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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0567700 |
| Transcript ID | LotjaGi1g1v0567700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glutamate receptor; TAIR: AT1G42540.1 glutamate receptor 3.3; Swiss-Prot: sp|Q9C8E7|GLR33_ARATH Glutamate receptor 3.3; TrEMBL-Plants: tr|A0A1J7I836|A0A1J7I836_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0567700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:110102093..110110997) extracted from Lotus japonicus Gifu genome v1.2.
GTAAACTTTAGCAGGTATTATAAAATTAGCGGGAATGTCATTTCTGACAATATATATTATATCTTGCTCGCCGGAGTTCA GACAAACAGTCATAATCGGTGACTTGTTTTTTCCTCTCTCCGACCACCGCGGTTAGATAACTTCATTTTCATTTCTCTTC ATATCTTTGTTTCATGGTTCCTTCGGTATCATTGTTTCATTGCTCCGGAAGTAGTTGAGTTCATAGAGATGAATTTGTCT TGGGTTGTTTGCTGGGTGGTGGCGGCGGTGGTGCTCCGGCCAGTGTCTCCGTACGTGGCAGCAGCTGCAAATATCTCCAC CTCAAGACCCGCCGTTGTGAACATCGGAGCCATCTTCACCTTCGATTCCTTGATTGGGAAAGTAGCTAAAATTGCCATGG AGCAAGCCGTCAACGATGTAAACGCCAACACTAGCACCATTCTTCAAACAACCAAACTTGTTCTCCATATGCAAAATTCC GATTGCGGTGGTTTTGAGGGCATGGTTCAAGGTATGTAATCAACTATCTATTCCATTTATAGAAAAGGGTCAGAACCAGA AAGAAAAGATAGGCAAAAGGGTTGAATATTATTAACAAATCAAGTAAAATCAACAATGTATAATTAGAGTAGATAGTTTA ACTTTTTAAGACTAAGTTCACTTGTTTTGTAGAGAGGATTGAATTCATTGATGAACATGTATATGTTTTGTGTTGATTAC TGCAGCCTTGAGGTTCATGGAGACTGATGTAGTAGCTATACTAGGTCCACAATCTTCTGTAGTTGCTCACATAATATCAC ATGTTGCGAATGAGCTTCAGGTTCCTTTGTTGTCATTTGCTGCAACAGACCCTACCCTCTCGTCGCTGCAGTTCCCGTTT TTTGTGAGGACTACTCAGAGTGATTTCTATCAAATGACTGCAGTTGCTGAAGTGATTGATTATTATGGTTGGAAGGAGGT GATTGCCATATATGTAGATGATGATTATGGAAGAAATGGTGTGTCTGCATTAGATGATGCTTTATCAGCCAGGCGCTGTA GAATCTCCTACAAGGCGGGGATTCGATCAGGGCCTCAAATTGACCGGACCGAAATCACCAATTTGCTTGTGCAAGTGGCG CTGATGCCATCTCGAGTCATTGTTCTCCATGTACTTTCTGATTTGGGACTTACAATCTTCAATGTGGCGCGGTTTCTTGG GATGAAAAAGGAGGGATATGTTTGGATAGCCACAGACTGGCTCTCACCGGTTCTAGATTCTGCATCTCTTCCTTCTGACA CAACGGATTTTCTGCAGGGAGTGCTTGCTTTGCGCCAGCACACGCCTGATTCAGCTAGAAAAAAAACATTTTTCTCTAGG TGGAACAGGTTAACTGGTGGCTCTTTGGGGTTACATTCTTATGGCCTCTACGCTTATGATTCTGTTTGGCTGGTTGCGCG TGCGATTGACGCATTTTTCAGTCAGGGTGGGATTGTTTCATTTACTAATTTGACTAGTTTACCTAACGATAAGGAAGATG