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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • G3DSA:2.60.120.740
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 27 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.016s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0323900.1
n.a. Beta-galactosidase; TAIR: AT5G63810.1 beta-galactosidase 10; Swiss-Prot: sp|Q5N8X6|BGAL3_ORYSJ Beta-galactosidase 3; TrEMBL-Plants: tr|A0A0B2RCT6|A0A0B2RCT6_GLYSO Beta-galactosidase 10; Found in the gene: LotjaGi1g1v0323900 LjG1.1_chr1 77568060 77576525 -
2 domain predictions
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LotjaGi1g1v0323900.2
n.a. Beta-galactosidase; TAIR: AT5G63810.1 beta-galactosidase 10; Swiss-Prot: sp|Q5N8X6|BGAL3_ORYSJ Beta-galactosidase 3; TrEMBL-Plants: tr|A0A0R0KAT4|A0A0R0KAT4_SOYBN Beta-galactosidase; Found in the gene: LotjaGi1g1v0323900 LjG1.1_chr1 77568072 77576604 -
2 domain predictions
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LotjaGi1g1v0559100.1
n.a. Beta-galactosidase; TAIR: AT2G16730.1 glycosyl hydrolase family 35 protein; Swiss-Prot: sp|Q9SCU9|BGA13_ARATH Beta-galactosidase 13; TrEMBL-Plants: tr|G7J8I0|G7J8I0_MEDTR Beta-galactosidase; Found in the gene: LotjaGi1g1v0559100 LjG1.1_chr1 109142838 109147384 +
2 domain predictions
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LotjaGi2g1v0361100.1
n.a. Beta-galactosidase; TAIR: AT2G28470.1 beta-galactosidase 8; Swiss-Prot: sp|Q9SCV4|BGAL8_ARATH Beta-galactosidase 8; TrEMBL-Plants: tr|A0A0B2S2A3|A0A0B2S2A3_GLYSO Beta-galactosidase; Found in the gene: LotjaGi2g1v0361100 LjG1.1_chr2 85856325 85868186 -
2 domain predictions
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LotjaGi2g1v0361300.1
n.a. Beta-galactosidase; TAIR: AT2G28470.1 beta-galactosidase 8; Swiss-Prot: sp|Q9SCV4|BGAL8_ARATH Beta-galactosidase 8; TrEMBL-Plants: tr|A0A0R0HHN6|A0A0R0HHN6_SOYBN Beta-galactosidase; Found in the gene: LotjaGi2g1v0361300 LjG1.1_chr2 85869969 85873028 -
2 domain predictions
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LotjaGi2g1v0361300.2
n.a. Beta-galactosidase; TAIR: AT2G28470.1 beta-galactosidase 8; Swiss-Prot: sp|Q9SCV4|BGAL8_ARATH Beta-galactosidase 8; TrEMBL-Plants: tr|A0A0B2S2A3|A0A0B2S2A3_GLYSO Beta-galactosidase; Found in the gene: LotjaGi2g1v0361300 LjG1.1_chr2 85869969 85876371 -
2 domain predictions
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LotjaGi2g1v0361300.3
n.a. Beta-galactosidase; TAIR: AT2G28470.1 beta-galactosidase 8; Swiss-Prot: sp|Q9SCV4|BGAL8_ARATH Beta-galactosidase 8; TrEMBL-Plants: tr|A0A0B2S2A3|A0A0B2S2A3_GLYSO Beta-galactosidase; Found in the gene: LotjaGi2g1v0361300 LjG1.1_chr2 85870390 85888386 -
2 domain predictions
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LotjaGi2g1v0361300.4
n.a. Beta-galactosidase; TAIR: AT2G28470.1 beta-galactosidase 8; Swiss-Prot: sp|Q9SCV4|BGAL8_ARATH Beta-galactosidase 8; TrEMBL-Plants: tr|A0A0B2S2A3|A0A0B2S2A3_GLYSO Beta-galactosidase; Found in the gene: LotjaGi2g1v0361300 LjG1.1_chr2 85870390 85888386 -
2 domain predictions
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LotjaGi2g1v0361300.5
