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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002319
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We have found 20 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.096s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0316529.1
n.a. PREDICTED: phenylalanyl-tRNA synthetase, chloroplastic/mitochondrial-like [Glycine max] gi|356569020|ref|XP_003552705.1| chr0 165332214 165334273 -
2 domain predictions
4 GO terms
Lj0g3v0326999.1
n.a. PREDICTED: phenylalanyl-tRNA synthetase, chloroplastic/mitochondrial-like [Glycine max] gi|356569020|ref|XP_003552705.1| chr0 170936878 170940076 -
2 domain predictions
4 GO terms
Lj1g3v0054690.1
n.a. PREDICTED: probable phenylalanine--tRNA ligase alpha subunit-like [Cicer arietinum] gi|502080886|ref|XP_004486713.1| chr1 641803 649767 -
2 domain predictions
4 GO terms
Lj3g3v3348650.1
n.a. PREDICTED: probable phenylalanine--tRNA ligase alpha subunit-like [Cicer arietinum] gi|502080886|ref|XP_004486713.1| chr3 41139554 41148251 +
2 domain predictions
4 GO terms
LotjaGi1g1v0247200_LC.1
n.a. Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp|Q94K73|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A1J7HX04|A0A1J7HX04_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0247200_LC LjG1.1_chr1 59403507 59404711 -
2 domain predictions
4 GO terms
LotjaGi2g1v0456000.1
n.a. Phenylalanine--tRNA ligase alpha subunit; TAIR: AT4G39280.1 phenylalanyl-tRNA synthetase, putative / phenylalanine-tRNA ligase; Swiss-Prot: sp|Q9T034|SYFA_ARATH Phenylalanine--tRNA ligase alpha subunit, cytoplasmic; TrEMBL-Plants: tr|A0A151TGA0|A0A151TGA0_CAJCA Putative phenylalanyl-tRNA synthetase alpha chain; Found in the gene: LotjaGi2g1v0456000 LjG1.1_chr2 94904416 94910155 +
2 domain predictions
4 GO terms
LotjaGi2g1v0456000.3
n.a. Phenylalanine--tRNA ligase alpha subunit; TAIR: AT4G39280.1 phenylalanyl-tRNA synthetase, putative / phenylalanine-tRNA ligase; Swiss-Prot: sp|Q9T034|SYFA_ARATH Phenylalanine--tRNA ligase alpha subunit, cytoplasmic; TrEMBL-Plants: tr|A0A151TGA0|A0A151TGA0_CAJCA Putative phenylalanyl-tRNA synthetase alpha chain; Found in the gene: LotjaGi2g1v0456000 LjG1.1_chr2 94904683 94909574 +
2 domain predictions
4 GO terms
LotjaGi2g1v0456000.4
n.a. Phenylalanine--tRNA ligase alpha subunit; TAIR: AT4G39280.1 phenylalanyl-tRNA synthetase, putative / phenylalanine-tRNA ligase; Swiss-Prot: sp|Q9T034|SYFA_ARATH Phenylalanine--tRNA ligase alpha subunit, cytoplasmic; TrEMBL-Plants: tr|K7LSZ2|K7LSZ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0456000 LjG1.1_chr2 94907371 94909574 +
2 domain predictions
4 GO terms
LotjaGi3g1v0508200.1
n.a. Phenylalanine--tRNA ligase alpha subunit; TAIR: AT4G39280.1 phenylalanyl-tRNA synthetase, putative / phenylalanine-tRNA ligase; Swiss-Prot: sp|Q9T034|SYFA_ARATH Phenylalanine--tRNA ligase alpha subunit, cytoplasmic; TrEMBL-Plants: tr|A0A151TGA0|A0A151TGA0_CAJCA Putative phenylalanyl-tRNA synthetase alpha chain; Found in the gene: LotjaGi3g1v0508200 LjG1.1_chr3 92504217 92515118 +
2 domain predictions
4 GO terms
LotjaGi3g1v0508200.2
n.a. Phenylalanine--tRNA ligase alpha subunit; TAIR: AT4G39280.1 phenylalanyl-tRNA synthetase, putative / phenylalanine-tRNA ligase; Swiss-Prot: sp|Q9T034|SYFA_ARATH Phenylalanine--tRNA ligase alpha subunit, cytoplasmic; TrEMBL-Plants: tr|A0A151TGA0|A0A151TGA0_CAJCA Putative phenylalanyl-tRNA synthetase alpha chain; Found in the gene: LotjaGi3g1v0508200 LjG1.1_chr3 92504517 92510389 +
2 domain predictions
4 GO terms
LotjaGi5g1v0089800.1
n.a. Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp|Q94K73|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|K7MVE7|K7MVE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0089800 LjG1.1_chr5 15620596 15628216 -
2 domain predictions
4 GO terms
LotjaGi5g1v0089800.2
n.a. Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp|Q94K73|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A1J7HX04|A0A1J7HX04_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0089800 LjG1.1_chr5 15620912 15627180 -
2 domain predictions
4 GO terms
LotjaGi5g1v0089800.3
n.a. Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp|Q94K73|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|K7MVE7|K7MVE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0089800 LjG1.1_chr5 15620912 15627442 -
2 domain predictions
4 GO terms
LotjaGi5g1v0089800.4
n.a. Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp|Q94K73|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|K7MVE7|K7MVE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0089800 LjG1.1_chr5 15620912 15628216 -
2 domain predictions
4 GO terms
LotjaGi6g1v0336000.1
n.a. Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp|Q94K73|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|K7MVE7|K7MVE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0336000 LjG1.1_chr6 65048122 65056897 +
2 domain predictions
4 GO terms
LotjaGi6g1v0336000.2
n.a. Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp|Q94K73|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|K7MVE7|K7MVE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0336000 LjG1.1_chr6 65048955 65056122 +
2 domain predictions
4 GO terms
LotjaGi6g1v0336000.3
n.a. Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp|Q94K73|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|K7MVE7|K7MVE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0336000 LjG1.1_chr6 65048955 65056122 +
2 domain predictions
4 GO terms
LotjaGi6g1v0336000.4
n.a. Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp|Q94K73|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A1J7HX04|A0A1J7HX04_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0336000 LjG1.1_chr6 65048973 65056122 +
2 domain predictions
4 GO terms
LotjaGi6g1v0336000.5
n.a. Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp|Q94K73|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|K7MVE7|K7MVE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0336000 LjG1.1_chr6 65049729 65056122 +
2 domain predictions
4 GO terms
LotjaGi6g1v0336000.6
n.a. Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp|Q94K73|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A1J7HX04|A0A1J7HX04_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0336000 LjG1.1_chr6 65049991 65056122 +
2 domain predictions
4 GO terms