Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0709200 |
| Transcript ID | LotjaGi1g1v0709200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 11S seed storage globulin; TAIR: AT5G44120.3 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P11828|GLYG3_SOYBN Glycinin G3; TrEMBL-Plants: tr|B5U8K6|B5U8K6_LOTJA Legumin storage protein 5; Found in the gene: LotjaGi1g1v0709200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:127728792..127734101) extracted from Lotus japonicus Gifu genome v1.2.
CACGAATTTGATAGCACCCTACTTCTTATGGGTGGTCCTCTCAGACTGGCCATACAATTAGTAATCAATCCTAAGTAGTA ATAAATTTGTTAATTAGTAATGTGGTCAGTTTTGCTCATGTGGGTTGTAAAAATAACATTACAGTTCGCGTCTTAAAAGA TGCTTTCCAAAATAACTCCTATGTGGAATCTGTTTTAGCGGTCGAATTTGAGGGCGAGGTTGAGTGGGGTATCGTGGACA AGGACAAATATGATGGTTGCATAAAATCTGGTGGTAAATGTGGATACAACACAACTTTAAACAAGTTTATGTATCTTTGT CTTGAAGGATAATATGTGGGAGTTTGCAGCAAAGAACAGTCTCATCCTAGTGCGAGTATGTGTTCTTCCTTTTCTTAATT TGTATTCTTATTATTATGCTAAAATTATGTCATTTCAATAGTTTAATTCACTATCATGTTGGTGAATTAGACCAGTTTAT TAGTTGCCATTAATCATTTATTTTCACTTGCTTATTGTCTAGGGGGTCCAGTTTAATTATTCAATACTATTGAATATTAT AATTTCCAACCGTTAAAACATTACTGAAGCATGAAGTTTATTATCAATTGGACTGCACCTGAATACCAGTTTGTGTGAAA AGTGGTGAGCGTTGTTGGTCTAATAATTATAAGTTTATAACTTATAAATTCCTCTGGTTCTCCATGAAATCCTAGACTTG TACACGAGGAGTTGTACCTTAATAATGTCATCCATATAAGCCTTTCGAGATAATAGTTGCTTGCAAGTAATCTTGTCGTG ACGTTATGAATGTGTCGGTTTGAGTCTGCTTAGCTATAAATTAAATGAAATGAAACTCACTTTTAGCCTTTTTCGGCTGA TCATTATGTAGTTCACTTAGCTGTGGATCCATTAAACTGTACATTGGGCCGGTAACTTCTTGTGCCGGCTGAGAACAAGG AGGAAGTACAAAGATGCTATCTACTGATGCCATCATATTCGACCAAAAAAAAAAATGAGACACATCATTTGTAATAAACT TGGTCTTGGATCCTTAAACATTGCAAGACAACAATTTTGTTGACGGTCCCCCAAGAACCATTACTAGATTTATAACAACC AGAGGACGGTCTCATTTTCTCTATATATCCACCCAATCAAATCACTACTGAAGCAGTAATTATGCTTGCCAAAAACAGCC CAGTCCACTGTGATTACACATGAAACGGTGTTGGTCCAAGCCTCCAAGGCACCATTGCTGGATTTAACCTTGCACCTGCA AACTCAGTCCTCCCATTCATAATTGTGAACACATAGCCAACAACTGCAACACAGAACAGAACAAATTAAAACAAGCTTGG TCTCTGTTTCGTTATGGATCGATGTTGCCAGCGTGTTGAGGCCACCTGCCCTGTCACACAAGATGAGGTGTAACACACAA AGCTTCCATAGCCATGCAAGCTGAAGAGTGTCTAATGCTCACCACCCCACATTCTATGACGTGTCCTTCCTCCACCCTCC TCTCCACCCTATAAATCACCAGCCCCTCAGGTTCTCCGCTTCACACCAAACAAGCAAACATTCTCTCCTTCACCATTAAT AATGGCTTATAAGCTTTTTGCGCTTTCCCTCTCCTTCTGTTTTCTTCTCTTTGGTGGCTGCTTTGCTATCCGACAGCAGT CGCAGCAACAAAACGAGTGCCAGCTTGAACGCCTTAATGCACTTAAACCAGATAACCGCATAGAGTCTGAAGCTGGCTAC ATTGAGACATGGAACCCCACCAACAACCAATTCCGGTGTGCCGGTGTGGCCTTATCTCGCTGCACCCTCCGCCGCAATGG