n.a. Beta-galactosidase; TAIR: AT2G28470.1 beta-galactosidase 8; Swiss-Prot: sp|Q9SCV4|BGAL8_ARATH Beta-galactosidase 8; TrEMBL-Plants: tr|A0A0B2S2A3|A0A0B2S2A3_GLYSO Beta-galactosidase; Found in the gene: LotjaGi2g1v0361300 LjG1.1_chr2 85876812 85889592 -
2 domain predictions
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LotjaGi2g1v0361300.6
n.a. Beta-galactosidase; TAIR: AT2G28470.1 beta-galactosidase 8; Swiss-Prot: sp|Q9SCV4|BGAL8_ARATH Beta-galactosidase 8; TrEMBL-Plants: tr|A0A0B2S2A3|A0A0B2S2A3_GLYSO Beta-galactosidase; Found in the gene: LotjaGi2g1v0361300 LjG1.1_chr2 85877797 85888849 -
2 domain predictions
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LotjaGi2g1v0361300.7
n.a. Beta-galactosidase; TAIR: AT2G28470.1 beta-galactosidase 8; Swiss-Prot: sp|Q9SCV4|BGAL8_ARATH Beta-galactosidase 8; TrEMBL-Plants: tr|A0A0B2S2A3|A0A0B2S2A3_GLYSO Beta-galactosidase; Found in the gene: LotjaGi2g1v0361300 LjG1.1_chr2 85877797 85889030 -
2 domain predictions
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LotjaGi2g1v0385700.1
n.a. Beta-galactosidase; TAIR: AT4G36360.1 beta-galactosidase 3; Swiss-Prot: sp|Q9SCV9|BGAL3_ARATH Beta-galactosidase 3; TrEMBL-Plants: tr|A0A1J7H344|A0A1J7H344_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0385700 LjG1.1_chr2 88169272 88178901 +
2 domain predictions
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LotjaGi3g1v0012300.1
n.a. Beta-galactosidase; TAIR: AT5G20710.1 beta-galactosidase 7; Swiss-Prot: sp|P49676|BGAL_BRAOL Beta-galactosidase; TrEMBL-Plants: tr|A0A151UGS6|A0A151UGS6_CAJCA Beta-galactosidase; Found in the gene: LotjaGi3g1v0012300 LjG1.1_chr3 1332202 1335175 +
2 domain predictions
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LotjaGi3g1v0025600.1
n.a. Beta-galactosidase; TAIR: AT3G13750.1 beta galactosidase 1; Swiss-Prot: sp|Q9SCW1|BGAL1_ARATH Beta-galactosidase 1; TrEMBL-Plants: tr|A2Q448|A2Q448_MEDTR Beta-galactosidase; Found in the gene: LotjaGi3g1v0025600 LjG1.1_chr3 2787397 2794833 +
2 domain predictions
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LotjaGi3g1v0025600.3
n.a. Beta-galactosidase; TAIR: AT3G13750.1 beta galactosidase 1; Swiss-Prot: sp|Q9SCW1|BGAL1_ARATH Beta-galactosidase 1; TrEMBL-Plants: tr|A2Q448|A2Q448_MEDTR Beta-galactosidase; Found in the gene: LotjaGi3g1v0025600 LjG1.1_chr3 2787697 2793675 +
2 domain predictions
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LotjaGi3g1v0161400.1
n.a. Beta-galactosidase; TAIR: AT2G28470.1 beta-galactosidase 8; Swiss-Prot: sp|Q9SCV4|BGAL8_ARATH Beta-galactosidase 8; TrEMBL-Plants: tr|I1M4L7|I1M4L7_SOYBN Beta-galactosidase; Found in the gene: LotjaGi3g1v0161400 LjG1.1_chr3 22010208 22017407 +
2 domain predictions
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LotjaGi3g1v0161400.4
n.a. Beta-galactosidase; TAIR: AT2G28470.1 beta-galactosidase 8; Swiss-Prot: sp|Q9SCV4|BGAL8_ARATH Beta-galactosidase 8; TrEMBL-Plants: tr|I1M4L7|I1M4L7_SOYBN Beta-galactosidase; Found in the gene: LotjaGi3g1v0161400 LjG1.1_chr3 22011063 22016905 +
2 domain predictions
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LotjaGi3g1v0161400.5
n.a. Beta-galactosidase; TAIR: AT2G28470.1 beta-galactosidase 8; Swiss-Prot: sp|Q9SCV4|BGAL8_ARATH Beta-galactosidase 8; TrEMBL-Plants: tr|I1M4L7|I1M4L7_SOYBN Beta-galactosidase; Found in the gene: LotjaGi3g1v0161400 LjG1.1_chr3 22011230 22016905 +
