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| Field | Value |
|---|---|
| Gene ID | Lj2g3v0719120 |
| Transcript ID | Lj2g3v0719120.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Zinc finger protein-like protein [Medicago truncatula] gi|357500299|ref|XP_003620438.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 169 | 167 | 0 | – | |
| PANTHER | 3 | 169 | 167 | 0 | – | |
| Gene3D | 3 | 180 | 178 | 1.50E-63 | – | |
| Pfam | 4 | 138 | 135 | 1.80E-09 | ||
| CDD | 7 | 136 | 130 | 6.24E-17 | – | |
| PANTHER | 198 | 590 | 393 | 0 | – | |
| PANTHER | 198 | 590 | 393 | 0 | – | |
| Gene3D | 338 | 551 | 214 | 5.30E-40 | – | |
| Pfam | 340 | 503 | 164 | 1.60E-06 | ||
| CDD | 342 | 502 | 161 | 2.85E-27 | – | |
| PANTHER | 676 | 927 | 252 | 0 | – | |
| PANTHER | 676 | 927 | 252 | 0 | – | |
| SUPERFAMILY | 678 | 743 | 66 | 7.45E-17 | – | |
| ProSiteProfiles | 679 | 748 | 70 | 26.262 | ||
| Pfam | 686 | 761 | 76 | 9.10E-21 | ||
| ProSiteProfiles | 751 | 814 | 64 | 29.831 | ||
| SUPERFAMILY | 752 | 808 | 57 | 1.44E-15 | – | |
| SUPERFAMILY | 812 | 868 | 57 | 1.32E-09 | – | |
| Gene3D | 812 | 858 | 47 | 1.30E-11 | ||
| Pfam | 814 | 856 | 43 | 1.10E-08 | ||
| ProSiteProfiles | 815 | 857 | 43 | 11.604 | ||
| SMART | 815 | 856 | 42 | 5.50E-07 | ||
| CDD | 815 | 860 | 46 | 1.68E-05 | – | |
| Pfam | 861 | 919 | 59 | 3.10E-24 | – | |
| Gene3D | 886 | 925 | 40 | 7.50E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of Lj2g3v0719120.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v0719120.1, powered by CORGI.
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