Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PS00322
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 78 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 0.040s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0007419.1
n.a. Histone H3.3 [Arabidopsis thaliana] gi|15236103|ref|NP_195713.1| chr0 2890121 2891389 -
2 domain predictions
2 GO terms
Lj0g3v0094589.1
n.a. Hypothetical protein CBG05841 [Caenorhabditis briggsae] gi|268536014|ref|XP_002633142.1| chr0 39771942 39772928 -
2 domain predictions
2 GO terms
Lj0g3v0315519.1
n.a. histone H3, expressed [Triticum aestivum] gi|300681467|emb|CBH32561.1| chr0 164706414 164707367 -
2 domain predictions
2 GO terms
Lj0g3v0346529.1
n.a. histone H3 [Zea mays] gi|195611240|gb|ACG27450.1| chr0 181783706 181784418 +
2 domain predictions
2 GO terms
Lj0g3v0359319.1
n.a. PREDICTED: histone H3.2-like [Solanum lycopersicum] gi|460414483|ref|XP_004252600.1| chr0 189178245 189178643 +
2 domain predictions
2 GO terms
Lj2g3v1706520.1
n.a. Histone H3.3 [Arabidopsis thaliana] gi|15236103|ref|NP_195713.1| chr2 26363783 26365080 +
2 domain predictions
2 GO terms
Lj3g3v3260400.1
n.a. PREDICTED: histone H3.3C-like [Mustela putorius furo] gi|511915213|ref|XP_004776917.1| chr3 40138745 40139284 +
2 domain predictions
2 GO terms
Lj4g3v0486190.1
n.a. histone H3, expressed [Triticum aestivum] gi|300681467|emb|CBH32561.1| chr4 8215755 8216575 -
2 domain predictions
2 GO terms
Lj4g3v0755930.1
n.a. histone H3, partial [Mentha sp]. MC-2012] gi|380293138|gb|AFD50219.1| chr4 11802622 11803014 -
2 domain predictions
2 GO terms
Lj6g3v1126420.1
n.a. histone H3 [Zea mays] gi|195606516|gb|ACG25088.1| chr6 13918370 13919082 +
2 domain predictions
2 GO terms
LotjaGi1g1v0204100.1
n.a. Histone H3; TAIR: AT1G09200.1 Histone superfamily protein; Swiss-Prot: sp|P68429|H32_MEDSA Histone H3.2; TrEMBL-Plants: tr|A0A067J8V0|A0A067J8V0_JATCU Uncharacterized protein; Found in the gene: LotjaGi1g1v0204100 LjG1.1_chr1 43941679 43942700 -
2 domain predictions
2 GO terms
LotjaGi1g1v0204100.2
n.a. Histone H3; TAIR: AT1G09200.1 Histone superfamily protein; Swiss-Prot: sp|P68429|H32_MEDSA Histone H3.2; TrEMBL-Plants: tr|G7L647|G7L647_MEDTR Core histone H2A/H2B/H3/H4; Found in the gene: LotjaGi1g1v0204100 LjG1.1_chr1 43941991 43942541 -
2 domain predictions
2 GO terms
LotjaGi1g1v0512200.1
n.a. Histone H3; TAIR: AT1G09200.1 Histone superfamily protein; Swiss-Prot: sp|P68429|H32_MEDSA Histone H3.2; TrEMBL-Plants: tr|G7L647|G7L647_MEDTR Core histone H2A/H2B/H3/H4; Found in the gene: LotjaGi1g1v0512200 LjG1.1_chr1 103384595 103385025 -
2 domain predictions
2 GO terms
LotjaGi1g1v0512200.2
