Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR011598
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 386 results. Now displaying 2 of 8 with 50 rows per page. This search has taken 7.886s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v0426840.1
n.a. PREDICTED: transcription factor bHLH79-like [Glycine max] gi|356516734|ref|XP_003527048.1| chr1 5907722 5912782 -
6 domain predictions
1 GO term
Lj1g3v0947460.1
n.a. PREDICTED: transcription factor SPEECHLESS-like [Glycine max] gi|356509301|ref|XP_003523389.1| chr1 11798767 11801775 +
6 domain predictions
1 GO term
Lj1g3v1303700.1
n.a. PREDICTED: transcription factor HEC3-like [Cicer arietinum] gi|502140224|ref|XP_004504117.1| chr1 15614660 15616168 +
6 domain predictions
1 GO term
Lj1g3v1452960.1
n.a. PREDICTED: transcription factor ICE1-like [Cicer arietinum] gi|502133394|ref|XP_004501748.1| chr1 17418119 17422484 -
6 domain predictions
1 GO term
Lj1g3v1464130.1
n.a. PREDICTED: transcription factor bHLH137-like [Glycine max] gi|356507384|ref|XP_003522447.1| chr1 17493409 17496049 +
6 domain predictions
1 GO term
Lj1g3v1525930.1
n.a. PREDICTED: transcription factor bHLH96-like [Glycine max] gi|356552929|ref|XP_003544814.1| chr1 18100398 18102317 -
6 domain predictions
1 GO term
Lj1g3v1525930.2
n.a. PREDICTED: transcription factor bHLH96-like [Glycine max] gi|356552929|ref|XP_003544814.1| chr1 18100398 18102317 -
6 domain predictions
1 GO term
Lj1g3v1651330.1
n.a. PREDICTED: transcription factor HEC1 [Vitis vinifera] gi|225458639|ref|XP_002282817.1| chr1 19849499 19849847 -
6 domain predictions
1 GO term
Lj1g3v2098310.1
n.a. PREDICTED: transcription factor bHLH93-like [Glycine max] gi|356515677|ref|XP_003526525.1| chr1 25238095 25240208 -
6 domain predictions
1 GO term
Lj1g3v2372350.1
n.a. LAX [Medicago truncatula] gi|357506069|ref|XP_003623323.1| chr1 27841705 27842551 -
6 domain predictions
1 GO term
Lj1g3v2446010.1
n.a. Transcription factor bHLH61 isoform 1 [Theobroma cacao] gi|508710735|gb|EOY02632.1| chr1 28569249 28570699 +
3 domain predictions
1 GO term
Lj1g3v2883900.1
n.a. PREDICTED: transcription factor bHLH25-like isoform X1 [Cicer arietinum] gi|502106194|ref|XP_004492885.1| chr1 32529777 32535122 +
6 domain predictions
1 GO term
Lj1g3v3078240.1
n.a. PREDICTED: transcription factor BIM3-like [Glycine max] gi|356526565|ref|XP_003531887.1| chr1 35039588 35044080 -
6 domain predictions
1 GO term
Lj1g3v3444270.2
n.a. PREDICTED: transcription factor bHLH155-like [Cicer arietinum] gi|502179450|ref|XP_004516433.1| chr1 39954727 39961600 +
2 domain predictions
1 GO term
Lj1g3v3444270.3
n.a. PREDICTED: transcription factor bHLH155-like [Cicer arietinum] gi|502179450|ref|XP_004516433.1| chr1 39954727 39955527 +
2 domain predictions
1 GO term
Lj1g3v3580670.1
n.a. PREDICTED: transcription factor bHLH62-like [Glycine max] gi|356527316|ref|XP_003532257.1| chr1 41149465 41153072 -
6 domain predictions
1 GO term
Lj1g3v3904220.1
n.a. PREDICTED: transcription factor ICE1-like isoform X2 [Cicer arietinum] gi|502106828|ref|XP_004493069.1| chr1 45376217 45379679 +
6 domain predictions
1 GO term
Lj1g3v4107000.1
n.a. Transcription factor bHLH106 [Medicago truncatula] gi|357509333|ref|XP_003624955.1| chr1 48789650 48791224 +
6 domain predictions
1 GO term
Lj1g3v4290130.2
n.a. PREDICTED: transcription factor bHLH48-like [Glycine max] gi|356504821|ref|XP_003521193.1| chr1 50570332 50575213 -
6 domain predictions
1 GO term
Lj1g3v4302180.1
n.a. PREDICTED: transcription factor bHLH130-like isoform X1 [Cicer arietinum] gi|502109029|ref|XP_004493549.1| chr1 50600373 50601211 +
6 domain predictions
1 GO term
Lj1g3v4450440.1
n.a. PREDICTED: transcription factor UNE12-like [Glycine max] gi|356572238|ref|XP_003554277.1| chr1 52182634 52187167 +
6 domain predictions
1 GO term
Lj1g3v4480280.1
n.a. n.a. chr1 52432656 52436841 -
6 domain predictions
1 GO term
Lj1g3v4480290.2
n.a. PREDICTED: transcription factor bHLH3-like [Cicer arietinum] gi|502109918|ref|XP_004493757.1| chr1 52432769 52436045 +
2 domain predictions
1 GO term
Lj1g3v4483600.1
n.a. PREDICTED: transcription factor bHLH155-like isoform X2 [Cicer arietinum] gi|502115042|ref|XP_004495112.1| chr1 52559398 52561450 -
4 domain predictions
1 GO term
Lj1g3v4830130.1
n.a. Transcription factor SPATULA [Medicago truncatula] gi|357511583|ref|XP_003626080.1| chr1 58260236 58262669 -
