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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002182
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 683 results. Now displaying 6 of 14 with 50 rows per page. This search has taken 5.731s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj3g3v0744680.1
n.a. TMV resistance protein N [Medicago truncatula] gi|357461481|ref|XP_003601022.1| chr3 8553622 8554371 -
2 domain predictions
1 GO term
Lj3g3v0765980.1
n.a. NBS-containing resistance-like protein, partial [Medicago truncatula] gi|357471449|ref|XP_003606009.1| chr3 9111357 9112675 -
2 domain predictions
1 GO term
Lj3g3v1048920.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356506581|ref|XP_003522058.1| chr3 13854639 13878653 +
2 domain predictions
1 GO term
Lj3g3v1048920.2
n.a. TMV resistance protein N [Medicago truncatula] gi|357509247|ref|XP_003624912.1| chr3 13854639 13890166 +
2 domain predictions
1 GO term
Lj3g3v1048920.3
n.a. TMV resistance protein N [Medicago truncatula] gi|357509247|ref|XP_003624912.1| chr3 13855063 13877954 +
2 domain predictions
1 GO term
Lj3g3v1101570.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356545124|ref|XP_003540995.1| chr3 14669025 14672363 +
2 domain predictions
1 GO term
Lj3g3v1376940.1
n.a. Tir-nbs-lrr resistance protein [Medicago truncatula] gi|357474671|ref|XP_003607620.1| chr3 17524208 17529557 -
2 domain predictions
1 GO term
Lj3g3v1381500.1
n.a. Tir-nbs-lrr resistance protein [Medicago truncatula] gi|357468519|ref|XP_003604544.1| chr3 17691002 17695459 -
2 domain predictions
1 GO term
Lj3g3v1381500.2
n.a. Tir-nbs-lrr resistance protein [Medicago truncatula] gi|357468519|ref|XP_003604544.1| chr3 17691002 17695459 -
2 domain predictions
1 GO term
Lj3g3v1556600.2
n.a. TMV resistance protein N-like [Glycine max] gi|359806248|ref|NP_001241468.1| chr3 19840722 19845208 -
2 domain predictions
1 GO term
Lj3g3v1567740.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356506581|ref|XP_003522058.1| chr3 19883317 19903928 +
2 domain predictions
1 GO term
Lj3g3v1567740.3
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356506581|ref|XP_003522058.1| chr3 19894323 19903928 +
2 domain predictions
1 GO term
Lj3g3v1631880.1
n.a. Disease resistance-like protein 17-12 [Medicago truncatula] gi|357486061|ref|XP_003613318.1| chr3 20776689 20779288 -
2 domain predictions
1 GO term
Lj3g3v1844260.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356560721|ref|XP_003548637.1| chr3 23567858 23573568 +
2 domain predictions
1 GO term
Lj3g3v1876100.1
n.a. Disease resistance protein RPM1 [Medicago truncatula] gi|357515045|ref|XP_003627811.1| chr3 24114776 24122946 +
2 domain predictions
1 GO term
Lj3g3v1931840.1
n.a. Tir-nbs resistance protein [Theobroma cacao] gi|508719941|gb|EOY11838.1| chr3 24853602 24857671 -
2 domain predictions
1 GO term
Lj3g3v2665420.1
n.a. Nbs-lrr resistance protein [Medicago truncatula] gi|357513731|ref|XP_003627154.1| chr3 32525785 32531307 +
2 domain predictions
1 GO term
Lj3g3v2665430.1
n.a. Nbs-lrr resistance protein [Medicago truncatula] gi|357513731|ref|XP_003627154.1| chr3 32531498 32543438 +
2 domain predictions
1 GO term
Lj3g3v2666470.1
n.a. Nbs-lrr resistance protein [Medicago truncatula] gi|357513731|ref|XP_003627154.1| chr3 32545590 32551665 +
2 domain predictions
1 GO term
Lj3g3v2666490.1
n.a. Nbs-lrr resistance protein [Medicago truncatula] gi|357513731|ref|XP_003627154.1| chr3 32561159 32568241 -
2 domain predictions
1 GO term
Lj3g3v2667550.1
n.a. NBS resistance protein [Medicago truncatula] gi|357513713|ref|XP_003627145.1| chr3 32584795 32590437 -
2 domain predictions
1 GO term
Lj3g3v2692930.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356554611|ref|XP_003545638.1| chr3 32771071 32777101 +
2 domain predictions
1 GO term
Lj3g3v2984970.1
n.a. NB-LRR type disease resistance protein Rps1-k-2 [Medicago truncatula] gi|357457003|ref|XP_003598782.1| chr3 36930498 36933662 -
2 domain predictions
1 GO term
Lj3g3v3486820.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357493209|ref|XP_003616893.1| chr3 42450114 42452162 -
2 domain predictions
1 GO term
Lj3g3v3639910.1
