Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

IPR031660

Source: InterPro

Description

IPR031660 is a C-terminal associated domain of TOPRIM.

<p>This domain is found as the C-terminal extension of the TOPRIM domain ([interpro:IPR006171]) .</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 5

Transcript	Name	Description	Predicted domains	Domain count
Lj3g3v0826110.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: DNA topoisomerase 2-like [Glycine max] gi\|356555329\|ref\|XP_003545986.1\|	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:1.10.268.10 G3DSA:3.30.1360.40 G3DSA:3.30.1490.30 G3DSA:3.40.50.670 G3DSA:3.90.199.10 IPR001154 IPR001241 IPR002205 IPR006171 IPR013757 IPR013758 IPR013759 IPR013760 IPR018522 IPR024946 IPR031660 NON_CYTOPLASMIC_DOMAIN PF00521 PF01751 PF16898 PR00418 PR01158 PS00177 PS50880 PTHR10169 PTHR10169:SF38 SM00433 SM00434 SSF56719 TRANSMEMBRANE cd00187 cd03365 mobidb-lite	35
Lj4g3v0877830.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: DNA topoisomerase 2-like [Cicer arietinum] gi\|502128025\|ref\|XP_004499912.1\|	Domains G3DSA:3.30.1490.30 G3DSA:3.40.50.670 G3DSA:3.90.199.10 IPR001154 IPR001241 IPR002205 IPR006171 IPR013758 IPR013759 IPR013760 IPR031660 PF00521 PF16898 PR00418 PR01158 PS50880 PTHR10169 PTHR10169:SF38 SM00434 SSF56719	20
LotjaGi3g1v0121000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA topoisomerase 2; TAIR: AT3G23890.1 topoisomerase II; Swiss-Prot: sp\|O24308\|TOP2_PEA DNA topoisomerase 2; TrEMBL-Plants: tr\|I1MJQ7\|I1MJQ7_SOYBN DNA topoisomerase 2; Found in the gene: LotjaGi3g1v0121000	Domains Coil G3DSA:1.10.268.10 G3DSA:3.30.1360.40 G3DSA:3.30.1490.30 G3DSA:3.30.230.10 G3DSA:3.30.565.10 G3DSA:3.40.50.670 G3DSA:3.90.199.10 IPR001154 IPR001241 IPR002205 IPR003594 IPR006171 IPR013506 IPR013757 IPR013758 IPR013759 IPR013760 IPR014721 IPR018522 IPR020568 IPR031660 IPR034157 IPR036890 PF00204 PF00521 PF01751 PF02518 PF16898 PR00418 PR01158 PS00177 PS50880 PTHR10169 PTHR10169:SF38 SM00433 SM00434 SSF54211 SSF55874 SSF56719 cd00187 cd03365 cd03481 cd16930 mobidb-lite	45
LotjaGi3g1v0121000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA topoisomerase 2; TAIR: AT3G23890.2 topoisomerase II; Swiss-Prot: sp\|O24308\|TOP2_PEA DNA topoisomerase 2; TrEMBL-Plants: tr\|I1MJQ7\|I1MJQ7_SOYBN DNA topoisomerase 2; Found in the gene: LotjaGi3g1v0121000	Domains Coil G3DSA:1.10.268.10 G3DSA:3.30.1360.40 G3DSA:3.30.1490.30 G3DSA:3.30.230.10 G3DSA:3.30.565.10 G3DSA:3.40.50.670 G3DSA:3.90.199.10 IPR001154 IPR001241 IPR002205 IPR003594 IPR006171 IPR013506 IPR013757 IPR013758 IPR013759 IPR013760 IPR014721 IPR018522 IPR020568 IPR031660 IPR034157 IPR036890 PF00204 PF00521 PF01751 PF02518 PF16898 PR00418 PR01158 PS00177 PS50880 PTHR10169 PTHR10169:SF38 SM00433 SM00434 SSF54211 SSF55874 SSF56719 cd00187 cd03365 cd03481 cd16930 mobidb-lite	45
LotjaGi4g1v0112600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA topoisomerase 2; TAIR: AT3G23890.1 topoisomerase II; Swiss-Prot: sp\|O24308\|TOP2_PEA DNA topoisomerase 2; TrEMBL-Plants: tr\|A0A151TWJ6\|A0A151TWJ6_CAJCA DNA topoisomerase 2; Found in the gene: LotjaGi4g1v0112600	Domains Coil G3DSA:1.10.268.10 G3DSA:3.30.1360.40 G3DSA:3.30.1490.30 G3DSA:3.90.199.10 IPR001154 IPR002205 IPR013757 IPR013758 IPR013760 IPR031660 PF00521 PF16898 PR00418 PR01158 PTHR10169 SM00434 SSF56719	18

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
SSF56719	SUPERFAMILY	1	20.00