GTCTCAACCTTGATGCAATGAGCATTCTTGATAATGGAACACTTCTGCTGAATAACATATTGCGGAATGATTTTGCTGGA CTAACAGGTCAGGTGAAATTTGATTCAGACAGATCTCTTGTTCGTCCCGCCTATGACATCATTAATGTGGTTGGGACTGG CTTTCGTCGGATTGGTTACTGGTCCAACTATTCTGGTCTGTCAATTGTACCTCCTGAGACCTTGTATGCTAAGCCACCTA ATAGATCAAGTTCAAACCAGAACCTTCTAAGTGTCATATGGCCTGGAGAAACAACATCCAAGCCTCGAGGATGGGTCTTC CCAAGTAATGGAAAACAATTGAGAATTGGTGTTCCTATCCCTGTCAGTTTCCCTGAATTTGTGTCCCCAGTGCCGGGAAC AGATATGTTTAAAGGTTTCTCTATTGATGTATTCCAAGCAGCTGTAAACTTGTTGCCATATGCTGTTCCTTACCGCTTTG TCGCATTTGGAGATGGCCTAAAAAATCCAAGTTACACAGAACTTGTCAACCTAATCACCACTGGTGTAAGTACTGCCTGA TAATCTGATCCTCATATACTTCCCTTCATTTTGTAGCATCATTATTTTATTCAGCGGGCTAATTCATTCGTAAACCTGGA ACAGGATATTGATGGTGCTGTCGGTGACATTGCCATTGTCACAAATCGGACAAGGATTGCAGATTTTACGCAGCCATTTG CTGCATCTGGGCTTGTTGTGGTGGCCCCTTTTAAGAAGATCAATTCTGGCGGTTGGGCTTTCCTGCAGCCTTTCACTCCT TTTATGTGGATTGTGACTGCTTGTTCCTTCATTTTCGTTGGGGTCGTTGTATGGACTCTAGAACACAGGATAAATGATGA GTTCAGAGGTCCACCTAAACAACAAATTATAACCATTTTGTGGTCAGTTATTTATTTGATTATCATATTGCTGTCCTTGG CTTAATAGTTGCATACTTTCTGTTATAAACGAAATTAAGAAGTAGATTCAGCTGAGGTGTATGGCAAACATAGGCAGGAC AATTATTTTTCTTATACCATGCTTGCTGGATTTTCAATTTTTCATGCCATATGTTTGTCAATAGGATGCTGCAAGCATTT AAGAATTTACGCAGTTACCATTTACTATTTTGTGGAGCAGTAGCAGGATATGATTCATCATCACACTTGAATTGATTTAT CTGAATTGGTTCTGATCCATCTATTTTTACCGTGCCTGCAGGTTTAGCCTGTCAACTCTATTTTTTTCCCACAGTAAGTG ATACTCCAGTTACTTCTTTTGGTTGGAATGACATGATGAAGCAACTTGATTGAGTTTTTTCATTGCATTCTGCAGGAGAG AATACGATGAGTACTCTTGGTCGCATTGTGATACTTATGTGGATGTTTGTGGTTTTGATCATTAATTCCAGCTACACTGC AAGTTTAACATCCATACTCACGGTGCAGCAGTTATATTCTCCAATCGATGGAATAGATAGCTTAAAAGCTACTGATGAAC CTATAGGGTTCCAAGTGGGTTCATTTGCGGAACGTTACTTGTCTGAAGATATTGGAATATCCAAATCTAGACTTGTTCCC CTTGAAACTCAAGAAGAATATGCCAAAGCACTCGAGCTAGGGCCTAATAAAGGAGGTGTTGCTGCTATTGTTGATGAACG ACCCTATGTTGAAATCTTCTTATCAACTCAGTGCAAATTCAGGATTGTTGGTCTGGAGTTCACAAGAACCGGCTGGGGTT TTGTGAGTATCTACTGTTTAGATCAATTTGTCTATTCAACATCATTGTTCTCTTTAATGTGGCACTATGAGCATATGGCT AACTCATCCTTTAGCATTCAATGTTTTCATGAGGCTCTTTTTATTTCTACTCTGTTAGCGTGGATATTAGGATGTGTTCC ACATATGTGCAATTAGATTGTCTTTCAAATATCTTGACTTGAAAAACTGAATCAATGGTACATTCCCTTGCTTTTGTTTT