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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2780560 |
| Transcript ID | Lj3g3v2780560.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 3-like [Glycine max] gi|356547026|ref|XP_003541919.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 34 | 34 | – | – | |
| Phobius | 1 | 34 | 34 | – | – | |
| Phobius | 1 | 18 | 18 | – | – | |
| TMHMM | 15 | 34 | 20 | – | – | |
| PANTHER | 19 | 269 | 251 | 0 | – | |
| Phobius | 19 | 29 | 11 | – | – | |
| PANTHER | 19 | 269 | 251 | 0 | – | |
| Phobius | 30 | 34 | 5 | – | – | |
| Phobius | 35 | 313 | 279 | – | – | |
| Pfam | 38 | 77 | 40 | 8.50E-06 | ||
| SUPERFAMILY | 38 | 243 | 206 | 7.48E-36 | ||
| Gene3D | 43 | 244 | 202 | 3.40E-46 | ||
| Pfam | 126 | 185 | 60 | 1.30E-07 | ||
| ProSiteProfiles | 126 | 149 | 24 | 6.264 | ||
| ProSiteProfiles | 174 | 197 | 24 | 6.672 | ||
| ProSiteProfiles | 198 | 220 | 23 | 7.304 | ||
| ProSiteProfiles | 221 | 242 | 22 | 5.232 | ||
| MobiDBLite | 264 | 305 | 42 | – | – | |
| PANTHER | 288 | 344 | 57 | 0 | – | |
| PANTHER | 288 | 344 | 57 | 0 | – | |
| Phobius | 314 | 336 | 23 | – | – | |
| TMHMM | 314 | 336 | 23 | – | – | |
| Gene3D | 332 | 349 | 18 | 3.40E-21 | – | |
| Phobius | 337 | 771 | 435 | – | – | |
| MobiDBLite | 345 | 437 | 93 | – | – | |
| SUPERFAMILY | 424 | 434 | 11 | 3.40E-05 | – | |
| PANTHER | 426 | 434 | 9 | 0 | – | |
| PANTHER | 426 | 434 | 9 | 0 | – | |
| Gene3D | 459 | 549 | 91 | 3.40E-21 | – | |
| PANTHER | 460 | 770 | 311 | 0 | – | |
| PANTHER | 460 | 770 | 311 | 0 | – | |
| SUPERFAMILY | 462 | 758 | 297 | 2.43E-68 | ||
| ProSiteProfiles | 484 | 758 | 275 | 34.365 | ||
| Pfam | 487 | 756 | 270 | 1.60E-42 | ||
| Gene3D | 550 | 755 | 206 | 8.20E-39 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj3g3v2780560.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2780560.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.