n.a. Histone H3; TAIR: AT1G09200.1 Histone superfamily protein; Swiss-Prot: sp|P68429|H32_MEDSA Histone H3.2; TrEMBL-Plants: tr|G7L647|G7L647_MEDTR Core histone H2A/H2B/H3/H4; Found in the gene: LotjaGi1g1v0512200 LjG1.1_chr1 103384615 103385163 -
2 domain predictions
2 GO terms
LotjaGi2g1v0382900.1
n.a. Histone H3; TAIR: AT4G40030.2 Histone superfamily protein; Swiss-Prot: sp|P59169|H33_ARATH Histone H3.3; TrEMBL-Plants: tr|K7VSQ3|K7VSQ3_MAIZE Histone H3; Found in the gene: LotjaGi2g1v0382900 LjG1.1_chr2 87931765 87933111 +
2 domain predictions
2 GO terms
LotjaGi2g1v0382900.2
n.a. Histone H3; TAIR: AT4G40030.2 Histone superfamily protein; Swiss-Prot: sp|P59169|H33_ARATH Histone H3.3; TrEMBL-Plants: tr|K7VSQ3|K7VSQ3_MAIZE Histone H3; Found in the gene: LotjaGi2g1v0382900 LjG1.1_chr2 87931765 87933224 +
2 domain predictions
2 GO terms
LotjaGi2g1v0382900.3
n.a. Histone H3; TAIR: AT4G40030.2 Histone superfamily protein; Swiss-Prot: sp|P59169|H33_ARATH Histone H3.3; TrEMBL-Plants: tr|K7VSQ3|K7VSQ3_MAIZE Histone H3; Found in the gene: LotjaGi2g1v0382900 LjG1.1_chr2 87931789 87934000 +
2 domain predictions
2 GO terms
LotjaGi2g1v0382900.4
n.a. Histone H3; TAIR: AT4G40030.2 Histone superfamily protein; Swiss-Prot: sp|P59169|H33_ARATH Histone H3.3; TrEMBL-Plants: tr|K7VSQ3|K7VSQ3_MAIZE Histone H3; Found in the gene: LotjaGi2g1v0382900 LjG1.1_chr2 87931925 87933111 +
2 domain predictions
2 GO terms
LotjaGi2g1v0382900.5
n.a. Histone H3; TAIR: AT4G40030.2 Histone superfamily protein; Swiss-Prot: sp|P59169|H33_ARATH Histone H3.3; TrEMBL-Plants: tr|K7VSQ3|K7VSQ3_MAIZE Histone H3; Found in the gene: LotjaGi2g1v0382900 LjG1.1_chr2 87931958 87933111 +
2 domain predictions
2 GO terms
LotjaGi2g1v0382900.6
n.a. Histone H3; TAIR: AT4G40030.2 Histone superfamily protein; Swiss-Prot: sp|P59169|H33_ARATH Histone H3.3; TrEMBL-Plants: tr|K7VSQ3|K7VSQ3_MAIZE Histone H3; Found in the gene: LotjaGi2g1v0382900 LjG1.1_chr2 87932042 87933129 +
2 domain predictions
2 GO terms
LotjaGi2g1v0382900.7
n.a. Histone H3; TAIR: AT4G40030.2 Histone superfamily protein; Swiss-Prot: sp|P59169|H33_ARATH Histone H3.3; TrEMBL-Plants: tr|K7VSQ3|K7VSQ3_MAIZE Histone H3; Found in the gene: LotjaGi2g1v0382900 LjG1.1_chr2 87932042 87933224 +
2 domain predictions
2 GO terms
LotjaGi3g1v0248100.1
n.a. Histone H3; TAIR: AT4G40030.2 Histone superfamily protein; Swiss-Prot: sp|P59169|H33_ARATH Histone H3.3; TrEMBL-Plants: tr|B6SJQ5|B6SJQ5_MAIZE Histone H3; Found in the gene: LotjaGi3g1v0248100 LjG1.1_chr3 41142370 41143970 -
2 domain predictions
2 GO terms
LotjaGi3g1v0248100.2
n.a. Histone H3; TAIR: AT4G40030.2 Histone superfamily protein; Swiss-Prot: sp|P59169|H33_ARATH Histone H3.3; TrEMBL-Plants: tr|B6SJQ5|B6SJQ5_MAIZE Histone H3; Found in the gene: LotjaGi3g1v0248100 LjG1.1_chr3 41142446 41143337 -
