Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002772
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 64 results. Now displaying 2 of 2 with 50 rows per page. This search has taken 5.322s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi5g1v0322400.1
n.a. Beta xylosidase; TAIR: AT3G19620.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|Q9LJN4|BXL5_ARATH Probable beta-D-xylosidase 5; TrEMBL-Plants: tr|K7N397|K7N397_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0322400 LjG1.1_chr5 64092631 64096564 -
2 domain predictions
2 GO terms
LotjaGi6g1v0132600.1
n.a. Beta-glucosidase; TAIR: AT3G47000.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|A0A072UWG8|A0A072UWG8_MEDTR Glycoside hydrolase family 3 protein; Found in the gene: LotjaGi6g1v0132600 LjG1.1_chr6 38183664 38188791 -
2 domain predictions
2 GO terms
LotjaGi6g1v0193100.1
n.a. Beta-glucosidase; TAIR: AT5G20950.3 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|G7J6L9|G7J6L9_MEDTR Glycoside hydrolase family 3 protein; Found in the gene: LotjaGi6g1v0193100 LjG1.1_chr6 48921596 48927302 -
2 domain predictions
2 GO terms
LotjaGi6g1v0193100.2
n.a. Beta-glucosidase; TAIR: AT5G20950.3 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|G7J6L9|G7J6L9_MEDTR Glycoside hydrolase family 3 protein; Found in the gene: LotjaGi6g1v0193100 LjG1.1_chr6 48922406 48927325 -
2 domain predictions
2 GO terms
LotjaGi6g1v0193100.3
n.a. Beta-glucosidase; TAIR: AT5G20950.3 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|G7J6L9|G7J6L9_MEDTR Glycoside hydrolase family 3 protein; Found in the gene: LotjaGi6g1v0193100 LjG1.1_chr6 48922756 48926836 -
2 domain predictions
2 GO terms
LotjaGi6g1v0193100.4
n.a. Beta-glucosidase; TAIR: AT5G20950.3 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|G7J6L9|G7J6L9_MEDTR Glycoside hydrolase family 3 protein; Found in the gene: LotjaGi6g1v0193100 LjG1.1_chr6 48922756 48926891 -
2 domain predictions
2 GO terms
LotjaGi6g1v0256100.1
n.a. Beta xylosidase; TAIR: AT5G49360.1 beta-xylosidase 1; Swiss-Prot: sp|Q9FGY1|BXL1_ARATH Beta-D-xylosidase 1; TrEMBL-Plants: tr|A0A1J7FUN8|A0A1J7FUN8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0256100 LjG1.1_chr6 56891281 56898246 -
2 domain predictions
2 GO terms
LotjaGi6g1v0256100.2
n.a. Beta xylosidase; TAIR: AT5G49360.1 beta-xylosidase 1; Swiss-Prot: sp|Q9FGY1|BXL1_ARATH Beta-D-xylosidase 1; TrEMBL-Plants: tr|A0A1J7FUN8|A0A1J7FUN8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0256100 LjG1.1_chr6 56891640 56898048 -
2 domain predictions
2 GO terms
LotjaGi6g1v0256100.3
n.a. Beta xylosidase; TAIR: AT5G49360.1 beta-xylosidase 1; Swiss-Prot: sp|Q9FGY1|BXL1_ARATH Beta-D-xylosidase 1; TrEMBL-Plants: tr|A0A1J7FUN8|A0A1J7FUN8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0256100 LjG1.1_chr6 56892082 56898020 -
2 domain predictions
2 GO terms
LotjaGi6g1v0271900.1
n.a. Beta-glucosidase; TAIR: AT5G04885.2 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|A0A0S3S4G2|A0A0S3S4G2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0271900 LjG1.1_chr6 58660981 58668638 +
2 domain predictions
2 GO terms
LotjaGi6g1v0271900.2
n.a. Beta-glucosidase; TAIR: AT5G04885.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|A0A0S3S4G2|A0A0S3S4G2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0271900 LjG1.1_chr6 58661016 58667175 +
2 domain predictions
2 GO terms
LotjaGi6g1v0354900.1
n.a. Beta xylosidase; TAIR: AT5G64570.1 beta-D-xylosidase 4; Swiss-Prot: sp|A5JTQ2|XYL1_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 1; TrEMBL-Plants: tr|A0A151T7T5|A0A151T7T5_CAJCA Beta-D-xylosidase 4; Found in the gene: LotjaGi6g1v0354900 LjG1.1_chr6 66674548 66682182 +
2 domain predictions
2 GO terms
LotjaGi6g1v0354900.2
n.a. Beta xylosidase; TAIR: AT5G09730.1 beta-xylosidase 3; Swiss-Prot: sp|Q9LXD6|BXL3_ARATH Beta-D-xylosidase 3; TrEMBL-Plants: tr|I1KR53|I1KR53_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0354900 LjG1.1_chr6 66675314 66679613 +
2 domain predictions
2 GO terms
LotjaGi6g1v0354900.3
n.a. Beta xylosidase; TAIR: AT5G64570.1 beta-D-xylosidase 4; Swiss-Prot: sp|A5JTQ2|XYL1_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 1; TrEMBL-Plants: tr|A0A151T7T5|A0A151T7T5_CAJCA Beta-D-xylosidase 4; Found in the gene: LotjaGi6g1v0354900 LjG1.1_chr6 66675339 66679613 +
2 domain predictions
2 GO terms