CTCACTTTCCACTCCAAGTTTTAGCTTACCAATAATGGAAAATTATTAACATATGCATCTCCGTAACTCATAATCCTGAG TTTGTGTTATCCATGGTGGTATCATAAGAATAATTTTGTTTGCCATTCTAGGCATTCCCTCGGGACTCCCCTTTGGCTGT GGACTTGTCAACTGCCATTCTACAACTTTCTGAAGCTGGTGAGCTGCAGCGGATTCATGATAAGTGGATGACGCGGCGCA CCTGTAGTTTAGATAACACTGAAATTGATTCAGATCGGCTTCAACTTAAAAGCTTCTGGGGTCTTTTTGTCATTTGCGGG ATGGCTTGCTTTATTGCCCTTATCATATATTTTTTGCAGATTATGTGTCAGTTATCACATTCTGCTCATTCTGATTCTGC TGTAATTGCTAGTCCAATTCGAAGATTTCTCTCACTCATTGATGAAAAAAAAGATACATCAAGGAGTGGGACAAGAAAGA GGAGTGGAGAAGAAAGCTCACTTGAGGATCAACTGGGAAGGCAATCAAAGAGGATACAAACAGAAACAACAATTGAGTTC AATCAAACTATTAAGTAATAACCCCCTTTTTATGTCCTTGATAATATGTATATCCTTAGCCTTTGTGCTATTACTGTATA AATTCCAAATTTTAGAGCATTGCAAATGTTTGTGTTTATAAAACTATTCTTCTTAGGACGTGAATATTGAAACAAGTGGG AGTCACTGAAGATACATCTCCATGATTGCGTTTCTCTTTCCTTTTCTTTTTTCTTTTTTGAAATGTATCACAAATAACAT GTTTTATATTAGTTTTACAGTTTTTTTTAATTTGCATAAAGACTATTCCATTTCTTTTTATTTTTGATAGGCACTATTCC ATTTCTTGTAAACCCACCCTAGAAAAAGATTACTTCATTTATTGAACAGAAATTGAACTGCTGTGCATTTAGATGAAAGC GTAGCCAAAATGAGAAGTCTTGTATCTCAAGCAAGGATTAGTCTTGTCCTTGCAACAACAAAAAGCTTAGCATAGCTTGA TAAATACATGGTAGACGAATGTTTCTCTTGCATCATGTACTACTGTTCTTCTTGTGGCACCTCCTTTTTATGTTTTCTTA TTTACAATTTCAATCTCTACTATTTATTATGTGTGACTTTGGTCCCTAATAAACTTTTAAGCAAATATAGTTCCACAATT TTCAACTGTAACAGTGAAATCCCTTGTCATTTTTATTCTACTTAAAAGTTAAAGCACTCAAATTCTCATTTTCTAAATAA AATATTCACCAATTGAATTATTTAAGATATTCTTCAACTCATTTCCCATCAACTCAAATATTAAACCAGATATCACAAAT GAAATATATCATAATATTTATGAATCTGTGTTATGCTAAAACTCTTATTAGCCGCACAGAAGTTTAAACTTTGAATATCA CCCCTCAGACATTAGAAAACCATGTTTGTCTGAACATCTTTTTCTCTTTTTAACACAATGCAAAAATAAATGGCTGGCTA GTAGAGGTAACTCTTAAGTCAGAAAAGGATCCTCTATTCATAAAGTTTGCATTCCTCATCAGCTGGGTTTGTCTCGCAGA ACTCCTCCAATGGGTCTCCACTCCCTGGTGCAGCAGCTGCGCCTGGCCATTTGCTTGCAACCAAATGTGCCAAATCCACC ACTCTTTGGCTGCAATTACCAATATTGTAACTATCAATGTTCAATGACATGATCTATTACAAGGATATAAAAATTCATTT TCTCTGCTATGTGCAATGACTAACTGAATTCATTTTTTACAACTGAATTTCACATTATCCTACCAAAATCACTTTTTTCA TAAATGTAATTAAAACATAAATAACTTCACTTTCAACATACTTTTACTATAATCAATTTTGCCAAATTCAATTTTATCCA AAATCAATTGTGACAATGCTAATCCAAACACACGCTTATAGTATATTGACAGGAACCTCACCTGTAACCCCATTCATTGT CATACCAAGCAACCACTTTGACCATATCATCTCCCATGACCATGGTCAATGAGGAGTCAATAGTAGAAGAAACATCAGTG