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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2318170 |
| Transcript ID | Lj3g3v2318170.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | LysM type receptor kinase [Lotus japonicus] gi|290490570|dbj|BAI79272.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 26 | 26 | – | – | |
| Phobius | 1 | 26 | 26 | – | – | |
| Phobius | 1 | 10 | 10 | – | – | |
| Phobius | 11 | 21 | 11 | – | – | |
| Phobius | 22 | 26 | 5 | – | – | |
| Phobius | 27 | 238 | 212 | – | – | |
| PANTHER | 51 | 67 | 17 | 1.50E-283 | – | |
| PANTHER | 51 | 67 | 17 | 1.50E-283 | – | |
| TMHMM | 135 | 157 | 23 | – | – | |
| SUPERFAMILY | 153 | 199 | 47 | 4.58E-06 | ||
| Gene3D | 154 | 197 | 44 | 9.20E-07 | ||
| SMART | 154 | 198 | 45 | 7.10E-05 | ||
| PANTHER | 186 | 271 | 86 | 1.50E-283 | – | |
| PANTHER | 186 | 271 | 86 | 1.50E-283 | – | |
| TMHMM | 237 | 259 | 23 | – | – | |
| Phobius | 239 | 263 | 25 | – | – | |
| Gene3D | 251 | 277 | 27 | 5.00E-04 | ||
| Phobius | 264 | 665 | 402 | – | – | |
| PANTHER | 310 | 648 | 339 | 1.50E-283 | – | |
| PANTHER | 310 | 648 | 339 | 1.50E-283 | – | |
| Gene3D | 329 | 362 | 34 | 5.00E-04 | ||
| SUPERFAMILY | 332 | 637 | 306 | 5.26E-77 | ||
| SMART | 355 | 642 | 288 | 4.60E-39 | ||
| ProSiteProfiles | 355 | 642 | 288 | 39.396 | ||
| Pfam | 359 | 635 | 277 | 3.70E-51 | ||
| CDD | 361 | 640 | 280 | 5.61E-84 | – | |
| ProSitePatterns | 361 | 382 | 22 | – | ||
| Gene3D | 363 | 434 | 72 | 7.90E-22 | – | |
| Gene3D | 435 | 635 | 201 | 6.60E-43 | – | |
| ProSitePatterns | 474 | 486 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj3g3v2318170.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2318170.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.