Domain Predictions — View

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G3DSA:3.30.1360.40

Source: Gene3D

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 14

Transcript	Name	Description	Predicted domains	Domain count
Lj2g3v0146560.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like isoform X1 [Cicer arietinum] gi\|502127538\|ref\|XP_004499748.1\|	Domains G3DSA:2.120.10.90 G3DSA:3.30.1360.40 G3DSA:3.90.199.10 IPR002205 IPR006691 IPR013758 IPR013760 IPR024946 PF00521 PF03989 PTHR10169 PTHR10169:SF48 SM00434 SSF101904 SSF56719 TIGR01063 cd00187 mobidb-lite	18
Lj3g3v0826110.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: DNA topoisomerase 2-like [Glycine max] gi\|356555329\|ref\|XP_003545986.1\|	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:1.10.268.10 G3DSA:3.30.1360.40 G3DSA:3.30.1490.30 G3DSA:3.40.50.670 G3DSA:3.90.199.10 IPR001154 IPR001241 IPR002205 IPR006171 IPR013757 IPR013758 IPR013759 IPR013760 IPR018522 IPR024946 IPR031660 NON_CYTOPLASMIC_DOMAIN PF00521 PF01751 PF16898 PR00418 PR01158 PS00177 PS50880 PTHR10169 PTHR10169:SF38 SM00433 SM00434 SSF56719 TRANSMEMBRANE cd00187 cd03365 mobidb-lite	35
LotjaGi1g1v0383300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ribosome-recycling factor; TAIR: AT3G01800.1 Ribosome recycling factor; Swiss-Prot: sp\|Q3A398\|RRF_PELCD Ribosome-recycling factor; TrEMBL-Plants: tr\|I1M0P2\|I1M0P2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0383300	Domains Coil G3DSA:1.10.132.20 G3DSA:3.30.1360.40 IPR002661 IPR023584 IPR036191 PF01765 PTHR20982 PTHR20982:SF3 SSF55194	10
LotjaGi2g1v0064900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA gyrase subunit A; TAIR: AT3G10690.1 DNA GYRASE A; Swiss-Prot: sp\|Q5YLB5\|GYRA_NICBE DNA gyrase subunit A, chloroplastic/mitochondrial; TrEMBL-Plants: tr\|G7I9Z9\|G7I9Z9_MEDTR DNA gyrase subunit A; Found in the gene: LotjaGi2g1v0064900	Domains G3DSA:1.10.268.10 G3DSA:2.120.10.90 G3DSA:3.30.1360.40 G3DSA:3.90.199.10 IPR002205 IPR005743 IPR006691 IPR013757 IPR013758 IPR013760 IPR035516 MF_01897 PF00521 PF03989 PTHR43493 PTHR43493:SF3 SM00434 SSF101904 SSF56719 TIGR01063 cd00187 mobidb-lite	22
LotjaGi2g1v0064900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA gyrase subunit A; TAIR: AT3G10690.1 DNA GYRASE A; Swiss-Prot: sp\|Q5YLB5\|GYRA_NICBE DNA gyrase subunit A, chloroplastic/mitochondrial; TrEMBL-Plants: tr\|I1L2U5\|I1L2U5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0064900	Domains G3DSA:1.10.268.10 G3DSA:2.120.10.90 G3DSA:3.30.1360.40 G3DSA:3.90.199.10 IPR002205 IPR006691 IPR013757 IPR013758 IPR013760 IPR035516 PF00521 PF03989 PTHR43493 PTHR43493:SF3 SM00434 SSF101904 SSF56719 TIGR01063 cd00187 mobidb-lite	20
LotjaGi2g1v0064900.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA gyrase subunit A; TAIR: AT3G10690.1 DNA GYRASE A; Swiss-Prot: sp\|Q5YLB5\|GYRA_NICBE DNA gyrase subunit A, chloroplastic/mitochondrial; TrEMBL-Plants: tr\|G7I9Z9\|G7I9Z9_MEDTR DNA gyrase subunit A; Found in the gene: LotjaGi2g1v0064900	Domains G3DSA:1.10.268.10 G3DSA:2.120.10.90 G3DSA:3.30.1360.40 G3DSA:3.90.199.10 IPR002205 IPR006691 IPR013757 IPR013758 IPR013760 IPR035516 PF00521 PF03989 PTHR43493 PTHR43493:SF3 SM00434 SSF101904 SSF56719 TIGR01063 cd00187 mobidb-lite	20
LotjaGi2g1v0064900.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA gyrase subunit A; TAIR: AT3G10690.1 DNA GYRASE A; Swiss-Prot: sp\|Q5YLB5\|GYRA_NICBE DNA gyrase subunit A, chloroplastic/mitochondrial; TrEMBL-Plants: tr\|G7I9Z9\|G7I9Z9_MEDTR DNA gyrase subunit A; Found in the gene: LotjaGi2g1v0064900	Domains G3DSA:1.10.268.10 G3DSA:2.120.10.90 G3DSA:3.30.1360.40 G3DSA:3.90.199.10 IPR002205 IPR006691 IPR013757 IPR013758 IPR013760 IPR035516 PF00521 PF03989 PTHR43493 PTHR43493:SF3 SM00434 SSF101904 SSF56719 cd00187 mobidb-lite	19
