Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR006379
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 70 results. Now displaying 2 of 2 with 50 rows per page. This search has taken 7.668s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi4g1v0164200.1
n.a. Trehalose-6-phosphate synthase; TAIR: AT1G23870.1 trehalose-phosphatase/synthase 9; Swiss-Prot: sp|Q9LRA7|TPS9_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP]-forming] 9; TrEMBL-Plants: tr|A0A151S1X1|A0A151S1X1_CAJCA Putative alpha,alpha-trehalose-phosphate synthase [UDP]-forming] 10; Found in the gene: LotjaGi4g1v0164200 LjG1.1_chr4 30949027 30954359 -
2 domain predictions
 –
LotjaGi4g1v0164200.2
n.a. Trehalose-6-phosphate synthase; TAIR: AT1G23870.1 trehalose-phosphatase/synthase 9; Swiss-Prot: sp|Q9LRA7|TPS9_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP]-forming] 9; TrEMBL-Plants: tr|A0A151S1X1|A0A151S1X1_CAJCA Putative alpha,alpha-trehalose-phosphate synthase [UDP]-forming] 10; Found in the gene: LotjaGi4g1v0164200 LjG1.1_chr4 30949045 30954359 -
2 domain predictions
 –
LotjaGi4g1v0208600.1
n.a. Trehalose 6-phosphate phosphatase; TAIR: AT4G22590.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q9SUW0|TPPG_ARATH Probable trehalose-phosphate phosphatase G; TrEMBL-Plants: tr|V7CFF0|V7CFF0_PHAVU Trehalose 6-phosphate phosphatase; Found in the gene: LotjaGi4g1v0208600 LjG1.1_chr4 48405409 48410630 -
2 domain predictions
 –
LotjaGi4g1v0208600.2
n.a. Trehalose 6-phosphate phosphatase; TAIR: AT4G22590.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q9SUW0|TPPG_ARATH Probable trehalose-phosphate phosphatase G; TrEMBL-Plants: tr|A0A0L9TR07|A0A0L9TR07_PHAAN Trehalose 6-phosphate phosphatase; Found in the gene: LotjaGi4g1v0208600 LjG1.1_chr4 48405409 48410630 -
2 domain predictions
 –
LotjaGi4g1v0208600.3
n.a. Trehalose 6-phosphate phosphatase; TAIR: AT4G22590.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q9SUW0|TPPG_ARATH Probable trehalose-phosphate phosphatase G; TrEMBL-Plants: tr|A0A0L9TR07|A0A0L9TR07_PHAAN Trehalose 6-phosphate phosphatase; Found in the gene: LotjaGi4g1v0208600 LjG1.1_chr4 48406088 48410197 -
2 domain predictions
 –
LotjaGi4g1v0295200.1
n.a. Trehalose-6-phosphate synthase; TAIR: AT2G18700.1 trehalose phosphatase/synthase 11; Swiss-Prot: sp|Q9ZV48|TPS11_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP]-forming] 11; TrEMBL-Plants: tr|V7C9K3|V7C9K3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0295200 LjG1.1_chr4 66784704 66788401 +
2 domain predictions
 –
LotjaGi4g1v0399100.1
n.a. Trehalose 6-phosphate phosphatase; TAIR: AT5G65140.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q5HZ05|TPPJ_ARATH Probable trehalose-phosphate phosphatase J; TrEMBL-Plants: tr|V7CQK2|V7CQK2_PHAVU Trehalose 6-phosphate phosphatase; Found in the gene: LotjaGi4g1v0399100 LjG1.1_chr4 77646015 77649229 -
2 domain predictions
 –
LotjaGi4g1v0399100.2
n.a. Trehalose 6-phosphate phosphatase; TAIR: AT5G65140.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q5HZ05|TPPJ_ARATH Probable trehalose-phosphate phosphatase J; TrEMBL-Plants: tr|V7CQK2|V7CQK2_PHAVU Trehalose 6-phosphate phosphatase; Found in the gene: LotjaGi4g1v0399100 LjG1.1_chr4 77646381 77648794 -
2 domain predictions
 –
LotjaGi4g1v0458400.1
n.a. Trehalose-phosphate synthase 6; TAIR: AT1G68020.2 UDP-Glycosyltransferase / trehalose-phosphatase family protein; Swiss-Prot: sp|Q94AH8|TPS6_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP]-forming] 6; TrEMBL-Plants: tr|G7LBG6|G7LBG6_MEDTR Trehalose-6-phosphate synthase domain protein; Found in the gene: LotjaGi4g1v0458400 LjG1.1_chr4 82937030 82942073 -
2 domain predictions
 –
LotjaGi5g1v0108200.1