CCTTAAAAGACCCTCTTACTCCAATGCTCCCCAGGAAATTTTCATCCAACAAGGTTCATTCATTCATCCACTTCAAATTT TCTATTTTTCACATATTGAAATGATTTATCTGTAAATTAATTTTAACACATTAGGAGCATATTATACTTAACATGTTATG TTTCTAACTGATATTGTGGTTTTTTTTTTGTTGTGGAACAGGTAGTGGAATATTTGGCATGATATTTCCAGGTTGTCCTG AGACTGTTGAAGAGCCATTTGAATCTGATCAACAGGGGCGCCGAGACAGGCACCAGAAGGTGAACCGGTTCAGGGAAGGT GATGTGATCGCAGTGCCTCCAGGTGTTGTTTTCTGGATGTACAATGAGGAAGAAACTCCTGTTATTGCTGTTTCTCTTAT TGACACAGGCAGCTACCTCAACCAGCTTGATCAGATGCCTAGGGTGAGCTACCTACCAACCATGCATGCATTAGTTACCA AATAACTCCAAGCCTGATTCATTTTTGGCGTACTCACCCTGCATGTTCACCACTAAAACATGATAATTTGATAAGTGATG TCCATGATTTGACTATAGTAACGCTATATAGTCTAAAGATTGTCATGACACTATATAAACAAGGAATATTAGTACATAAT TGTACAATAAATACATCCAATAGACACGTAAAATAATAATAATAATAATTATTGTGATATATGATGTGATTTTATAAGAA AAAAAAGAGATGTTTGCTCTGCGATTTATATGTCTAAGTAATATGATTTTATAAGAAGAGAGATAAATATTTGTACGGAT ATTTAAGTATATTACTGAACAAATTATTTTTGACTTCTAAATACCTCATTATATAGAGACAAACACTTGACATACATTTC ATTTACCCTCATATTTTATCACTGTCATATAAATCAATGATTTATTCTTTCTTTCTTAATCTTGGGTGGTGCCAAAACAT TTTCTTAACCAATTGGTAAGAGTAAGTTCTAACACTAAGTACTCCTTCCTTTTACAAAGGAAAGATCATTTTCATTTACC TAATTTAATTTTTTAGTAGATGCTTATCCAATAATTCTATTACCAAACAGGCATTAAGAGTATATTTGGTTTTTCATGTA TTAGTACATTCAATCACATTTTGTTTCTTGGAATACCATGCTAACTTCAATGTCATTTATCTGAATGGAGTTACTTACGC ATTTCTATAAATGGTGAAACAAACACGCTCTAATAGATTTTGGCAATTATTTGCTTGTGACAGAGATTCTATCTTTCTGG GAATCAAGAGCAAGAGTTCCTACAATACCAGCGACAGGAGGTGAGAGGAAGGGAAGAAGAGAACCAAGGTGGAAACATTT TCAGCGGCTTCGGTGGAGAATTCTTGGAAGATGCCTTGAACATCGACAGGAACATAGTTCACAAGCTCCAAGGAAGGGAC GAAGAGCAGGACAAGGGAGCCATTGTTAGAGTCAAAGGAGGCCTCAGCGTCATAACCCCACCAGAGAGGCAATCACATCG CCGAGGCAGCGAAGAAGAGGAAGATGAGGAGGAGGACCGCCCAAGCCGCCACCAAAGCAGAGGTGGAAGCAGGAGAAATG GCCTTGAGGAAACCATCTGCACCGTGAGACTCCGCATGAACATTGGCAAATCCTCCTCCCCTGACATCTTTAACCCTCAA GCTGGTCGCATCAAAACAGCCACCGGCTTTGACTTCCCAGCTCTTAGGTTCCTCAAACTCAGCGCTGAGCATGGTTCTCT CAACAGGGTACTTTAATTTTCCCTCGTTTTTCAAAAAGATGGCTATTGCTCTGTTTTTCAATTGCTCTGTTTTTCATTTA CTCTGTTTTTTTTCAATTCCTCTGTTTTTCAATTGCTCTGTTTTTTCATGTGTAATGCAGAATGCTATGGTGGTGCCTCA CTACAATCTGAACGCAAACAGCATAATCTACGCATTGAGGGGAAGGGCGTGGATACAAGTGGTGAATTGCAAAGGAAACA GAATCTTCGATGGGGAGCTTGAAGAGGGTCAGGTGCTGATTGTGCCACAAAACTTTGTTGTGGCTGCAAGATCCATGAGT GACAAGTTCAATTACGTGGCGTTCAAGACCAATGACATGCCCACGATGGCCAAGCTTGCAGGTGCAACCTCTGAGATTCA GGCGATGCCATTGGAGGTGATCCAGAATGCATTCAACCTGGAGAGGGAGCAGGCGAAGCAGGTGAAGTTCAACAACAGGT