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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002182
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We have found 683 results. Now displaying 14 of 14 with 50 rows per page. This search has taken 6.245s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi5g1v0240400.2
n.a. Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A072UMY5|A0A072UMY5_MEDTR Disease resistance protein (TIR-NBS-LRR class), putative; Found in the gene: LotjaGi5g1v0240400 LjG1.1_chr5 54856176 54866618 -
2 domain predictions
1 GO term
LotjaGi5g1v0295200.3
n.a. Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|O82500|Y4117_ARATH Putative disease resistance protein At4g11170; TrEMBL-Plants: tr|A0A072UMY5|A0A072UMY5_MEDTR Disease resistance protein (TIR-NBS-LRR class), putative; Found in the gene: LotjaGi5g1v0295200 LjG1.1_chr5 61251974 61261212 -
2 domain predictions
1 GO term
LotjaGi6g1v0004100.1
n.a. Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q9LRR4|R13L1_ARATH Putative disease resistance RPP13-like protein 1; TrEMBL-Plants: tr|A0A072VHI8|A0A072VHI8_MEDTR Disease resistance protein (CC-NBS-LRR class) family protein; Found in the gene: LotjaGi6g1v0004100 LjG1.1_chr6 834591 838251 +
2 domain predictions
1 GO term
LotjaGi6g1v0069800.1
n.a. Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q9LRR4|R13L1_ARATH Putative disease resistance RPP13-like protein 1; TrEMBL-Plants: tr|A0A0B2RBR0|A0A0B2RBR0_GLYSO Putative disease resistance RPP13-like protein 1; Found in the gene: LotjaGi6g1v0069800 LjG1.1_chr6 13319443 13324791 +
2 domain predictions
1 GO term
LotjaGi6g1v0105100.1
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7K9Q6|G7K9Q6_MEDTR Disease resistance protein; Found in the gene: LotjaGi6g1v0105100 LjG1.1_chr6 23132913 23136185 +
2 domain predictions
1 GO term
LotjaGi6g1v0133200.1
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G36930.2 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A072U1J0|A0A072U1J0_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi6g1v0133200 LjG1.1_chr6 38428562 38449952 +
2 domain predictions
1 GO term
LotjaGi6g1v0133200.2
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G36930.2 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A072UH68|A0A072UH68_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi6g1v0133200 LjG1.1_chr6 38438439 38449612 +
2 domain predictions
1 GO term
LotjaGi6g1v0148900.1
n.a. Disease resistance protein; TAIR: AT3G07040.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q39214|RPM1_ARATH Disease resistance protein RPM1; TrEMBL-Plants: tr|G7JA00|G7JA00_MEDTR NB-ARC domain disease resistance protein; Found in the gene: LotjaGi6g1v0148900 LjG1.1_chr6 42430637 42442497 +
2 domain predictions
1 GO term
LotjaGi6g1v0150100_LC.2
n.a. Disease resistance protein; TAIR: AT3G46530.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q9M667|RPP13_ARATH Disease resistance protein RPP13; TrEMBL-Plants: tr|G7J1H5|G7J1H5_MEDTR LRR and NB-ARC domain disease resistance protein; Found in the gene: LotjaGi6g1v0150100_LC LjG1.1_chr6 42607446 42610484 -
2 domain predictions
1 GO term
LotjaGi6g1v0150300.1
n.a. Disease resistance protein; TAIR: AT3G07040.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q39214|RPM1_ARATH Disease resistance protein RPM1; TrEMBL-Plants: tr|G7J1I4|G7J1I4_MEDTR NB-ARC domain disease resistance protein; Found in the gene: LotjaGi6g1v0150300 LjG1.1_chr6 42631060 42635307 -
2 domain predictions
1 GO term
LotjaGi6g1v0150800.1
n.a. Disease resistance protein; TAIR: AT3G07040.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q39214|RPM1_ARATH Disease resistance protein RPM1; TrEMBL-Plants: tr|A0A072UWL3|A0A072UWL3_MEDTR NB-ARC domain disease resistance protein; Found in the gene: LotjaGi6g1v0150800 LjG1.1_chr6 42693106 42696423 +
2 domain predictions
1 GO term
LotjaGi6g1v0150800.2
n.a. Disease resistance protein; TAIR: AT3G07040.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q39214|RPM1_ARATH Disease resistance protein RPM1; TrEMBL-Plants: tr|K7L9X5|K7L9X5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0150800 LjG1.1_chr6 42693832 42696347 +
2 domain predictions
1 GO term
LotjaGi6g1v0166900_LC.1
n.a. NBS-LRR disease resistance protein; TAIR: AT4G19060.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q84WD3|DRL26_ARATH Probable disease resistance protein At4g19060; TrEMBL-Plants: tr|V7BN25|V7BN25_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0166900_LC LjG1.1_chr6 45117950 45119352 -
2 domain predictions
1 GO term
LotjaGi6g1v0183600.1
n.a. Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7IQ97|G7IQ97_MEDTR Disease resistance protein (TIR-NBS-LRR class), putative; Found in the gene: LotjaGi6g1v0183600 LjG1.1_chr6 47662557 47666825 -
2 domain predictions
1 GO term
LotjaGi6g1v0183700.1
n.a. Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7IQ97|G7IQ97_MEDTR Disease resistance protein (TIR-NBS-LRR class), putative; Found in the gene: LotjaGi6g1v0183700 LjG1.1_chr6 47675404 47679755 -
2 domain predictions
1 GO term
LotjaGi6g1v0183700.2
n.a. Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7IQ97|G7IQ97_MEDTR Disease resistance protein (TIR-NBS-LRR class), putative; Found in the gene: LotjaGi6g1v0183700 LjG1.1_chr6 47675512 47679741 -
