Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.
We have found 320 results. Now displaying 7 of 7 with 50 rows per page. This search has taken 6.927s to perform.
| Transcript | Name | Description | Chr | Start | End | Strand | Domain predictions | GO predictions |
|---|---|---|---|---|---|---|---|---|
| n.a. | Polyubiquitin; TAIR: AT4G05320.1 polyubiquitin 10; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|K3YR52|K3YR52_SETIT Uncharacterized protein; Found in the gene: LotjaGi5g1v0317900 | LjG1.1_chr5 | 63554707 | 63555949 | - | – | ||
| n.a. | Polyubiquitin; TAIR: AT4G05320.1 polyubiquitin 10; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|K3YR52|K3YR52_SETIT Uncharacterized protein; Found in the gene: LotjaGi5g1v0317900 | LjG1.1_chr5 | 63554707 | 63556150 | - | – | ||
| n.a. | Polyubiquitin; TAIR: AT4G05320.1 polyubiquitin 10; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|K3YR52|K3YR52_SETIT Uncharacterized protein; Found in the gene: LotjaGi5g1v0317900 | LjG1.1_chr5 | 63554707 | 63556151 | - | – | ||
| n.a. | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; TAIR: AT1G14650.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; Swiss-Prot: sp|Q8RXF1|SF3A1_ARATH Probable splicing factor 3A subunit 1; TrEMBL-Plants: tr|V7BB20|V7BB20_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0330300 | LjG1.1_chr5 | 64744412 | 64747159 | - | – | ||
| n.a. | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; TAIR: AT1G14650.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; Swiss-Prot: sp|Q8RXF1|SF3A1_ARATH Probable splicing factor 3A subunit 1; TrEMBL-Plants: tr|V7BB20|V7BB20_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0330300 | LjG1.1_chr5 | 64744591 | 64747162 | - | – | ||
| n.a. | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; TAIR: AT1G14650.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; Swiss-Prot: sp|Q8RXF1|SF3A1_ARATH Probable splicing factor 3A subunit 1; TrEMBL-Plants: tr|V7BB20|V7BB20_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0330300 | LjG1.1_chr5 | 64744591 | 64747447 | - | – | ||
| n.a. | Small ubiquitin-related modifier; TAIR: AT1G68185.1 Ubiquitin-like superfamily protein; Swiss-Prot: sp|Q8NCF5|NF2IP_HUMAN NFATC2-interacting protein; TrEMBL-Plants: tr|I3TA04|I3TA04_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0334800 | LjG1.1_chr5 | 65196844 | 65200003 | - | – | ||
| n.a. | COP1-interacting protein 4.1; TAIR: AT4G00930.1 COP1-interacting protein 4.1; Swiss-Prot: sp|P52422|PUR3_ARATH Phosphoribosylglycinamide formyltransferase, chloroplastic; TrEMBL-Plants: tr|I1MYL1|I1MYL1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0009300_LC | LjG1.1_chr6 | 1754042 | 1756291 | - | – | ||
| n.a. | Ubiquitin-like domain-containing CTD phosphatase; TAIR: AT4G06599.1 ubiquitin family protein; Swiss-Prot: sp|Q8W3M6|UBCP_ARATH Ubiquitin-like domain-containing CTD phosphatase; TrEMBL-Plants: tr|I3SL87|I3SL87_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0062600_LC | LjG1.1_chr6 | 11458618 | 11462702 | + | – | ||
| n.a. | Ubiquitin-like domain-containing CTD phosphatase; TAIR: AT4G06599.1 ubiquitin family protein; Swiss-Prot: sp|Q8W3M6|UBCP_ARATH Ubiquitin-like domain-containing CTD phosphatase; TrEMBL-Plants: tr|I3SL87|I3SL87_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0062600_LC | LjG1.1_chr6 | 11458620 | 11462210 | + | – | ||