TCAACTTTCTTGTTCCACCCCGTGAGCAGTCTCAGAGGAGAGCCTCTGCTTAGAATCTAAGAGAGGGAAACTTTTTGAAT GCGAGACATATGTGCTCCTATGGCTATGTGCACTTTTGTCTTTTCTGAGTAATAAGAATAATGATGATCATGAATAAAGA AGCAAAGGCTTAGATGTCTTTGTTAAATGTAAAATTGAAAATGTGATGTGTTCTGTAAAGAGAATTGAAATGCTAATTTT TGTTATTGTTCTTAAAAACGTTTGCTTACAATTATAATAAGTGAAAAATCTATATGGTAGGGAACGACTATTTTGATACC AACTACTATTTCCAATCCGGTCCACGGACAATCCAAATTTGCTCAAGAATGCAATCAGGGAGAGGTGCCCTACCTCCTGA TTCATGAAAAACAACACACGGGCGGTCTCGAATCAACTCATCGTCTATATGTCCCTCCCTGAAACCAACCTCTGAAAGCA AGCACAAGAGCCTAAGCACCATGCCCCAATTACAATAAACTCCACCATCCAAAAAGTGCTCCTCAACCCAACCACCACCC TTTGCAACAAAATGCTCCTTCAGCTTCTCCACAACCTTGACAAAATCAAGGTCAACATCCCCAACCAAAAGGCTAGGGCT AGCAGCAACAGCATCCACCAAAGTGGAAGCTGCAACACCAAGCTCCTCATAAGCCTTCAGCTTCAAACTCAACCCCAGAT TCATATTTAACACAAAAATAGGATACAAAGTGAGGAAAGCAAATTAATTGTTTGAGTGGAAAAATGTGATCATAGTTCTT CAATCAATCAACCCACTCATCATATCGCTGGAAATCCTCCTCCTTGAAGGGAAACTTCTCTGGCCATTTACACATTTTTC AGTATCCGCAAAATGGTGATGTGGTGAAAAAATTTAGAAAAAACAAATACAACCAAGTTTTCAGCAAATGTCAAGCAAAA AGTGGAACACAAGACTTTAGCCCATGAGAGACATGTTGAAATCAGTTGAGAAGTTTAGCACCAGACAAAATAACTCTTTT GCATTGCTTGAATTGTTCTAAACCATTAACAATATCCCTTATTTCAGAGCTTGAATAATGAGGCAAACATCACCTCTGTA CACAACCTATTCATGATACAGATATGCAGAATTTCATATTTTAAAGTTCTTGAACTTGCTACTTCTATATTTAAACCAAG AATATGAATATGTTTGAATCATTCAATTTT
CDS sequence (LotjaGi1g1v0709200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTATAAGCTTTTTGCGCTTTCCCTCTCCTTCTGTTTTCTTCTCTTTGGTGGCTGCTTTGCTATCCGACAGCAGTC GCAGCAACAAAACGAGTGCCAGCTTGAACGCCTTAATGCACTTAAACCAGATAACCGCATAGAGTCTGAAGCTGGCTACA TTGAGACATGGAACCCCACCAACAACCAATTCCGGTGTGCCGGTGTGGCCTTATCTCGCTGCACCCTCCGCCGCAATGGC CTTAAAAGACCCTCTTACTCCAATGCTCCCCAGGAAATTTTCATCCAACAAGGTAGTGGAATATTTGGCATGATATTTCC AGGTTGTCCTGAGACTGTTGAAGAGCCATTTGAATCTGATCAACAGGGGCGCCGAGACAGGCACCAGAAGGTGAACCGGT TCAGGGAAGGTGATGTGATCGCAGTGCCTCCAGGTGTTGTTTTCTGGATGTACAATGAGGAAGAAACTCCTGTTATTGCT GTTTCTCTTATTGACACAGGCAGCTACCTCAACCAGCTTGATCAGATGCCTAGGAGATTCTATCTTTCTGGGAATCAAGA GCAAGAGTTCCTACAATACCAGCGACAGGAGGTGAGAGGAAGGGAAGAAGAGAACCAAGGTGGAAACATTTTCAGCGGCT TCGGTGGAGAATTCTTGGAAGATGCCTTGAACATCGACAGGAACATAGTTCACAAGCTCCAAGGAAGGGACGAAGAGCAG GACAAGGGAGCCATTGTTAGAGTCAAAGGAGGCCTCAGCGTCATAACCCCACCAGAGAGGCAATCACATCGCCGAGGCAG CGAAGAAGAGGAAGATGAGGAGGAGGACCGCCCAAGCCGCCACCAAAGCAGAGGTGGAAGCAGGAGAAATGGCCTTGAGG AAACCATCTGCACCGTGAGACTCCGCATGAACATTGGCAAATCCTCCTCCCCTGACATCTTTAACCCTCAAGCTGGTCGC ATCAAAACAGCCACCGGCTTTGACTTCCCAGCTCTTAGGTTCCTCAAACTCAGCGCTGAGCATGGTTCTCTCAACAGGAA