n.a. PREDICTED: probable disease resistance RPP8-like protein 2-like [Cicer arietinum] gi|502144957|ref|XP_004505810.1| chr3 44302860 44309882 +
2 domain predictions
1 GO term
Lj4g3v0176460.1
n.a. PREDICTED: probable disease resistance protein At5g66900-like [Glycine max] gi|356565670|ref|XP_003551061.1| chr4 2143510 2147988 +
2 domain predictions
1 GO term
Lj4g3v0216690.1
n.a. NBS-LRR resistance protein [Medicago truncatula] gi|357490973|ref|XP_003615774.1| chr4 2751288 2755442 -
2 domain predictions
1 GO term
Lj4g3v0216690.2
n.a. NBS-LRR resistance protein [Medicago truncatula] gi|357490837|ref|XP_003615706.1| chr4 2751288 2755442 -
2 domain predictions
1 GO term
Lj4g3v0286230.1
n.a. PREDICTED: disease resistance protein RGA2-like [Vitis vinifera] gi|359491491|ref|XP_003634282.1| chr4 3490569 3494256 -
2 domain predictions
1 GO term
Lj4g3v0445350.1
n.a. Disease resistance protein [Medicago truncatula] gi|357475945|ref|XP_003608258.1| chr4 5755330 5760121 +
2 domain predictions
1 GO term
Lj4g3v0445350.2
n.a. Disease resistance protein [Medicago truncatula] gi|357475945|ref|XP_003608258.1| chr4 5755373 5762842 +
2 domain predictions
1 GO term
Lj4g3v0445360.1
n.a. Disease resistance protein [Medicago truncatula] gi|357475945|ref|XP_003608258.1| chr4 5760331 5762842 +
2 domain predictions
1 GO term
Lj4g3v0446720.1
n.a. Disease resistance protein [Medicago truncatula] gi|357475945|ref|XP_003608258.1| chr4 5992321 5996866 -
2 domain predictions
1 GO term
Lj4g3v1539310.1
n.a. Disease resistance RPP8-like protein [Medicago truncatula] gi|357514005|ref|XP_003627291.1| chr4 23111157 23116016 +
2 domain predictions
1 GO term
Lj4g3v1983480.1
n.a. n.a. chr4 27593378 27599909 -
2 domain predictions
1 GO term
Lj4g3v2645200.1
n.a. NB-ARC domain-containing disease resistance protein isoform 1 [Theobroma cacao] gi|508705086|gb|EOX96982.1| chr4 36012779 36019188 -
2 domain predictions
1 GO term
Lj4g3v2645210.1
n.a. Uncharacterized protein TCM_006100 [Theobroma cacao] gi|508705085|gb|EOX96981.1| chr4 36020340 36024651 +
2 domain predictions
1 GO term
Lj4g3v3099550.1
n.a. disease resistance protein [Phaseolus vulgaris] gi|74231152|gb|ABA00702.1| chr4 41315105 41320386 -
2 domain predictions
1 GO term
Lj4g3v3099550.3
n.a. disease resistance protein [Phaseolus vulgaris] gi|74231152|gb|ABA00702.1| chr4 41315105 41320386 -
2 domain predictions
1 GO term
Lj5g3v0067690.1
n.a. PREDICTED: probable disease resistance protein At4g33300-like [Cicer arietinum] gi|502125876|ref|XP_004499098.1| chr5 283432 287050 +
2 domain predictions
1 GO term
Lj5g3v0067720.1
n.a. PREDICTED: probable disease resistance protein At4g33300-like [Glycine max] gi|356552170|ref|XP_003544442.1| chr5 292737 296223 +
2 domain predictions
1 GO term
Lj5g3v0067720.2
n.a. PREDICTED: probable disease resistance protein At4g33300-like [Glycine max] gi|356552170|ref|XP_003544442.1| chr5 292737 296223 +
2 domain predictions
1 GO term
Lj5g3v0089470.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356545124|ref|XP_003540995.1| chr5 660669 670778 -
2 domain predictions
1 GO term
Lj5g3v0528930.1
n.a. NBS-LRR resistance protein [Medicago truncatula] gi|357490823|ref|XP_003615699.1| chr5 5807441 5808272 -
2 domain predictions
1 GO term
Lj5g3v0670560.1
n.a. PREDICTED: probable disease resistance RPP8-like protein 2-like [Cicer arietinum] gi|502144957|ref|XP_004505810.1| chr5 9704199 9705325 +
2 domain predictions
1 GO term
Lj5g3v0747210.1
n.a. PREDICTED: disease resistance protein RPM1-like [Glycine max] gi|356566610|ref|XP_003551523.1| chr5 11013331 11016221 -
2 domain predictions
1 GO term
Lj5g3v0875650.1
n.a. NBS-LRR resistance-like protein 4G [Medicago truncatula] gi|357515077|ref|XP_003627827.1| chr5 12748785 12757034 +
2 domain predictions
1 GO term
Lj5g3v1665180.1
n.a. PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Glycine max] gi|356557333|ref|XP_003546971.1| chr5 23755779 23758274 -
2 domain predictions
1 GO term
Lj6g3v0025650.1
n.a. Disease resistance protein I-2 [Medicago truncatula] gi|358346964|ref|XP_003637533.1| chr6 353015 356527 +
2 domain predictions
1 GO term
Lj6g3v0792050.1
n.a. Cc-nbs resistance protein [Medicago truncatula] gi|357459895|ref|XP_003600228.1| chr6 7802797 7803824 +
2 domain predictions
1 GO term