Domain Predictions — View

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IPR011023

Source: InterPro

Description

IPR011023 is a Nop2p.

<p>This domain is found in archaeal, bacterial and eukaryotic proteins.</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0003723 View details of GO:0003723 AmiGO InterPro QuickGO	Molecular function	RNA binding	Interacting selectively and non-covalently with an RNA molecule or a portion thereof.	Subterm of GO:0003676
GO:0006364 View details of GO:0006364 AmiGO InterPro QuickGO	Biological process	RRNA processing	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.	Subterm of GO:0016072 GO:0034470 Part of GO:0042254
GO:0008757 View details of GO:0008757 AmiGO InterPro QuickGO	Molecular function	S-adenosylmethionine-dependent methyltransferase activity	Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a substrate.	Subterm of GO:0008168

Associated Lotus transcripts 2

Transcript	Name	Description	Predicted domains	Domain count
Lj6g3v0727750.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	AT5G55920 [Arabidopsis thaliana] gi\|222423014\|dbj\|BAH19490.1\|	Domains G3DSA:3.40.50.150 IPR001678 IPR011023 IPR018314 IPR023267 IPR029063 PF01189 PR02008 PS01153 PS51686 PTHR22807 PTHR22807:SF30 SSF53335 TIGR00446 mobidb-lite	15
LotjaGi6g1v0141300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ribosomal RNA small subunit methyltransferase b; TAIR: AT4G26600.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp\|Q922K7\|NOP2_MOUSE Probable 28S rRNA (cytosine-C(5))-methyltransferase; TrEMBL-Plants: tr\|I1N087\|I1N087_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0141300	Domains Coil G3DSA:3.30.70.3130 G3DSA:3.40.50.150 IPR001678 IPR011023 IPR018314 IPR023267 IPR023273 IPR029063 IPR031341 PF01189 PF17125 PR02008 PR02012 PS01153 PS51686 PTHR22807 PTHR22807:SF59 SSF53335 TIGR00446 mobidb-lite	21

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	50.00