LotjaGi3g1v0121000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA topoisomerase 2; TAIR: AT3G23890.1 topoisomerase II; Swiss-Prot: sp\|O24308\|TOP2_PEA DNA topoisomerase 2; TrEMBL-Plants: tr\|I1MJQ7\|I1MJQ7_SOYBN DNA topoisomerase 2; Found in the gene: LotjaGi3g1v0121000	Domains Coil G3DSA:1.10.268.10 G3DSA:3.30.1360.40 G3DSA:3.30.1490.30 G3DSA:3.30.230.10 G3DSA:3.30.565.10 G3DSA:3.40.50.670 G3DSA:3.90.199.10 IPR001154 IPR001241 IPR002205 IPR003594 IPR006171 IPR013506 IPR013757 IPR013758 IPR013759 IPR013760 IPR014721 IPR018522 IPR020568 IPR031660 IPR034157 IPR036890 PF00204 PF00521 PF01751 PF02518 PF16898 PR00418 PR01158 PS00177 PS50880 PTHR10169 PTHR10169:SF38 SM00433 SM00434 SSF54211 SSF55874 SSF56719 cd00187 cd03365 cd03481 cd16930 mobidb-lite	45
LotjaGi3g1v0121000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA topoisomerase 2; TAIR: AT3G23890.2 topoisomerase II; Swiss-Prot: sp\|O24308\|TOP2_PEA DNA topoisomerase 2; TrEMBL-Plants: tr\|I1MJQ7\|I1MJQ7_SOYBN DNA topoisomerase 2; Found in the gene: LotjaGi3g1v0121000	Domains Coil G3DSA:1.10.268.10 G3DSA:3.30.1360.40 G3DSA:3.30.1490.30 G3DSA:3.30.230.10 G3DSA:3.30.565.10 G3DSA:3.40.50.670 G3DSA:3.90.199.10 IPR001154 IPR001241 IPR002205 IPR003594 IPR006171 IPR013506 IPR013757 IPR013758 IPR013759 IPR013760 IPR014721 IPR018522 IPR020568 IPR031660 IPR034157 IPR036890 PF00204 PF00521 PF01751 PF02518 PF16898 PR00418 PR01158 PS00177 PS50880 PTHR10169 PTHR10169:SF38 SM00433 SM00434 SSF54211 SSF55874 SSF56719 cd00187 cd03365 cd03481 cd16930 mobidb-lite	45
LotjaGi4g1v0112400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA topoisomerase 2; TAIR: AT3G23890.1 topoisomerase II; Swiss-Prot: sp\|O24308\|TOP2_PEA DNA topoisomerase 2; TrEMBL-Plants: tr\|A0A151TWJ6\|A0A151TWJ6_CAJCA DNA topoisomerase 2; Found in the gene: LotjaGi4g1v0112400_LC	Domains Coil G3DSA:1.10.268.10 G3DSA:3.30.1360.40 G3DSA:3.90.199.10 IPR002205 IPR013757 IPR013758 IPR013760 PF00521 PTHR10169 PTHR10169:SF38 SSF56719	12
LotjaGi4g1v0112400_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA topoisomerase 2; TAIR: AT3G23890.1 topoisomerase II; Swiss-Prot: sp\|O24308\|TOP2_PEA DNA topoisomerase 2; TrEMBL-Plants: tr\|A0A151TWJ6\|A0A151TWJ6_CAJCA DNA topoisomerase 2; Found in the gene: LotjaGi4g1v0112400_LC	Domains Coil G3DSA:1.10.268.10 G3DSA:3.30.1360.40 G3DSA:3.90.199.10 IPR002205 IPR013757 IPR013758 IPR013760 PF00521 PTHR10169 PTHR10169:SF38 SSF56719	12
LotjaGi4g1v0112400_LC.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA topoisomerase 2; TAIR: AT3G23890.1 topoisomerase II; Swiss-Prot: sp\|O24308\|TOP2_PEA DNA topoisomerase 2; TrEMBL-Plants: tr\|A0A151TWJ6\|A0A151TWJ6_CAJCA DNA topoisomerase 2; Found in the gene: LotjaGi4g1v0112400_LC	Domains Coil G3DSA:1.10.268.10 G3DSA:3.30.1360.40 G3DSA:3.90.199.10 IPR002205 IPR013757 IPR013758 IPR013760 PF00521 PTHR10169 PTHR10169:SF38 SSF56719	12
LotjaGi4g1v0112600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA topoisomerase 2; TAIR: AT3G23890.1 topoisomerase II; Swiss-Prot: sp\|O24308\|TOP2_PEA DNA topoisomerase 2; TrEMBL-Plants: tr\|A0A151TWJ6\|A0A151TWJ6_CAJCA DNA topoisomerase 2; Found in the gene: LotjaGi4g1v0112600	Domains Coil G3DSA:1.10.268.10 G3DSA:3.30.1360.40 G3DSA:3.30.1490.30 G3DSA:3.90.199.10 IPR001154 IPR002205 IPR013757 IPR013758 IPR013760 IPR031660 PF00521 PF16898 PR00418 PR01158 PTHR10169 SM00434 SSF56719	18
LotjaGi5g1v0167500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ribosome recycling factor; TAIR: AT3G63190.1 ribosome recycling factor, chloroplast precursor; Swiss-Prot: sp\|Q9M1X0\|RRFC_ARATH Ribosome-recycling factor, chloroplastic; TrEMBL-Plants: tr\|I3S931\|I3S931_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0167500	Domains Coil G3DSA:1.10.132.20 G3DSA:3.30.1360.40 IPR002661 IPR023584 IPR036191 MF_00040 PF01765 PTHR20982 PTHR20982:SF8 SSF55194 TIGR00496 cd00520	13

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd00520	CDD	1	7.14