2 domain predictions
2 GO terms
LotjaGi3g1v0248100.4
n.a. Histone H3; TAIR: AT4G40030.2 Histone superfamily protein; Swiss-Prot: sp|P59169|H33_ARATH Histone H3.3; TrEMBL-Plants: tr|V7CZU0|V7CZU0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0248100 LjG1.1_chr3 41142624 41143418 -
2 domain predictions
2 GO terms
LotjaGi3g1v0290800.1
n.a. Histone H3; TAIR: AT1G09200.1 Histone superfamily protein; Swiss-Prot: sp|P68429|H32_MEDSA Histone H3.2; TrEMBL-Plants: tr|G7L647|G7L647_MEDTR Core histone H2A/H2B/H3/H4; Found in the gene: LotjaGi3g1v0290800 LjG1.1_chr3 59255876 59256425 +
2 domain predictions
2 GO terms
LotjaGi3g1v0290800.2
n.a. Histone H3; TAIR: AT1G09200.1 Histone superfamily protein; Swiss-Prot: sp|P68429|H32_MEDSA Histone H3.2; TrEMBL-Plants: tr|A0A0D3GD34|A0A0D3GD34_9ORYZ Uncharacterized protein; Found in the gene: LotjaGi3g1v0290800 LjG1.1_chr3 59255974 59269217 +
2 domain predictions
2 GO terms
LotjaGi3g1v0290800.3
n.a. Histone H3; TAIR: AT1G09200.1 Histone superfamily protein; Swiss-Prot: sp|P68429|H32_MEDSA Histone H3.2; TrEMBL-Plants: tr|G7L647|G7L647_MEDTR Core histone H2A/H2B/H3/H4; Found in the gene: LotjaGi3g1v0290800 LjG1.1_chr3 59256015 59256450 +
2 domain predictions
2 GO terms
LotjaGi3g1v0495500.2
n.a. Histone H3; TAIR: AT1G09200.1 Histone superfamily protein; Swiss-Prot: sp|P68429|H32_MEDSA Histone H3.2; TrEMBL-Plants: tr|G7L647|G7L647_MEDTR Core histone H2A/H2B/H3/H4; Found in the gene: LotjaGi3g1v0495500 LjG1.1_chr3 91371375 91372084 +
2 domain predictions
2 GO terms
LotjaGi3g1v0495500.3
n.a. Histone H3; TAIR: AT1G09200.1 Histone superfamily protein; Swiss-Prot: sp|P68429|H32_MEDSA Histone H3.2; TrEMBL-Plants: tr|G7L647|G7L647_MEDTR Core histone H2A/H2B/H3/H4; Found in the gene: LotjaGi3g1v0495500 LjG1.1_chr3 91371515 91372084 +
2 domain predictions
2 GO terms
LotjaGi3g1v0495500.4
n.a. Histone H3; TAIR: AT1G09200.1 Histone superfamily protein; Swiss-Prot: sp|P68429|H32_MEDSA Histone H3.2; TrEMBL-Plants: tr|G7L647|G7L647_MEDTR Core histone H2A/H2B/H3/H4; Found in the gene: LotjaGi3g1v0495500 LjG1.1_chr3 91371674 91372094 +
2 domain predictions
2 GO terms
LotjaGi4g1v0064100.1
n.a. Histone H3; TAIR: AT1G09200.1 Histone superfamily protein; Swiss-Prot: sp|P68429|H32_MEDSA Histone H3.2; TrEMBL-Plants: tr|G7L647|G7L647_MEDTR Core histone H2A/H2B/H3/H4; Found in the gene: LotjaGi4g1v0064100 LjG1.1_chr4 8014456 8014873 -
2 domain predictions
2 GO terms
LotjaGi4g1v0064100.2
n.a. Histone H3; TAIR: AT1G09200.1 Histone superfamily protein; Swiss-Prot: sp|P68429|H32_MEDSA Histone H3.2; TrEMBL-Plants: tr|G7L647|G7L647_MEDTR Core histone H2A/H2B/H3/H4; Found in the gene: LotjaGi4g1v0064100 LjG1.1_chr4 8014463 8015007 -
