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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0709000 |
| Transcript ID | LotjaGi1g1v0709000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 11S seed storage globulin; TAIR: AT5G44120.3 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P11828|GLYG3_SOYBN Glycinin G3; TrEMBL-Plants: tr|B5U8K6|B5U8K6_LOTJA Legumin storage protein 5; Found in the gene: LotjaGi1g1v0709000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:127716683..127719526) extracted from Lotus japonicus Gifu genome v1.2.
GCCACATGCCCTGTCACACAAGATGAGGTGTAACACACAAAGCTTCCATAGCCATGCAAGCTGAAGAGTGTCTAACGTTC AGCATCTCACACTCTATGACGTGTCCCTCCTCAACCCTCCTCTCTCCCCTATAAATCACCAACCCTTCAGGTTCTCCGCT TCACACCAAACAAGCAAACATTCTCAGCTTCATTAATAATGGCTAAGCTTCTTGTGCTTTCACTCTCCTTCTGTTTTCTT CTCTTCGGTGGCTGCTTCGCTATCCGACAGCAGTCACAACAACAAAACGAGTGCCAGCTTGAACGCCTTAATGCACTTAA ACCAGATAACCGCATAGAGTCTGAAGCTGGCTTCATTGAGACATGGAACCCCACCAACAACCAGTTCCGGTGTGCTGGCG TCGCCTTCTCCCGCTGCACCCTCCGCCGCAATGGCCTTGAAAGACCCTCCTACTCCAATGCCCCCCAGGAAATTTTCATC CAACAAGGTTCATTCATTCATCCACTTCAAATTTTCTATTTTTCACATATTGAAAAATGATTTCTCTGTAAATTAATTTT AACACATTAGGAGCGTATTATACTTAACATGTTATGTTTCTAACTGATATTGTGTTTTTTTGTTGTGGAACAGGTAGTGG AATATTTGGCATGATATTTCCAGGTTGTCCTGAGACTGTTGAAGAGCCATTTGAATCTGATCAACAGGGGCGCCGAGACA GGCACCAGAAGGTGAACCGGTTCAGGGAGGGTGATGTGATCGCAGTGCCTCCAGGTGTTGTTTTCTGGATGTACAATGAG GAAGAAACTCCTGTTATTGCTGTTTCTCTTATGGACACCAGCAGCTACCTCAACCAGCTTGATCAGATGCCTAGGGTGAG CTACCTACTTAGTACTTACCATGCATGCATTACTGCATTAATAACTCCAAGCCTGATTCATTTTTGGCTTATTCACCATG CAAGTTCACCATTATATCATGATAACTCTATAAGTGATGACCATAGATTATAGTAACTGTGAACACTTTTGATTCATTTA CACTCTTTTTTATATCTTATTTTCATTCACATTTTTTTCTATTATTGAACACTATAGTCTAAACATGGTCATAAAACTGT ATAAACAATCATAATTTTTAAACTCCACAGCATCACATGCAGTGAGTTACATATATCTCATTTTCCTCTATATTTTATGA CATTATATACATATTATGGACAATTTTATGGTGCACGATCTACTATGAGTCATATTTTACTACTAAAGTTATTTAATCTG CTAAAAATGACTTGGAGAAAAAATCTTTTAACAAGCTAGATAGAAACAAAGATATTCTATTGTTCTTGGATAGACATTTA GGATTTATCTCTTTTCTCCTTCTTTTTCCAAAACATTTTCACCAACAATATAACAGTAACATTTTTTTTTGGCAATTATC TGTTTTTGACAGAGATTCTATCTATCTGGCAATCAAGAGAACGAGTTCCTCCAATACCAGCGACAGGAGATGAGAGGAAA GGAAGAAGAGAACCAAGGCGGAAACATTTTCAGTGGCTTCGGCGGAGAATTCTTGGAGCATGCCTTGAACATCGACAGGG ACATAGTTCACAAGCTCCAAGGAAAGGACGAAGAGCAGGACAAGGGAGCCATTGTTAGAGTCAAAGGAGGCCTCAGCGTC ATAACCCCACCAGAGAGGCAATCACATCGCCGAGGCAGCGAAGAAGAGGAAGATGAGGAGGAGGACCGCCCAAGCCGCCA