CACCTGAAGTCCACAGACACCAGTGGAACATCACACACATCCAACACACCTTTCAGTGGCCCTTCAGCTGCCTTTCTGAA TGCTGCATTGACATCTTCAGCTGAGATACCCTTCTTCTCAACATTCACCACAAGGTCAACCACCGAAACATTGGGTGTCG GCACGCGGAGGGCAATCCCATTGAGCTTTCCCTTGAGCTGTGGCAGCACCAGAGACACGGCCTTGGCCGCTCCGGTGCTG GTGGGGACAATGTTCAGAGCTGCAGCCCTAGCTCTTCTCAAGTCCCTGTGAGAAGCATCCAAAAGCCTCTGCACAAGAAC AATTCATACCATAACTTCATATACTGATATCTTGATATTATGGGATGACAATATATCTGATATATATAATATCCAATAAG ATCACAACTGCACCAATATCTCTGTAATGTCACAAAATCTCATAATATCTGCAACAGTATCTCAATAATGTCATAAAATC TCATTAATATCTCATTATTTTATCCATTTTGCAATTGGAAAATTAAATAGATGACTTGGTAAACACTTTTTCAGATATTT CATATTTGAAATAACATAAGCAGTAAAACTATGGTTAATTCATAAGTTTCCAATGTATGATCTTGTACCTGATCTCCTGT GTAGGAATGTGTGGTTGTCATGGTTCCCTTCACAATTCCTGGAAATACAGACCAAAGGGTAGTGACTTCAAGTCTGGAAT GTGACTCTTAAATATTAACTGCCATTATGAATATGATGAGTGTTTGCTTACCAAACTCTTCATCCAGGATCTTCACGAAG GGAGCAAGACAGTTTGTGGTGCAAGAAGCATTGCTGTAAATTAAAGAAACAAAAGAAAGAATAAAGTCAATCACTCAATA CATGTATATTTCAGGGATGGAAAATGAACAATCAACACAGAACACAATGCTGCATTGACATTTTCAGCTGTTAATAACCT TTCTTTTCAATCTCAACATTGATATCTTGTTTGAAAAAGAAAAAAACCAAACAAAGCACAGATTTAGTGGTCACGGACCT TATAATGTCGGCGACATTATGACCGTAGTCCCCTTCATTTACTCCAACAACATAAGTTGGAATATCAGCACCCTTTGCAG GAGCAGTGATGATAACTTTCTTGGCACCTGCTTGGATGTGTTTTCCAGCACCAGGGCCATCCACAAACACTCCTGTTCCC TGAACAAAAATTCATTCAATCTTTTCAAAAGCTCTGAAGTTATAAACAATACCATGAAATTTTCACTGGATTGGATATCA GGGTATACGAGGAAGGTTGTGTTAGGCCTGCCGCAGCTAACGTATAACTAGCTGTCAATTATAATATGAATCAAACACGC AGGCCTCACTTAGTTGGATAAGGCTTTTGTTGTTGTTCTTGGATATCAGGACATATAAAGTTATGCAAAAAAAAAAAAAG ACTTACCAAATCCATATATTTCTTCAATATTGGTAGCAAGTGCTTCTTGTATTACTTTCATTCTCTTCTCAGGACTTAGG TGAATGGCATATGAATAAAATGAAGTAGTGGGGACTTACCTCAATAACAATATCAATTCCAAGCTCAGCCCAAGGAAGCT TAAGAGGGTCCCTGTTTGCGACAACCTTGATGGGCTTACCATCAACTGTAATGGTGTTCTCATTTAGTATTTTCACATCT GCTTTAAAAGTTCCCAGCATAGAATCATATTTCAACAGATGCGAAGCCTGGATATGTGAAGAAACAAGTCATTAACTAGC ATTCGCATTATTCAGTGAAACTAATGATAGCACGTTTGGATCAACTTTTTTCTCAGAATCAATTCTGACACCCAGAAGCT ACTCATAGCAGCAGCTTCTCACCAGAATTAATTCAGGATATAGAATCAATTGTAGAAAGATTTCCAAAAAATGCCATGAA TCTGTACTAATAACAAAACAAACTCAGCCAAGCTAATTGAAGGGCAATGCCATTTAAGAAACTTACATTCTTCACACCAC CACTGTCATTGACAACAATCACCTCAAGGGGTGAGTCCTTTCGGCCGTGCCAGCAGCGCAGGAAATTTCTACCAATACGT