Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR040125
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 19 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.644s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0363700.1
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|I1K897|I1K897_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0363700 LjG1.1_chr1 83931051 83937993 +
2 domain predictions
2 GO terms
LotjaGi1g1v0363700.2
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|A0A151TTQ0|A0A151TTQ0_CAJCA Squalene monooxygenase; Found in the gene: LotjaGi1g1v0363700 LjG1.1_chr1 83932885 83936266 +
2 domain predictions
2 GO terms
LotjaGi4g1v0043300.1
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|I1KL88|I1KL88_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0043300 LjG1.1_chr4 5117536 5142936 +
2 domain predictions
2 GO terms
LotjaGi4g1v0043300.2
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|I1KL88|I1KL88_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0043300 LjG1.1_chr4 5119215 5123029 +
2 domain predictions
2 GO terms
LotjaGi4g1v0043300.3
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|I1KL88|I1KL88_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0043300 LjG1.1_chr4 5119254 5123029 +
2 domain predictions
2 GO terms
LotjaGi4g1v0043300.4
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|I1KL88|I1KL88_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0043300 LjG1.1_chr4 5119257 5122945 +
2 domain predictions
2 GO terms
LotjaGi4g1v0043300.5
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|I1KL88|I1KL88_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0043300 LjG1.1_chr4 5119257 5122978 +
2 domain predictions
2 GO terms
LotjaGi4g1v0043300.6
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|A0A0B2SMP9|A0A0B2SMP9_GLYSO Squalene monooxygenase; Found in the gene: LotjaGi4g1v0043300 LjG1.1_chr4 5119941 5122945 +
2 domain predictions
2 GO terms
LotjaGi4g1v0043300.7
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|A0A0B2SMP9|A0A0B2SMP9_GLYSO Squalene monooxygenase; Found in the gene: LotjaGi4g1v0043300 LjG1.1_chr4 5119999 5122945 +
2 domain predictions
2 GO terms
LotjaGi4g1v0043300.8
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|A0A075DZG2|A0A075DZG2_ASTME Squalene epoxidase; Found in the gene: LotjaGi4g1v0043300 LjG1.1_chr4 5135530 5142722 +
2 domain predictions
2 GO terms
LotjaGi4g1v0043600.1
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|I1KL88|I1KL88_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0043600 LjG1.1_chr4 5164794 5169582 +
2 domain predictions
2 GO terms
LotjaGi5g1v0037500.1
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|A0A0B2RV99|A0A0B2RV99_GLYSO Squalene monooxygenase; Found in the gene: LotjaGi5g1v0037500 LjG1.1_chr5 6204062 6209194 +
2 domain predictions
2 GO terms
LotjaGi5g1v0037500.2
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|A0A0B2QBL8|A0A0B2QBL8_GLYSO Squalene monooxygenase; Found in the gene: LotjaGi5g1v0037500 LjG1.1_chr5 6205244 6207980 +
2 domain predictions
2 GO terms
LotjaGi6g1v0181200.1
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|K7MRG5|K7MRG5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0181200 LjG1.1_chr6 47323437 47328010 -
2 domain predictions
2 GO terms
LotjaGi6g1v0345600.1
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|A0A075DZG2|A0A075DZG2_ASTME Squalene epoxidase; Found in the gene: LotjaGi6g1v0345600 LjG1.1_chr6 65825073 65831462 -
2 domain predictions
2 GO terms
LotjaGi6g1v0345600.2
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|A0A075DZG2|A0A075DZG2_ASTME Squalene epoxidase; Found in the gene: LotjaGi6g1v0345600 LjG1.1_chr6 65825478 65831462 -
2 domain predictions
2 GO terms
LotjaGi6g1v0345600.3
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|I1M2I5|I1M2I5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0345600 LjG1.1_chr6 65825505 65828667 -
2 domain predictions
2 GO terms
LotjaGi6g1v0345600.4
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|I1M2I5|I1M2I5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0345600 LjG1.1_chr6 65825505 65828978 -
2 domain predictions
2 GO terms
LotjaGi6g1v0345900.1
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|A0A075DZG2|A0A075DZG2_ASTME Squalene epoxidase; Found in the gene: LotjaGi6g1v0345900 LjG1.1_chr6 65840478 65845023 -
2 domain predictions
2 GO terms