CCAAAGCAGAGGAGGAAGCAGGCGAAATGGCCTTGAGGAAACCATCTGCACCATGAGAATCCGCATGAACATTGGCAAAT CCTCATCACCTGACTTCTACAACCCTCAAGCTGGTCGCATCAAAACCATCTCCAGCATGGATTTCCCAGCTCTCAGGTGG ATCAAACTCAGCGCTGAGCATGGTTCTATCAACAGGGTATTCAAACATATAGTCACTGCTCTGTTTTCAATTACTCTGTT TTTCAATTGCTCTGTTTTCAATTGTTCTGTTTTTGGTGCAGAATGCTATGGTGGTGCCTCACTACAATATAAACGCAAAC AGCATTATCTACGCATTGAGGGGAAAAGCGTGGATTCAAGTTGTGAATTGCAAAGGTAACAGAATCTTCGATGGAGAGCT TGAAGAGGGTCAGGTGCTGATTGTGCCACAAAACTTTGCTATTGCTGCAAGATCCACGAGCGACAAGTTCAATTACATCT CGTTCAAGACCCATGAAATGCCCTGGATGGCGAAACTTGCAGGTGCTGCGTCCGCGTTTGAGGCAATGCCGTTGGAAGTG ATCCAGAATTCATTCAACTTGGAGAGGGATCAGGCGAAGCAGATTAAGAACAACAACAGGTTCAACTTTCTGGTTCCACC CCGTGAGCAGTCTCAGAGGAGAGCCTCTGCTTAGAATCTAAGAGAGGGGAACTTTTTGTATGCAAGACATGTGTGCTGAT ATGTGCACTTTTGTCTTTCCGGCACTTGTGAAGTAATAAATAATGATGATAAATAAAAGAGCAAAGGCTTTGATGTCTTT GTTACATGTAAAATTGAATATGTGATGTGTTCTATGAGTACCTTTGTTATCTTGAGTCATCTTAACTTTATGCGGGAAGA GAATGAAATTAAAAGGGGAACTTGCAATTGCAATACCTTATGATTTTCTGTTCTATTCACATATTAAATACATCTCCACC TAGCGCGGAGAAGAATAAATGAGATATAATAAAGACTTAAATGCTTAATTGGCCATGAAATTATAAAGGAAATTAAACTC GATGCTTCTAAAATTTTCGCATTAAATTAGGTTTCTAAAAAATA
CDS sequence (LotjaGi1g1v0709000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTAAGCTTCTTGTGCTTTCACTCTCCTTCTGTTTTCTTCTCTTCGGTGGCTGCTTCGCTATCCGACAGCAGTCACA ACAACAAAACGAGTGCCAGCTTGAACGCCTTAATGCACTTAAACCAGATAACCGCATAGAGTCTGAAGCTGGCTTCATTG AGACATGGAACCCCACCAACAACCAGTTCCGGTGTGCTGGCGTCGCCTTCTCCCGCTGCACCCTCCGCCGCAATGGCCTT GAAAGACCCTCCTACTCCAATGCCCCCCAGGAAATTTTCATCCAACAAGGTAGTGGAATATTTGGCATGATATTTCCAGG TTGTCCTGAGACTGTTGAAGAGCCATTTGAATCTGATCAACAGGGGCGCCGAGACAGGCACCAGAAGGTGAACCGGTTCA GGGAGGGTGATGTGATCGCAGTGCCTCCAGGTGTTGTTTTCTGGATGTACAATGAGGAAGAAACTCCTGTTATTGCTGTT TCTCTTATGGACACCAGCAGCTACCTCAACCAGCTTGATCAGATGCCTAGGAGATTCTATCTATCTGGCAATCAAGAGAA CGAGTTCCTCCAATACCAGCGACAGGAGATGAGAGGAAAGGAAGAAGAGAACCAAGGCGGAAACATTTTCAGTGGCTTCG GCGGAGAATTCTTGGAGCATGCCTTGAACATCGACAGGGACATAGTTCACAAGCTCCAAGGAAAGGACGAAGAGCAGGAC AAGGGAGCCATTGTTAGAGTCAAAGGAGGCCTCAGCGTCATAACCCCACCAGAGAGGCAATCACATCGCCGAGGCAGCGA AGAAGAGGAAGATGAGGAGGAGGACCGCCCAAGCCGCCACCAAAGCAGAGGAGGAAGCAGGCGAAATGGCCTTGAGGAAA CCATCTGCACCATGAGAATCCGCATGAACATTGGCAAATCCTCATCACCTGACTTCTACAACCCTCAAGCTGGTCGCATC AAAACCATCTCCAGCATGGATTTCCCAGCTCTCAGGTGGATCAAACTCAGCGCTGAGCATGGTTCTATCAACAGGAATGC TATGGTGGTGCCTCACTACAATATAAACGCAAACAGCATTATCTACGCATTGAGGGGAAAAGCGTGGATTCAAGTTGTGA ATTGCAAAGGTAACAGAATCTTCGATGGAGAGCTTGAAGAGGGTCAGGTGCTGATTGTGCCACAAAACTTTGCTATTGCT GCAAGATCCACGAGCGACAAGTTCAATTACATCTCGTTCAAGACCCATGAAATGCCCTGGATGGCGAAACTTGCAGGTGC TGCGTCCGCGTTTGAGGCAATGCCGTTGGAAGTGATCCAGAATTCATTCAACTTGGAGAGGGATCAGGCGAAGCAGATTA AGAACAACAACAGGTTCAACTTTCTGGTTCCACCCCGTGAGCAGTCTCAGAGGAGAGCCTCTGCTTAG