n.a. Sucrose-phosphatase; TAIR: AT2G35840.1 Sucrose-6F-phosphate phosphohydrolase family protein; Swiss-Prot: sp|Q5IH14|SPP1_TOBAC Sucrose-phosphatase 1; TrEMBL-Plants: tr|I3SAL2|I3SAL2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0108200 LjG1.1_chr5 20577442 20580930 -
2 domain predictions
 –
LotjaGi5g1v0336500.1
n.a. Trehalose-6-phosphate synthase, putative; TAIR: AT4G17770.1 trehalose phosphatase/synthase 5; Swiss-Prot: sp|O23617|TPS5_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP]-forming] 5; TrEMBL-Plants: tr|I1NFN9|I1NFN9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0336500 LjG1.1_chr5 65375662 65380697 -
2 domain predictions
 –
LotjaGi5g1v0336500.2
n.a. Trehalose-6-phosphate synthase, putative; TAIR: AT4G17770.1 trehalose phosphatase/synthase 5; Swiss-Prot: sp|O23617|TPS5_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP]-forming] 5; TrEMBL-Plants: tr|I1NFN9|I1NFN9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0336500 LjG1.1_chr5 65375683 65380543 -
2 domain predictions
 –
LotjaGi5g1v0336500.3
n.a. Trehalose-6-phosphate synthase, putative; TAIR: AT4G17770.1 trehalose phosphatase/synthase 5; Swiss-Prot: sp|O23617|TPS5_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP]-forming] 5; TrEMBL-Plants: tr|I1NFN9|I1NFN9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0336500 LjG1.1_chr5 65376178 65379310 -
2 domain predictions
 –
LotjaGi6g1v0015900.1
n.a. Sucrose phosphatase; TAIR: AT2G35840.1 Sucrose-6F-phosphate phosphohydrolase family protein; Swiss-Prot: sp|Q5IH14|SPP1_TOBAC Sucrose-phosphatase 1; TrEMBL-Plants: tr|G7IDI2|G7IDI2_MEDTR Sucrose phosphate phosphatase; Found in the gene: LotjaGi6g1v0015900 LjG1.1_chr6 2803795 2812487 -
2 domain predictions
 –
LotjaGi6g1v0015900.3
n.a. Sucrose phosphatase; TAIR: AT2G35840.1 Sucrose-6F-phosphate phosphohydrolase family protein; Swiss-Prot: sp|Q5IH13|SPP2_TOBAC Sucrose-phosphatase 2; TrEMBL-Plants: tr|G7IDI2|G7IDI2_MEDTR Sucrose phosphate phosphatase; Found in the gene: LotjaGi6g1v0015900 LjG1.1_chr6 2804329 2812507 -
2 domain predictions
 –
LotjaGi6g1v0015900.4
n.a. Sucrose phosphatase; TAIR: AT2G35840.1 Sucrose-6F-phosphate phosphohydrolase family protein; Swiss-Prot: sp|Q5IH14|SPP1_TOBAC Sucrose-phosphatase 1; TrEMBL-Plants: tr|G7IDI2|G7IDI2_MEDTR Sucrose phosphate phosphatase; Found in the gene: LotjaGi6g1v0015900 LjG1.1_chr6 2804329 2812507 -
2 domain predictions
 –
LotjaGi6g1v0015900.5
n.a. Sucrose phosphatase; TAIR: AT2G35840.1 Sucrose-6F-phosphate phosphohydrolase family protein; Swiss-Prot: sp|Q5IH14|SPP1_TOBAC Sucrose-phosphatase 1; TrEMBL-Plants: tr|G7IDI2|G7IDI2_MEDTR Sucrose phosphate phosphatase; Found in the gene: LotjaGi6g1v0015900 LjG1.1_chr6 2804806 2811964 -
2 domain predictions
 –
LotjaGi6g1v0015900.6
n.a. Sucrose phosphatase; TAIR: AT2G35840.1 Sucrose-6F-phosphate phosphohydrolase family protein; Swiss-Prot: sp|Q5IH14|SPP1_TOBAC Sucrose-phosphatase 1; TrEMBL-Plants: tr|G7IDI2|G7IDI2_MEDTR Sucrose phosphate phosphatase; Found in the gene: LotjaGi6g1v0015900 LjG1.1_chr6 2809357 2812050 -
2 domain predictions
 –
LotjaGi6g1v0086300.1
n.a. Trehalose 6-phosphate phosphatase; TAIR: AT5G65140.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q5HZ05|TPPJ_ARATH Probable trehalose-phosphate phosphatase J; TrEMBL-Plants: tr|I1LNL8|I1LNL8_SOYBN Trehalose 6-phosphate phosphatase; Found in the gene: LotjaGi6g1v0086300 LjG1.1_chr6 17236239 17239948 +
2 domain predictions
 –
LotjaGi6g1v0086300.2
n.a. Trehalose 6-phosphate phosphatase; TAIR: AT5G65140.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q5HZ05|TPPJ_ARATH Probable trehalose-phosphate phosphatase J; TrEMBL-Plants: tr|A0A0L9UAW9|A0A0L9UAW9_PHAAN Trehalose 6-phosphate phosphatase; Found in the gene: LotjaGi6g1v0086300 LjG1.1_chr6 17236276 17240055 +
2 domain predictions
 –