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| Field | Value |
|---|---|
| Gene ID | Lj4g3v3099540 |
| Transcript ID | Lj4g3v3099540.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Zinc finger protein-like protein [Medicago truncatula] gi|357500299|ref|XP_003620438.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 24 | 462 | 439 | 0 | – | |
| PANTHER | 24 | 462 | 439 | 0 | – | |
| Gene3D | 34 | 219 | 186 | 1.60E-43 | – | |
| CDD | 43 | 169 | 127 | 1.22E-33 | – | |
| Pfam | 45 | 171 | 127 | 6.60E-13 | ||
| Gene3D | 295 | 513 | 219 | 4.30E-62 | – | |
| Pfam | 297 | 431 | 135 | 1.30E-06 | ||
| CDD | 300 | 429 | 130 | 4.87E-16 | – | |
| PANTHER | 491 | 896 | 406 | 0 | – | |
| PANTHER | 491 | 896 | 406 | 0 | – | |
| Gene3D | 644 | 739 | 96 | 3.40E-40 | – | |
| Pfam | 646 | 809 | 164 | 3.00E-08 | ||
| CDD | 653 | 808 | 156 | 2.12E-27 | – | |
| Gene3D | 772 | 857 | 86 | 3.40E-40 | – | |
| PANTHER | 982 | 1234 | 253 | 0 | – | |
| PANTHER | 982 | 1234 | 253 | 0 | – | |
| ProSiteProfiles | 985 | 1054 | 70 | 25.516 | ||
| SUPERFAMILY | 987 | 1048 | 62 | 3.66E-16 | – | |
| Pfam | 992 | 1067 | 76 | 1.70E-20 | ||
| ProSiteProfiles | 1057 | 1120 | 64 | 29.396 | ||
| SUPERFAMILY | 1058 | 1114 | 57 | 2.22E-15 | – | |
| SUPERFAMILY | 1118 | 1173 | 56 | 1.96E-08 | – | |
| Gene3D | 1119 | 1166 | 48 | 1.20E-10 | ||
| Pfam | 1120 | 1162 | 43 | 1.60E-07 | ||
| SMART | 1121 | 1162 | 42 | 9.90E-06 | ||
| ProSiteProfiles | 1121 | 1163 | 43 | 11.427 | ||
| CDD | 1121 | 1166 | 46 | 1.11E-05 | – | |
| Pfam | 1167 | 1225 | 59 | 3.10E-23 | – | |
| Gene3D | 1191 | 1229 | 39 | 4.70E-17 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of Lj4g3v3099540.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v3099540.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.