2 domain predictions
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LotjaGi3g1v0425600.1
n.a. Beta-galactosidase; TAIR: AT3G13750.1 beta galactosidase 1; Swiss-Prot: sp|Q9SCW1|BGAL1_ARATH Beta-galactosidase 1; TrEMBL-Plants: tr|A0A151SHS2|A0A151SHS2_CAJCA Beta-galactosidase; Found in the gene: LotjaGi3g1v0425600 LjG1.1_chr3 83515070 83521726 -
2 domain predictions
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LotjaGi3g1v0521000.1
n.a. Beta-galactosidase; TAIR: AT2G16730.1 glycosyl hydrolase family 35 protein; Swiss-Prot: sp|Q9SCU9|BGA13_ARATH Beta-galactosidase 13; TrEMBL-Plants: tr|G7JNE5|G7JNE5_MEDTR Beta-galactosidase; Found in the gene: LotjaGi3g1v0521000 LjG1.1_chr3 93728902 93734800 +
2 domain predictions
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LotjaGi4g1v0123300.1
n.a. Beta-galactosidase; TAIR: AT4G36360.1 beta-galactosidase 3; Swiss-Prot: sp|Q9SCV9|BGAL3_ARATH Beta-galactosidase 3; TrEMBL-Plants: tr|I1JCK7|I1JCK7_SOYBN Beta-galactosidase; Found in the gene: LotjaGi4g1v0123300 LjG1.1_chr4 17840789 17846951 -
2 domain predictions
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LotjaGi4g1v0123300.2
n.a. Beta-galactosidase; TAIR: AT4G36360.1 beta-galactosidase 3; Swiss-Prot: sp|Q9SCV9|BGAL3_ARATH Beta-galactosidase 3; TrEMBL-Plants: tr|I1JCK7|I1JCK7_SOYBN Beta-galactosidase; Found in the gene: LotjaGi4g1v0123300 LjG1.1_chr4 17841365 17846574 -
2 domain predictions
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LotjaGi4g1v0309300.1
n.a. Beta-galactosidase; TAIR: AT3G13750.1 beta galactosidase 1; Swiss-Prot: sp|P48980|BGAL_SOLLC Beta-galactosidase; TrEMBL-Plants: tr|I1MSH3|I1MSH3_SOYBN Beta-galactosidase; Found in the gene: LotjaGi4g1v0309300 LjG1.1_chr4 68527439 68533567 +
2 domain predictions
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LotjaGi4g1v0309300.2
n.a. Beta-galactosidase; TAIR: AT3G13750.1 beta galactosidase 1; Swiss-Prot: sp|P48980|BGAL_SOLLC Beta-galactosidase; TrEMBL-Plants: tr|A0A0R0GTD1|A0A0R0GTD1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0309300 LjG1.1_chr4 68527636 68532991 +
2 domain predictions
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LotjaGi4g1v0309300.3
n.a. Beta-galactosidase; TAIR: AT3G13750.1 beta galactosidase 1; Swiss-Prot: sp|P48980|BGAL_SOLLC Beta-galactosidase; TrEMBL-Plants: tr|A0A0R0FIV9|A0A0R0FIV9_SOYBN Beta-galactosidase; Found in the gene: LotjaGi4g1v0309300 LjG1.1_chr4 68527708 68532991 +
2 domain predictions
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LotjaGi4g1v0309300.4
n.a. Beta-galactosidase; TAIR: AT3G13750.1 beta galactosidase 1; Swiss-Prot: sp|P48980|BGAL_SOLLC Beta-galactosidase; TrEMBL-Plants: tr|A0A0R0FIV9|A0A0R0FIV9_SOYBN Beta-galactosidase; Found in the gene: LotjaGi4g1v0309300 LjG1.1_chr4 68527978 68532991 +
2 domain predictions
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LotjaGi6g1v0080500.1
n.a. Beta-galactosidase; TAIR: AT5G20710.1 beta-galactosidase 7; Swiss-Prot: sp|Q9SCV5|BGAL7_ARATH Beta-galactosidase 7; TrEMBL-Plants: tr|G7IYF9|G7IYF9_MEDTR Beta-galactosidase; Found in the gene: LotjaGi6g1v0080500 LjG1.1_chr6 15430606 15433339 -
2 domain predictions
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