Protein sequence (LotjaGi1g1v0709000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKLLVLSLSFCFLLFGGCFAIRQQSQQQNECQLERLNALKPDNRIESEAGFIETWNPTNNQFRCAGVAFSRCTLRRNGL ERPSYSNAPQEIFIQQGSGIFGMIFPGCPETVEEPFESDQQGRRDRHQKVNRFREGDVIAVPPGVVFWMYNEEETPVIAV SLMDTSSYLNQLDQMPRRFYLSGNQENEFLQYQRQEMRGKEEENQGGNIFSGFGGEFLEHALNIDRDIVHKLQGKDEEQD KGAIVRVKGGLSVITPPERQSHRRGSEEEEDEEEDRPSRHQSRGGSRRNGLEETICTMRIRMNIGKSSSPDFYNPQAGRI KTISSMDFPALRWIKLSAEHGSINRNAMVVPHYNINANSIIYALRGKAWIQVVNCKGNRIFDGELEEGQVLIVPQNFAIA ARSTSDKFNYISFKTHEMPWMAKLAGAASAFEAMPLEVIQNSFNLERDQAKQIKNNNRFNFLVPPREQSQRRASA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 21 | 21 | - | – | |
| SignalP_EUK | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 21 | 21 | - | – | |
| ProSiteProfiles | 1 | 19 | 19 | 5.0 | – | |
| SignalP_GRAM_POSITIVE | 1 | 28 | 28 | - | – | |
| Phobius | 4 | 16 | 13 | - | – | |
| PANTHER | 10 | 469 | 460 | 1.1E-227 | – | |
| PANTHER | 10 | 469 | 460 | 1.1E-227 | – | |
| SUPERFAMILY | 17 | 458 | 442 | 2.23E-79 | ||
| Phobius | 17 | 21 | 5 | - | – | |
| Gene3D | 20 | 304 | 285 | 4.7E-106 | ||
| Phobius | 22 | 475 | 454 | - | – | |
| Pfam | 37 | 186 | 150 | 1.6E-33 | ||
| SMART | 37 | 230 | 194 | 2.8E-28 | ||
| MobiDBLite | 233 | 292 | 60 | - | – | |
| MobiDBLite | 260 | 287 | 28 | - | – | |
| ProSitePatterns | 289 | 311 | 23 | - | ||
| PRINTS | 301 | 318 | 18 | 1.1E-38 | ||
| SMART | 302 | 451 | 150 | 1.8E-31 | ||
| Gene3D | 305 | 474 | 170 | 1.8E-45 | ||
| Pfam | 311 | 450 | 140 | 1.2E-28 | ||
| PRINTS | 324 | 344 | 21 | 1.1E-38 | ||
| PRINTS | 370 | 386 | 17 | 1.1E-38 | ||
| PRINTS | 388 | 403 | 16 | 1.1E-38 | ||
| PRINTS | 406 | 424 | 19 | 1.1E-38 | ||
| PRINTS | 428 | 445 | 18 | 1.1E-38 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nutrient reservoir activity | Functions in the storage of nutritious substrates. |
Expression pattern of LotjaGi1g1v0709000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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