CCAAAACCATTGATCGCTACCTTCAACTTAGCCACAGTTTCTCCCCTCACAGCAGTTGAACCAATTGCCTGATGTTAACT CACAAATTACAAATTACAAATTATGTACAAGCAAACCAAAAAATGATTACATTGAGAAACTGAACCTATTTAGCTCCATC TATCAAAGATGTCAATTATTATGTGTTATAATATTGATATTCACTTCATGACTGATTATATTATATATATACAGCTTTAC AAGGAACCATTAAACTACTGCATTTATCATGGTTTGCAGAGTATCAAACATGTCATAATATATTAATTAAGTTGATTGAA AGAACACAAAATAAATAAGAAATTAACCTTGGGAGTGAGTTGGGCAGCTACAACATCAAAAAAGGAAGACTCTCTAGCAT TATTGGCATAGGTGACGCATGAACTTGATCTTAGGCCAGAGAATTCTGTCACCTCAAGCCTCTGCAAAAGCAAAATTAAG TGAAGTAAGGAAATGATCACTTTTAAGCTGATGAAACTAGTAGTATATATGGATCAACTTCTCGTTCATCAGAATCAATT CTGAAACTAGAAGCTAATAGGAGTTCCTACCTAGAATTGATTCAAGCTACAATGTCAATTGTAAAATGCTTTTCAAATAT TATTATAGAGAAGATGAGTGGAACCTTTGAGGAGCATTGGGCTGGGAAAGAGTGAGAGGCCTTGGATGAAAACTTGGTGT TTGTGGGGATCCTTGTAGAAGCTAGAGCTGCATGGGTGGTGGCCATGGCTCTGCAACAAAGCTAAGCTTTACAAGTACAA TACAACAACAACTTCTTGTGAGTATGTATATATTATATTTGCAGGATCAAGTTGTCCCTGGCTTCTCCTCCTCTTGTTAT ATTCTTTTCAGATTTTTCTAAAGCTGATCGTGAAAAAAATAATGAGAAAAGGAAATTATGGTTGCTGGTGCATAATGGAA ATGAGTGGTGAATATGTTGTAGAAAATCAACAAGATAAGATAATGTTTGGATATCAGTGTTTTTCAACAGTTGGACTTCA TATTTTCAGCCACATAACCGTTTCGTAATTTCCTTTGTTCATGCTATATGTTTATGGTTTTCATCCTCAAGTTTGAATGA TTATGAGCCTCTTTGGATACAGATTTTATTGAAGTTTATCTACGGGAAAAAAAACATTAGGTAACCTTCAATAAGTACAC TTCAATTTGCATCCAAATAATTGTA
CDS sequence (LotjaGi1g1v0567700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATTTGTCTTGGGTTGTTTGCTGGGTGGTGGCGGCGGTGGTGCTCCGGCCAGTGTCTCCGTACGTGGCAGCAGCTGC AAATATCTCCACCTCAAGACCCGCCGTTGTGAACATCGGAGCCATCTTCACCTTCGATTCCTTGATTGGGAAAGTAGCTA AAATTGCCATGGAGCAAGCCGTCAACGATGTAAACGCCAACACTAGCACCATTCTTCAAACAACCAAACTTGTTCTCCAT ATGCAAAATTCCGATTGCGGTGGTTTTGAGGGCATGGTTCAAGCCTTGAGGTTCATGGAGACTGATGTAGTAGCTATACT AGGTCCACAATCTTCTGTAGTTGCTCACATAATATCACATGTTGCGAATGAGCTTCAGGTTCCTTTGTTGTCATTTGCTG CAACAGACCCTACCCTCTCGTCGCTGCAGTTCCCGTTTTTTGTGAGGACTACTCAGAGTGATTTCTATCAAATGACTGCA GTTGCTGAAGTGATTGATTATTATGGTTGGAAGGAGGTGATTGCCATATATGTAGATGATGATTATGGAAGAAATGGTGT GTCTGCATTAGATGATGCTTTATCAGCCAGGCGCTGTAGAATCTCCTACAAGGCGGGGATTCGATCAGGGCCTCAAATTG ACCGGACCGAAATCACCAATTTGCTTGTGCAAGTGGCGCTGATGCCATCTCGAGTCATTGTTCTCCATGTACTTTCTGAT