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Lj3g3v2692990.2

Overview

Field Value
Gene ID Lj3g3v2692990
Transcript ID Lj3g3v2692990.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: receptor-like serine/threonine-protein kinase ALE2-like [Glycine max] gi|356522430|ref|XP_003529849.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 18 18
PANTHER 1 58 58 0
SignalP 1 17 17
PANTHER 1 58 58 0
Phobius 1 2 2
SignalP 1 25 25
Phobius 3 14 12
Phobius 15 18 4
Phobius 19 362 344
MobiDBLite 52 170 119
PANTHER 172 188 17 0
PANTHER 172 188 17 0
PANTHER 204 211 8 0
PANTHER 204 211 8 0
PANTHER 312 338 27 0
PANTHER 312 338 27 0
MobiDBLite 320 345 26
Gene3D 350 398 49 2.50E-10
PANTHER 357 405 49 0
PANTHER 357 405 49 0
TMHMM 363 385 23
Phobius 363 386 24
Phobius 387 824 438
MobiDBLite 405 427 23
Gene3D 430 469 40 2.50E-10
PANTHER 432 739 308 0
PANTHER 432 739 308 0
SUPERFAMILY 436 729 294 1.07E-81
ProSiteProfiles 456 737 282 37.757
Pfam 459 729 271 1.00E-47
CDD 462 730 269 9.23E-97
ProSitePatterns 462 484 23
Gene3D 470 520 51 1.20E-26
Gene3D 521 729 209 1.20E-41
ProSitePatterns 578 590 13
PANTHER 774 794 21 0
PANTHER 774 794 21 0

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

Expression data

Expression pattern

Expression pattern of Lj3g3v2692990.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v2692990.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.