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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002344
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.477s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0282859.1
n.a. PREDICTED: la-related protein 7-like [Cicer arietinum] gi|502078710|ref|XP_004486031.1| chr0 146608676 146609224 -
2 domain predictions
4 GO terms
Lj1g3v2038800.1
n.a. PREDICTED: la-related protein 7-like [Cicer arietinum] gi|502124330|ref|XP_004498482.1| chr1 24129181 24133288 -
2 domain predictions
4 GO terms
Lj1g3v2050880.1
n.a. PREDICTED: lupus La protein homolog A-like [Glycine max] gi|356515577|ref|XP_003526475.1| chr1 24167237 24170929 +
2 domain predictions
4 GO terms
Lj1g3v5062760.1
n.a. PREDICTED: la-related protein 7-like [Cucumis sativus] gi|449492647|ref|XP_004159060.1| chr1 62259172 62266781 -
2 domain predictions
4 GO terms
Lj3g3v0850580.1
n.a. La-related protein [Medicago truncatula] gi|357447339|ref|XP_003593945.1| chr3 10667843 10668220 +
2 domain predictions
4 GO terms
Lj6g3v1934050.1
n.a. PREDICTED: la-related protein 7-like [Cicer arietinum] gi|502078710|ref|XP_004486031.1| chr6 22002935 22007827 -
2 domain predictions
4 GO terms
LotjaGi1g1v0400000.1
n.a. La protein like; TAIR: AT4G32720.2 La protein 1; Swiss-Prot: sp|Q93ZV7|LA1_ARATH La protein 1; TrEMBL-Plants: tr|I1K995|I1K995_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0400000 LjG1.1_chr1 88736591 88740914 +
2 domain predictions
4 GO terms
LotjaGi1g1v0800900.1
n.a. La; TAIR: AT2G43970.1 RNA-binding protein; Swiss-Prot: sp|O80567|LRP6B_ARATH La-related protein 6B; TrEMBL-Plants: tr|I1NCU5|I1NCU5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0800900 LjG1.1_chr1 137140905 137149615 -
2 domain predictions
4 GO terms
LotjaGi4g1v0071000.1
n.a. La; TAIR: AT3G19090.1 RNA-binding protein; Swiss-Prot: sp|Q9LHL3|LRP6C_ARATH La-related protein 6C; TrEMBL-Plants: tr|G7JMI2|G7JMI2_MEDTR LA-related protein 6 LA RNA-binding domain protein; Found in the gene: LotjaGi4g1v0071000 LjG1.1_chr4 9000885 9004624 +
2 domain predictions
4 GO terms
LotjaGi6g1v0308500.4
n.a. La; TAIR: AT5G46250.1 RNA-binding protein; Swiss-Prot: sp|Q94A38|LRP6A_ARATH La-related protein 6A; TrEMBL-Plants: tr|A0A151R8A3|A0A151R8A3_CAJCA La-related protein 7; Found in the gene: LotjaGi6g1v0308500 LjG1.1_chr6 62577041 62582062 -
2 domain predictions
4 GO terms