – | – | |
| Phobius | 22 | 493 | 472 | – | – | |
| SUPERFAMILY | 23 | 306 | 284 | 2.38E-38 | ||
| Pfam | 25 | 65 | 41 | 7.60E-05 | ||
| Gene3D | 25 | 307 | 283 | 6.90E-44 | ||
| SMART | 90 | 112 | 23 | 150 | ||
| SMART | 113 | 136 | 24 | 42 | ||
| SMART | 137 | 160 | 24 | 46 | ||
| SMART | 189 | 212 | 24 | 16 | ||
| PANTHER | 228 | 318 | 91 | 0 | – | |
| PANTHER | 228 | 318 | 91 | 0 | – | |
| SMART | 262 | 285 | 24 | 0.25 | ||
| Pfam | 328 | 369 | 42 | 0.0031 | ||
| SUPERFAMILY | 328 | 439 | 112 | 3.95E-15 | ||
| Gene3D | 329 | 439 | 111 | 1.80E-16 | ||
| SMART | 396 | 419 | 24 | 360 | ||
| SMART | 420 | 442 | 23 | 190 | ||
| PANTHER | 432 | 550 | 119 | 0 | – | |
| PANTHER | 432 | 550 | 119 | 0 | – | |
| MobiDBLite | 451 | 487 | 37 | – | – | |
| Gene3D | 464 | 611 | 148 | 5.20E-10 | ||
| TMHMM | 494 | 516 | 23 | – | – | |
| Phobius | 494 | 515 | 22 | – | – | |
| Phobius | 516 | 945 | 430 | – | – | |
| SUPERFAMILY | 573 | 884 | 312 | 2.29E-74 | ||
| PANTHER | 582 | 906 | 325 | 0 | – | |
| PANTHER | 582 | 906 | 325 | 0 | – | |
| SMART | 598 | 877 | 280 | 4.10E-32 | ||
| ProSiteProfiles | 598 | 878 | 281 | 38.082 | ||
| Pfam | 601 | 872 | 272 | 4.00E-45 | ||
| ProSitePatterns | 604 | 626 | 23 | – | ||
| CDD | 604 | 874 | 271 | 4.15E-90 | – | |
| Gene3D | 612 | 664 | 53 | 5.70E-24 | – | |
| Gene3D | 665 | 872 | 208 | 1.50E-38 | – | |
| ProSitePatterns | 723 | 735 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj3g3v1261130.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v1261130.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.