2 domain predictions
2 GO terms
LotjaGi4g1v0064100.3
n.a. Histone H3; TAIR: AT1G09200.1 Histone superfamily protein; Swiss-Prot: sp|P68429|H32_MEDSA Histone H3.2; TrEMBL-Plants: tr|G7L647|G7L647_MEDTR Core histone H2A/H2B/H3/H4; Found in the gene: LotjaGi4g1v0064100 LjG1.1_chr4 8014463 8024810 -
2 domain predictions
2 GO terms
LotjaGi4g1v0064100.4
n.a. Histone H3; TAIR: AT1G09200.1 Histone superfamily protein; Swiss-Prot: sp|P68429|H32_MEDSA Histone H3.2; TrEMBL-Plants: tr|G7L647|G7L647_MEDTR Core histone H2A/H2B/H3/H4; Found in the gene: LotjaGi4g1v0064100 LjG1.1_chr4 8024353 8024810 -
2 domain predictions
2 GO terms
LotjaGi4g1v0064100.5
n.a. Histone H3; TAIR: AT1G09200.1 Histone superfamily protein; Swiss-Prot: sp|P68429|H32_MEDSA Histone H3.2; TrEMBL-Plants: tr|G7L647|G7L647_MEDTR Core histone H2A/H2B/H3/H4; Found in the gene: LotjaGi4g1v0064100 LjG1.1_chr4 8024400 8024891 -
2 domain predictions
2 GO terms
LotjaGi4g1v0064100.6
n.a. Histone H3; TAIR: AT1G09200.1 Histone superfamily protein; Swiss-Prot: sp|P68429|H32_MEDSA Histone H3.2; TrEMBL-Plants: tr|G7L647|G7L647_MEDTR Core histone H2A/H2B/H3/H4; Found in the gene: LotjaGi4g1v0064100 LjG1.1_chr4 8024400 8025110 -
2 domain predictions
2 GO terms
LotjaGi4g1v0094100.1
n.a. Histone H3; TAIR: AT4G40030.2 Histone superfamily protein; Swiss-Prot: sp|P59169|H33_ARATH Histone H3.3; TrEMBL-Plants: tr|K7VSQ3|K7VSQ3_MAIZE Histone H3; Found in the gene: LotjaGi4g1v0094100 LjG1.1_chr4 12638594 12645967 -
2 domain predictions
2 GO terms
LotjaGi4g1v0094100.2
n.a. Histone H3; TAIR: AT4G40030.2 Histone superfamily protein; Swiss-Prot: sp|P59169|H33_ARATH Histone H3.3; TrEMBL-Plants: tr|K7VSQ3|K7VSQ3_MAIZE Histone H3; Found in the gene: LotjaGi4g1v0094100 LjG1.1_chr4 12644667 12645456 -
2 domain predictions
2 GO terms
LotjaGi4g1v0094100.3
n.a. Histone H3; TAIR: AT4G40030.2 Histone superfamily protein; Swiss-Prot: sp|P59169|H33_ARATH Histone H3.3; TrEMBL-Plants: tr|V7CZU0|V7CZU0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0094100 LjG1.1_chr4 12644685 12645536 -
2 domain predictions
2 GO terms
LotjaGi4g1v0094100.4
n.a. Histone H3; TAIR: AT4G40030.2 Histone superfamily protein; Swiss-Prot: sp|P59169|H33_ARATH Histone H3.3; TrEMBL-Plants: tr|K7VSQ3|K7VSQ3_MAIZE Histone H3; Found in the gene: LotjaGi4g1v0094100 LjG1.1_chr4 12644685 12645728 -
2 domain predictions
2 GO terms
LotjaGi4g1v0407000.1
n.a. Histone H3; TAIR: AT1G09200.1 Histone superfamily protein; Swiss-Prot: sp|P68429|H32_MEDSA Histone H3.2; TrEMBL-Plants: tr|G7L647|G7L647_MEDTR Core histone H2A/H2B/H3/H4; Found in the gene: LotjaGi4g1v0407000 LjG1.1_chr4 78333186 78334221 -