TTGGGACTTACAATCTTCAATGTGGCGCGGTTTCTTGGGATGAAAAAGGAGGGATATGTTTGGATAGCCACAGACTGGCT CTCACCGGTTCTAGATTCTGCATCTCTTCCTTCTGACACAACGGATTTTCTGCAGGGAGTGCTTGCTTTGCGCCAGCACA CGCCTGATTCAGCTAGAAAAAAAACATTTTTCTCTAGGTGGAACAGGTTAACTGGTGGCTCTTTGGGGTTACATTCTTAT GGCCTCTACGCTTATGATTCTGTTTGGCTGGTTGCGCGTGCGATTGACGCATTTTTCAGTCAGGGTGGGATTGTTTCATT TACTAATTTGACTAGTTTACCTAACGATAAGGAAGATGGTCTCAACCTTGATGCAATGAGCATTCTTGATAATGGAACAC TTCTGCTGAATAACATATTGCGGAATGATTTTGCTGGACTAACAGGTCAGGTGAAATTTGATTCAGACAGATCTCTTGTT CGTCCCGCCTATGACATCATTAATGTGGTTGGGACTGGCTTTCGTCGGATTGGTTACTGGTCCAACTATTCTGGTCTGTC AATTGTACCTCCTGAGACCTTGTATGCTAAGCCACCTAATAGATCAAGTTCAAACCAGAACCTTCTAAGTGTCATATGGC CTGGAGAAACAACATCCAAGCCTCGAGGATGGGTCTTCCCAAGTAATGGAAAACAATTGAGAATTGGTGTTCCTATCCCT GTCAGTTTCCCTGAATTTGTGTCCCCAGTGCCGGGAACAGATATGTTTAAAGGTTTCTCTATTGATGTATTCCAAGCAGC TGTAAACTTGTTGCCATATGCTGTTCCTTACCGCTTTGTCGCATTTGGAGATGGCCTAAAAAATCCAAGTTACACAGAAC TTGTCAACCTAATCACCACTGGTGATATTGATGGTGCTGTCGGTGACATTGCCATTGTCACAAATCGGACAAGGATTGCA GATTTTACGCAGCCATTTGCTGCATCTGGGCTTGTTGTGGTGGCCCCTTTTAAGAAGATCAATTCTGGCGGTTGGGCTTT CCTGCAGCCTTTCACTCCTTTTATGTGGATTGTGACTGCTTGTTCCTTCATTTTCGTTGGGGTCGTTGTATGGACTCTAG AACACAGGATAAATGATGAGTTCAGAGGTCCACCTAAACAACAAATTATAACCATTTTGTGGTTTAGCCTGTCAACTCTA TTTTTTTCCCACAGAGAGAATACGATGAGTACTCTTGGTCGCATTGTGATACTTATGTGGATGTTTGTGGTTTTGATCAT TAATTCCAGCTACACTGCAAGTTTAACATCCATACTCACGGTGCAGCAGTTATATTCTCCAATCGATGGAATAGATAGCT TAAAAGCTACTGATGAACCTATAGGGTTCCAAGTGGGTTCATTTGCGGAACGTTACTTGTCTGAAGATATTGGAATATCC AAATCTAGACTTGTTCCCCTTGAAACTCAAGAAGAATATGCCAAAGCACTCGAGCTAGGGCCTAATAAAGGAGGTGTTGC TGCTATTGTTGATGAACGACCCTATGTTGAAATCTTCTTATCAACTCAGTGCAAATTCAGGATTGTTGGTCTGGAGTTCA CAAGAACCGGCTGGGGTTTTGCATTCCCTCGGGACTCCCCTTTGGCTGTGGACTTGTCAACTGCCATTCTACAACTTTCT GAAGCTGGTGAGCTGCAGCGGATTCATGATAAGTGGATGACGCGGCGCACCTGTAGTTTAGATAACACTGAAATTGATTC AGATCGGCTTCAACTTAAAAGCTTCTGGGGTCTTTTTGTCATTTGCGGGATGGCTTGCTTTATTGCCCTTATCATATATT TTTTGCAGATTATGTGTCAGTTATCACATTCTGCTCATTCTGATTCTGCTGTAATTGCTAGTCCAATTCGAAGATTTCTC TCACTCATTGATGAAAAAAAAGATACATCAAGGAGTGGGACAAGAAAGAGGAGTGGAGAAGAAAGCTCACTTGAGGATCA ACTGGGAAGGCAATCAAAGAGGATACAAACAGAAACAACAATTGAGTTCAATCAAACTATTAAGTAA