TGCTATGGTGGTGCCTCACTACAATCTGAACGCAAACAGCATAATCTACGCATTGAGGGGAAGGGCGTGGATACAAGTGG TGAATTGCAAAGGAAACAGAATCTTCGATGGGGAGCTTGAAGAGGGTCAGGTGCTGATTGTGCCACAAAACTTTGTTGTG GCTGCAAGATCCATGAGTGACAAGTTCAATTACGTGGCGTTCAAGACCAATGACATGCCCACGATGGCCAAGCTTGCAGG TGCAACCTCTGAGATTCAGGCGATGCCATTGGAGGTGATCCAGAATGCATTCAACCTGGAGAGGGAGCAGGCGAAGCAGG TGAAGTTCAACAACAGGTTCAACTTTCTTGTTCCACCCCGTGAGCAGTCTCAGAGGAGAGCCTCTGCTTAG
Protein sequence (LotjaGi1g1v0709200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAYKLFALSLSFCFLLFGGCFAIRQQSQQQNECQLERLNALKPDNRIESEAGYIETWNPTNNQFRCAGVALSRCTLRRNG LKRPSYSNAPQEIFIQQGSGIFGMIFPGCPETVEEPFESDQQGRRDRHQKVNRFREGDVIAVPPGVVFWMYNEEETPVIA VSLIDTGSYLNQLDQMPRRFYLSGNQEQEFLQYQRQEVRGREEENQGGNIFSGFGGEFLEDALNIDRNIVHKLQGRDEEQ DKGAIVRVKGGLSVITPPERQSHRRGSEEEEDEEEDRPSRHQSRGGSRRNGLEETICTVRLRMNIGKSSSPDIFNPQAGR IKTATGFDFPALRFLKLSAEHGSLNRNAMVVPHYNLNANSIIYALRGRAWIQVVNCKGNRIFDGELEEGQVLIVPQNFVV AARSMSDKFNYVAFKTNDMPTMAKLAGATSEIQAMPLEVIQNAFNLEREQAKQVKFNNRFNFLVPPREQSQRRASA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 4 | 4 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 22 | 22 | - | – | |
| SignalP_EUK | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 22 | 22 | - | – | |
| ProSiteProfiles | 1 | 20 | 20 | 5.0 | – | |
| Phobius | 5 | 17 | 13 | - | – | |
| PANTHER | 11 | 470 | 460 | 3.5E-231 | – | |
| PANTHER | 11 | 470 | 460 | 3.5E-231 | – | |
| SUPERFAMILY | 14 | 459 | 446 | 2.19E-78 | ||
| Phobius | 18 | 22 | 5 | - | – | |
| Gene3D | 21 | 305 | 285 | 4.6E-105 | ||
| Phobius | 23 | 476 | 454 | - | – | |
| SMART | 38 | 231 | 194 | 6.1E-28 | ||
| Pfam | 38 | 188 | 151 | 1.1E-33 | ||
| MobiDBLite | 247 | 291 | 45 | - | – | |
| MobiDBLite | 261 | 288 | 28 | - | – | |
| ProSitePatterns | 290 | 312 | 23 | - | ||
| PRINTS | 302 | 319 | 18 | 2.0E-39 | ||
| SMART | 303 | 452 | 150 | 4.3E-40 | ||
| Gene3D | 306 | 475 | 170 | 6.1E-46 | ||
| Pfam | 311 | 451 | 141 | 1.8E-29 | ||
| PRINTS | 325 | 345 | 21 | 2.0E-39 | ||
| PRINTS | 371 | 387 | 17 | 2.0E-39 | ||
| PRINTS | 389 | 404 | 16 | 2.0E-39 | ||
| PRINTS | 407 | 425 | 19 | 2.0E-39 | ||
| PRINTS | 429 | 446 | 18 | 2.0E-39 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nutrient reservoir activity | Functions in the storage of nutritious substrates. |
Expression pattern of LotjaGi1g1v0709200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…