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Lj3g3v2692990.1

Overview

Field Value
Gene ID Lj3g3v2692990
Transcript ID Lj3g3v2692990.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: receptor-like serine/threonine-protein kinase ALE2-like [Glycine max] gi|356522430|ref|XP_003529849.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 58 58 0
SignalP 1 17 17
Phobius 1 18 18
SignalP 1 25 25
Phobius 1 2 2
PANTHER 1 58 58 0
Phobius 3 14 12
Phobius 15 18 4
Phobius 19 361 343
MobiDBLite 52 170 119
PANTHER 171 187 17 0
PANTHER 171 187 17 0
PANTHER 203 210 8 0
PANTHER 203 210 8 0
PANTHER 311 337 27 0
PANTHER 311 337 27 0
MobiDBLite 319 344 26
Gene3D 349 397 49 2.50E-10
PANTHER 356 404 49 0
PANTHER 356 404 49 0
Phobius 362 385 24
TMHMM 362 384 23
Phobius 386 823 438
MobiDBLite 404 426 23
Gene3D 429 468 40 2.50E-10
PANTHER 431 738 308 0
PANTHER 431 738 308 0
SUPERFAMILY 435 728 294 1.07E-81
ProSiteProfiles 455 736 282 37.757
Pfam 458 728 271 1.00E-47
CDD 461 729 269 9.74E-97
ProSitePatterns 461 483 23
Gene3D 469 519 51 1.20E-26
Gene3D 520 728 209 1.20E-41
ProSitePatterns 577 589 13
PANTHER 773 793 21 0
PANTHER 773 793 21 0

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

Expression data

Expression pattern

Expression pattern of Lj3g3v2692990.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v2692990.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.