Protein sequence (LotjaGi1g1v0567700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNLSWVVCWVVAAVVLRPVSPYVAAAANISTSRPAVVNIGAIFTFDSLIGKVAKIAMEQAVNDVNANTSTILQTTKLVLH MQNSDCGGFEGMVQALRFMETDVVAILGPQSSVVAHIISHVANELQVPLLSFAATDPTLSSLQFPFFVRTTQSDFYQMTA VAEVIDYYGWKEVIAIYVDDDYGRNGVSALDDALSARRCRISYKAGIRSGPQIDRTEITNLLVQVALMPSRVIVLHVLSD LGLTIFNVARFLGMKKEGYVWIATDWLSPVLDSASLPSDTTDFLQGVLALRQHTPDSARKKTFFSRWNRLTGGSLGLHSY GLYAYDSVWLVARAIDAFFSQGGIVSFTNLTSLPNDKEDGLNLDAMSILDNGTLLLNNILRNDFAGLTGQVKFDSDRSLV RPAYDIINVVGTGFRRIGYWSNYSGLSIVPPETLYAKPPNRSSSNQNLLSVIWPGETTSKPRGWVFPSNGKQLRIGVPIP VSFPEFVSPVPGTDMFKGFSIDVFQAAVNLLPYAVPYRFVAFGDGLKNPSYTELVNLITTGDIDGAVGDIAIVTNRTRIA DFTQPFAASGLVVVAPFKKINSGGWAFLQPFTPFMWIVTACSFIFVGVVVWTLEHRINDEFRGPPKQQIITILWFSLSTL FFSHRENTMSTLGRIVILMWMFVVLIINSSYTASLTSILTVQQLYSPIDGIDSLKATDEPIGFQVGSFAERYLSEDIGIS KSRLVPLETQEEYAKALELGPNKGGVAAIVDERPYVEIFLSTQCKFRIVGLEFTRTGWGFAFPRDSPLAVDLSTAILQLS EAGELQRIHDKWMTRRTCSLDNTEIDSDRLQLKSFWGLFVICGMACFIALIIYFLQIMCQLSHSAHSDSAVIASPIRRFL SLIDEKKDTSRSGTRKRSGEESSLEDQLGRQSKRIQTETTIEFNQTIK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | - | – | |
| SignalP_EUK | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 4 | 4 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 26 | 26 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 25 | 25 | - | – | |
| PIRSF | 2 | 927 | 926 | 0.0 | ||
| Phobius | 5 | 16 | 12 | - | – | |
| Phobius | 17 | 25 | 9 | - | – | |
| PANTHER | 26 | 904 | 879 | 0.0 | – | |
| PANTHER | 26 | 904 | 879 | 0.0 | – | |
| Phobius | 26 | 593 | 568 | - | – | |
| SUPERFAMILY | 32 | 465 | 434 | 2.62E-83 | ||
| CDD | 38 | 427 | 390 | 1.97562E-126 | – | |
| PRINTS | 50 | 66 | 17 | 5.7E-5 | – | |
| Pfam | 54 | 412 | 359 | 1.0E-80 | ||
| Gene3D | 55 | 402 | 348 | 2.9E-88 | – | |
| PRINTS | 106 | 132 | 27 | 2.9E-12 | ||
| PRINTS | 111 | 139 | 29 | 5.7E-5 | – | |
| PRINTS | 138 | 157 | 20 | 2.9E-12 | ||
| Gene3D | 153 | 426 | 274 | 2.9E-88 | – | |
| PRINTS | 157 | 173 | 17 | 2.9E-12 | ||
| PRINTS | 173 | 190 | 18 | 2.9E-12 | ||
| PRINTS | 324 | 336 | 13 | 5.7E-5 | – | |