2 domain predictions
2 GO terms
LotjaGi4g1v0407000.2
n.a. Histone H3; TAIR: AT1G09200.1 Histone superfamily protein; Swiss-Prot: sp|P68429|H32_MEDSA Histone H3.2; TrEMBL-Plants: tr|G7L647|G7L647_MEDTR Core histone H2A/H2B/H3/H4; Found in the gene: LotjaGi4g1v0407000 LjG1.1_chr4 78333430 78334031 -
2 domain predictions
2 GO terms
LotjaGi4g1v0407000.3
n.a. Histone H3; TAIR: AT1G09200.1 Histone superfamily protein; Swiss-Prot: sp|P68429|H32_MEDSA Histone H3.2; TrEMBL-Plants: tr|G7L647|G7L647_MEDTR Core histone H2A/H2B/H3/H4; Found in the gene: LotjaGi4g1v0407000 LjG1.1_chr4 78333439 78334031 -
2 domain predictions
2 GO terms
LotjaGi5g1v0009100.1
n.a. Histone H3; TAIR: AT4G40030.2 Histone superfamily protein; Swiss-Prot: sp|P59169|H33_ARATH Histone H3.3; TrEMBL-Plants: tr|K7VSQ3|K7VSQ3_MAIZE Histone H3; Found in the gene: LotjaGi5g1v0009100 LjG1.1_chr5 1964760 1966835 +
2 domain predictions
2 GO terms
LotjaGi5g1v0009100.2
n.a. Histone H3; TAIR: AT4G40030.2 Histone superfamily protein; Swiss-Prot: sp|P59169|H33_ARATH Histone H3.3; TrEMBL-Plants: tr|K7VSQ3|K7VSQ3_MAIZE Histone H3; Found in the gene: LotjaGi5g1v0009100 LjG1.1_chr5 1965017 1966020 +
2 domain predictions
2 GO terms
LotjaGi6g1v0081600.1
n.a. Histone H3; TAIR: AT4G40030.2 Histone superfamily protein; Swiss-Prot: sp|P59169|H33_ARATH Histone H3.3; TrEMBL-Plants: tr|K7VSQ3|K7VSQ3_MAIZE Histone H3; Found in the gene: LotjaGi6g1v0081600 LjG1.1_chr6 15619929 15622459 -
2 domain predictions
2 GO terms
LotjaGi6g1v0081600.2
n.a. Histone H3; TAIR: AT4G40030.1 Histone superfamily protein; Swiss-Prot: sp|P59169|H33_ARATH Histone H3.3; TrEMBL-Plants: tr|K7VSQ3|K7VSQ3_MAIZE Histone H3; Found in the gene: LotjaGi6g1v0081600 LjG1.1_chr6 15620027 15620972 -
2 domain predictions
2 GO terms
LotjaGi6g1v0081600.3
n.a. Histone H3; TAIR: AT4G40030.1 Histone superfamily protein; Swiss-Prot: sp|P59169|H33_ARATH Histone H3.3; TrEMBL-Plants: tr|B6SJQ5|B6SJQ5_MAIZE Histone H3; Found in the gene: LotjaGi6g1v0081600 LjG1.1_chr6 15620027 15620972 -
2 domain predictions
2 GO terms
LotjaGi6g1v0081600.4
n.a. Histone H3; TAIR: AT4G40030.1 Histone superfamily protein; Swiss-Prot: sp|P59169|H33_ARATH Histone H3.3; TrEMBL-Plants: tr|B6SJQ5|B6SJQ5_MAIZE Histone H3; Found in the gene: LotjaGi6g1v0081600 LjG1.1_chr6 15620027 15621218 -
2 domain predictions
2 GO terms
LotjaGi6g1v0081600.5
n.a. Histone H3; TAIR: AT4G40030.1 Histone superfamily protein; Swiss-Prot: sp|P59169|H33_ARATH Histone H3.3; TrEMBL-Plants: tr|K7VSQ3|K7VSQ3_MAIZE Histone H3; Found in the gene: LotjaGi6g1v0081600 LjG1.1_chr6 15620260 15620972 -
2 domain predictions
2 GO terms