| n.a. | Leucine-rich repeat (LRR) family protein; TAIR: AT2G30105.1 LRR/ubiquitin-like domain protein; Swiss-Prot: sp|P0C895|Y2010_ARATH LRR repeats and ubiquitin-like domain-containing protein At2g30105; TrEMBL-Plants: tr|I3SQL0|I3SQL0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0127200 | LjG1.1_chr6 | 32896216 | 32904281 | + | – | ||
| n.a. | DNA damage-inducible protein 1; TAIR: AT3G13235.3 ubiquitin family protein; Swiss-Prot: sp|Q0U3Y6|DDI1_PHANO DNA damage-inducible protein 1; TrEMBL-Plants: tr|K7MQF1|K7MQF1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0138100 | LjG1.1_chr6 | 40242375 | 40251133 | + | – | ||
| n.a. | Small ubiquitin-related modifier; TAIR: AT5G55160.1 small ubiquitin-like modifier 2; Swiss-Prot: sp|Q9FLP6|SUMO2_ARATH Small ubiquitin-related modifier 2; TrEMBL-Plants: tr|I3S6Y1|I3S6Y1_LOTJA Small ubiquitin-related modifier; Found in the gene: LotjaGi6g1v0155300_LC | LjG1.1_chr6 | 43429862 | 43432687 | + | – | ||
| n.a. | Ubiquitin family protein; TAIR: AT5G57860.1 Ubiquitin-like superfamily protein; Swiss-Prot: sp|Q9FHQ6|UBQ9_ARATH Polyubiquitin 9; TrEMBL-Plants: tr|C6SXT9|C6SXT9_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi6g1v0201200 | LjG1.1_chr6 | 49840287 | 49844438 | + | – | ||
| n.a. | NEDD8 ultimate buster 1; TAIR: AT2G12550.1 ubiquitin-associated (UBA)/TS-N domain-containing protein; Swiss-Prot: sp|P54729|NUB1_MOUSE NEDD8 ultimate buster 1; TrEMBL-Plants: tr|I3T8K0|I3T8K0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0209700 | LjG1.1_chr6 | 50733222 | 50739360 | + | – | ||
| n.a. | Tubulin folding cofactor E; TAIR: AT1G71440.1 tubulin folding cofactor E / Pfifferling (PFI); Swiss-Prot: sp|Q8GRL7|TBCE_ARATH Tubulin-folding cofactor E; TrEMBL-Plants: tr|A0A0B2QNG8|A0A0B2QNG8_GLYSO Tubulin-specific chaperone E; Found in the gene: LotjaGi6g1v0275000 | LjG1.1_chr6 | 59175042 | 59183130 | + | – | ||
| n.a. | E3 ubiquitin-protein ligase-like protein; TAIR: AT4G12570.1 ubiquitin protein ligase 5; Swiss-Prot: sp|Q9SU29|UPL5_ARATH E3 ubiquitin-protein ligase UPL5; TrEMBL-Plants: tr|K7L3Y8|K7L3Y8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0286700 | LjG1.1_chr6 | 60405788 | 60413910 | + | – | ||
| n.a. | UBX domain-containing protein, putative; TAIR: AT4G04210.1 plant UBX domain containing protein 4; Swiss-Prot: sp|Q8RWU7|PUX4_ARATH Plant UBX domain-containing protein 4; TrEMBL-Plants: tr|A0A151T6S8|A0A151T6S8_CAJCA UBA and UBX domain-containing protein family; Found in the gene: LotjaGi6g1v0289700 | LjG1.1_chr6 | 60693824 | 60697436 | + | – | ||
| n.a. | Autophagy-related protein; TAIR: AT1G62040.1 Ubiquitin-like superfamily protein; Swiss-Prot: sp|A2YS06|ATG8C_ORYSI Autophagy-related protein 8C; TrEMBL-Plants: tr|I3S677|I3S677_LOTJA Autophagy-related protein; Found in the gene: LotjaGi6g1v0294400 | LjG1.1_chr6 | 61232023 | 61234702 | - | – | ||
| n.a. | BAG family molecular chaperone regulator; TAIR: AT5G07220.1 BCL-2-associated athanogene 3; Swiss-Prot: sp|Q9LYP4|BAG3_ARATH BAG family molecular chaperone regulator 3; TrEMBL-Plants: tr|A0A0B2PCD3|A0A0B2PCD3_GLYSO BAG family molecular chaperone regulator 2; Found in the gene: LotjaGi6g1v0312300 | LjG1.1_chr6 | 63064387 | 63066059 | - | – |