2 domain predictions
1 GO term
LotjaGi6g1v0193000.1
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|K7K1I4|K7K1I4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0193000 LjG1.1_chr6 48913913 48919109 +
2 domain predictions
1 GO term
LotjaGi6g1v0193000.2
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|K7K1I4|K7K1I4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0193000 LjG1.1_chr6 48913913 48919109 +
2 domain predictions
1 GO term
LotjaGi6g1v0194300_LC.1
n.a. CC-NBS-LRR disease resistance protein; TAIR: AT4G27190.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q9T048|DRL27_ARATH Disease resistance protein At4g27190; TrEMBL-Plants: tr|K7LQ17|K7LQ17_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0194300_LC LjG1.1_chr6 49052552 49070585 -
2 domain predictions
1 GO term
LotjaGi6g1v0194300_LC.2
n.a. CC-NBS-LRR disease resistance protein; TAIR: AT4G27190.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q9T048|DRL27_ARATH Disease resistance protein At4g27190; TrEMBL-Plants: tr|K7LQ17|K7LQ17_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0194300_LC LjG1.1_chr6 49061127 49070525 -
2 domain predictions
1 GO term
LotjaGi6g1v0194500.1
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|K7K1I4|K7K1I4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0194500 LjG1.1_chr6 49071890 49078983 -
2 domain predictions
1 GO term
LotjaGi6g1v0195900.1
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|K7K1I5|K7K1I5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0195900 LjG1.1_chr6 49217978 49229874 -
2 domain predictions
1 GO term
LotjaGi6g1v0201000.1
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|K7K1I4|K7K1I4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0201000 LjG1.1_chr6 49799092 49808513 +
2 domain predictions
1 GO term
LotjaGi6g1v0201000.2
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A151TGL3|A0A151TGL3_CAJCA TMV resistance protein N; Found in the gene: LotjaGi6g1v0201000 LjG1.1_chr6 49801962 49808486 +
2 domain predictions
1 GO term
LotjaGi6g1v0233200.1
n.a. Disease resistance protein (NBS-LRR class) family; TAIR: AT1G50180.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q9SX38|DRL4_ARATH Putative disease resistance protein At1g50180; TrEMBL-Plants: tr|G7IID2|G7IID2_MEDTR Disease resistance protein (CC-NBS-LRR class) family protein; Found in the gene: LotjaGi6g1v0233200 LjG1.1_chr6 54240186 54244553 +
2 domain predictions
1 GO term
LotjaGi6g1v0267100.1
n.a. Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q9LRR4|R13L1_ARATH Putative disease resistance RPP13-like protein 1; TrEMBL-Plants: tr|G7IW90|G7IW90_MEDTR NB-ARC domain disease resistance protein; Found in the gene: LotjaGi6g1v0267100 LjG1.1_chr6 58084425 58092338 +
2 domain predictions
1 GO term
LotjaGi6g1v0267100.2
n.a. Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q9LRR4|R13L1_ARATH Putative disease resistance RPP13-like protein 1; TrEMBL-Plants: tr|G7IW90|G7IW90_MEDTR NB-ARC domain disease resistance protein; Found in the gene: LotjaGi6g1v0267100 LjG1.1_chr6 58084444 58092828 +
2 domain predictions
1 GO term
LotjaGi6g1v0270200.1
n.a. CC-NBS-LRR disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q9LRR4|R13L1_ARATH Putative disease resistance RPP13-like protein 1; TrEMBL-Plants: tr|G7IW90|G7IW90_MEDTR NB-ARC domain disease resistance protein; Found in the gene: LotjaGi6g1v0270200 LjG1.1_chr6 58444015 58455568 -
2 domain predictions
1 GO term
LotjaGi6g1v0281100.1
n.a. Disease resistance protein; TAIR: AT3G07040.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q39214|RPM1_ARATH Disease resistance protein RPM1; TrEMBL-Plants: tr|G7JA00|G7JA00_MEDTR NB-ARC domain disease resistance protein; Found in the gene: LotjaGi6g1v0281100 LjG1.1_chr6 59747571 59759506 -
2 domain predictions
1 GO term
LotjaGi6g1v0281100.2
n.a. Disease resistance protein; TAIR: AT3G07040.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q39214|RPM1_ARATH Disease resistance protein RPM1; TrEMBL-Plants: tr|G7JA00|G7JA00_MEDTR NB-ARC domain disease resistance protein; Found in the gene: LotjaGi6g1v0281100 LjG1.1_chr6 59747571 59759506 -
2 domain predictions
1 GO term
LotjaGi6g1v0327800.2
n.a. Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q9LRR4|R13L1_ARATH Putative disease resistance RPP13-like protein 1; TrEMBL-Plants: tr|G7IW90|G7IW90_MEDTR NB-ARC domain disease resistance protein; Found in the gene: LotjaGi6g1v0327800 LjG1.1_chr6 64272306 64281779 +
2 domain predictions
1 GO term
LotjaGi6g1v0332700.1
n.a. Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q9LRR4|R13L1_ARATH Putative disease resistance RPP13-like protein 1; TrEMBL-Plants: tr|G7IW90|G7IW90_MEDTR NB-ARC domain disease resistance protein; Found in the gene: LotjaGi6g1v0332700 LjG1.1_chr6 64756411 64762143 +
2 domain predictions
1 GO term
LotjaGi6g1v0352100.2
n.a. Disease resistance protein; TAIR: AT4G27190.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q9T048|DRL27_ARATH Disease resistance protein At4g27190; TrEMBL-Plants: tr|V7BKF5|V7BKF5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0352100 LjG1.1_chr6 66425868 66431993 -
2 domain predictions
1 GO term