| SUPERFAMILY | 448 | 814 | 367 | 8.25E-47 | – | |
| CDD | 471 | 812 | 342 | 2.49076E-82 | – | |
| SMART | 474 | 815 | 342 | 5.4E-55 | ||
| Gene3D | 494 | 828 | 335 | 2.6E-79 | – | |
| Pfam | 495 | 813 | 319 | 2.4E-17 | ||
| Gene3D | 570 | 778 | 209 | 2.6E-79 | – | |
| Gene3D | 580 | 855 | 276 | 2.6E-79 | – | |
| TMHMM | 591 | 613 | 23 | - | – | |
| Phobius | 594 | 613 | 20 | - | – | |
| Phobius | 614 | 624 | 11 | - | – | |
| Phobius | 625 | 643 | 19 | - | – | |
| Phobius | 644 | 654 | 11 | - | – | |
| TMHMM | 652 | 674 | 23 | - | – | |
| Phobius | 655 | 679 | 25 | - | – | |
| Phobius | 680 | 834 | 155 | - | – | |
| Pfam | 814 | 846 | 33 | 8.6E-37 | ||
| TMHMM | 835 | 857 | 23 | - | – | |
| Phobius | 835 | 855 | 21 | - | – | |
| Phobius | 856 | 928 | 73 | - | – | |
| MobiDBLite | 890 | 919 | 30 | - | – | |
| MobiDBLite | 890 | 912 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | G protein-coupled receptor activity | Combining with an extracellular signal and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex. | ||
| Biological process | G protein-coupled receptor signaling pathway | A series of molecular signals that proceeds with an activated receptor promoting the exchange of GDP for GTP on the alpha-subunit of an associated heterotrimeric G-protein complex. The GTP-bound activated alpha-G-protein then dissociates from the beta- and gamma-subunits to further transmit the signal within the cell. The pathway begins with receptor-ligand interaction, or for basal GPCR signaling the pathway begins with the receptor activating its G protein in the absence of an agonist, and ends with regulation of a downstream cellular process, e.g. transcription. The pathway can start from the plasma membrane, Golgi or nuclear membrane (PMID:24568158 and PMID:16902576). | ||
| Molecular function | Ligand-gated ion channel activity | Enables the transmembrane transfer of an ion by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi1g1v0567700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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