6 domain predictions
1 GO term
Lj1g3v4954920.1
n.a. PREDICTED: transcription factor bHLH96-like [Glycine max] gi|356573022|ref|XP_003554664.1| chr1 60137594 60139179 +
6 domain predictions
1 GO term
Lj2g3v0463790.1
n.a. PREDICTED: transcription factor bHLH126-like [Glycine max] gi|356530923|ref|XP_003534028.1| chr2 6670113 6672014 -
6 domain predictions
1 GO term
Lj2g3v0473830.1
n.a. PREDICTED: transcription factor bHLH126-like [Glycine max] gi|356559901|ref|XP_003548234.1| chr2 6691304 6693183 -
6 domain predictions
1 GO term
Lj2g3v0813500.1
n.a. PREDICTED: transcription factor bHLH68-like isoform 1 [Glycine max] gi|356523767|ref|XP_003530506.1| chr2 12799144 12804403 -
4 domain predictions
1 GO term
Lj2g3v1035930.1
n.a. PREDICTED: transcription factor bHLH135-like [Glycine max] gi|356550791|ref|XP_003543767.1| chr2 16666820 16669209 -
5 domain predictions
1 GO term
Lj2g3v1172460.1
n.a. PREDICTED: transcription factor bHLH30-like [Glycine max] gi|356495996|ref|XP_003516856.1| chr2 18571220 18574313 -
6 domain predictions
1 GO term
Lj2g3v1193050.1
n.a. PREDICTED: transcription factor FAMA-like [Glycine max] gi|356502696|ref|XP_003520153.1| chr2 18884023 18886992 +
6 domain predictions
1 GO term
Lj2g3v1200030.1
n.a. PREDICTED: transcription factor bHLH49-like [Glycine max] gi|356502674|ref|XP_003520142.1| chr2 19225762 19229975 +
6 domain predictions
1 GO term
Lj2g3v1278950.1
n.a. PREDICTED: transcription factor DYSFUNCTIONAL TAPETUM 1-like [Glycine max] gi|356557627|ref|XP_003547117.1| chr2 20526300 20527581 -
6 domain predictions
1 GO term
Lj2g3v1278950.2
n.a. PREDICTED: transcription factor DYSFUNCTIONAL TAPETUM 1-like [Glycine max] gi|356557625|ref|XP_003547116.1| chr2 20526300 20528504 -
6 domain predictions
1 GO term
Lj2g3v1351570.1
n.a. PREDICTED: transcription factor BPE-like [Glycine max] gi|356498105|ref|XP_003517894.1| chr2 21319580 21323463 +
6 domain predictions
1 GO term
Lj2g3v1451710.1
n.a. PREDICTED: transcription factor bHLH131-like [Cicer arietinum] gi|502092741|ref|XP_004489760.1| chr2 22814901 22816528 -
6 domain predictions
1 GO term
Lj2g3v1468080.1
n.a. PREDICTED: transcription factor bHLH93-like [Glycine max] gi|356496600|ref|XP_003517154.1| chr2 23312504 23314710 +
6 domain predictions
1 GO term
Lj2g3v1468080.2
n.a. PREDICTED: transcription factor bHLH93-like [Glycine max] gi|356496600|ref|XP_003517154.1| chr2 23312504 23314710 +
6 domain predictions
1 GO term
Lj2g3v1468080.3
n.a. PREDICTED: transcription factor bHLH93-like [Glycine max] gi|356496600|ref|XP_003517154.1| chr2 23312643 23314710 +
6 domain predictions
1 GO term
Lj2g3v1468530.1
n.a. PREDICTED: transcription factor MYC2-like [Glycine max] gi|356497663|ref|XP_003517679.1| chr2 23505679 23509193 -
6 domain predictions
1 GO term
Lj2g3v1468540.1
n.a. PREDICTED: transcription factor MYC2-like [Glycine max] gi|356497663|ref|XP_003517679.1| chr2 23506992 23509193 -
6 domain predictions
1 GO term
Lj2g3v1471910.1
n.a. PREDICTED: transcription factor bHLH96-like [Glycine max] gi|356526709|ref|XP_003531959.1| chr2 23594637 23596943 -
6 domain predictions
1 GO term
Lj2g3v1879750.1
n.a. PREDICTED: transcription factor HEC1-like [Glycine max] gi|356541813|ref|XP_003539367.1| chr2 27999409 28000480 +
6 domain predictions
1 GO term
Lj2g3v1890910.1
n.a. Transcription factor SPATULA [Medicago truncatula] gi|357482855|ref|XP_003611714.1| chr2 28093307 28096098 -
6 domain predictions
1 GO term
Lj2g3v1984450.1
n.a. PREDICTED: transcription factor bHLH25-like [Glycine max] gi|356495525|ref|XP_003516627.1| chr2 29047112 29048675 -
6 domain predictions
1 GO term
Lj2g3v1984540.1
n.a. Transcription factor bHLH25 [Medicago truncatula] gi|357482425|ref|XP_003611499.1| chr2 29077442 29080029 -
3 domain predictions
1 GO term
Lj2g3v1984550.1
n.a. Transcription factor bHLH25 [Medicago truncatula] gi|357482425|ref|XP_003611499.1| chr2 29077976 29080029 -
6 domain predictions
1 GO term
Lj2g3v1984620.1
n.a. PREDICTED: transcription factor bHLH18-like [Glycine max] gi|356563474|ref|XP_003549987.1| chr2 29105943 29108719 -
6 domain predictions
1 GO term
Lj2g3v2151670.1
n.a. PREDICTED: transcription factor bHLH93-like [Glycine max] gi|356552989|ref|XP_003544841.1| chr2 32482319 32484242 +
6 domain predictions
1 GO term