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IPR036871

Description

IPR036871 is a PX domain superfamily.

<p>The PX (phox) domain [[cite:PUB00005042]] occurs in a variety of eukaryotic proteins and have been implicated in highly diverse functions such as cell signalling, vesicular trafficking, protein sorting and lipid modification [[cite:PUB00020791], [cite:PUB00020788], [cite:PUB00010010], [cite:PUB00084390]]. PX domains are important phosphoinositide-binding modules that have varying lipid-binding specificities [[cite:PUB00007152]]. The PX domain is approximately 120 residues long [[cite:PUB00008032]], and folds into a three-stranded β-sheet followed by three -helices and a proline-rich region that immediately preceeds a membrane-interaction loop and spans approximately eight hydrophobic and polar residues. The PX domain of neutrophil cytosol factor 1 (p47phox) binds to the SH3 domain in the same protein [[cite:PUB00008032]]. Phosphorylation of p47(phox), a cytoplasmic activator of the microbicidal phagocyte oxidase (phox), elicits interaction of p47(phox) with phoinositides. The protein phosphorylation-driven conformational change of p47(phox) enables its PX domain to bind to phosphoinositides, the interaction of which plays a crucial role in recruitment of p47(phox) from the cytoplasm to membranes and subsequent activation of the phagocyte oxidase. The lipid-binding activity of this protein is normally suppressed by intramolecular interaction of the PX domain with the C-terminal Src homology 3 (SH3) domain [[cite:PUB00011220]].</p> <p>The PX domain is conserved from yeast to human. A multiple alignment of representative PX domain sequences from eukaryotic proteins [[cite:PUB00006581]], shows relatively little sequence conservation, although their structure appears to be highly conserved. Although phosphatidylinositol-3-phosphate (PtdIns(3)P) is the primary target of PX domains, binding to phosphatidic acid, phosphatidylinositol-3,4-bisphosphate (PtdIns(3,4)P2), phosphatidylinositol-3,5-bisphosphate (PtdIns(3,5)P2), phosphatidylinositol-4,5-bisphosphate (PtdIns(4,5)P2), and phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4,5)P3) has been reported as well. The PX-domain is also a protein-protein interaction domain [[cite:PUB00020786]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Phosphatidylinositol binding Interacting selectively and non-covalently with any inositol-containing glycerophospholipid, i.e. phosphatidylinositol (PtdIns) and its phosphorylated derivatives.

Associated Lotus transcripts 13

Transcript Name Description Predicted domains Domain count
Sorting nexin; TAIR: AT5G58440.1 sorting nexin 2A; Swiss-Prot: sp|Q8L5Z7|SNX2A_ARATH Sorting nexin 2A; TrEMBL-Plants: tr|G7K781|G7K781_MEDTR Sorting nexin 2B; Found in the gene: LotjaGi1g1v0073300 17
Sorting nexin; TAIR: AT5G07120.1 sorting nexin 2B; Swiss-Prot: sp|B9DFS6|SNX2B_ARATH Sorting nexin 2B; TrEMBL-Plants: tr|G7JZQ0|G7JZQ0_MEDTR Sorting nexin 2B; Found in the gene: LotjaGi1g1v0114300 18
Sorting nexin; TAIR: AT5G07120.1 sorting nexin 2B; Swiss-Prot: sp|B9DFS6|SNX2B_ARATH Sorting nexin 2B; TrEMBL-Plants: tr|A0A0L9UWY0|A0A0L9UWY0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0114300 18
Pleckstrin domain-containing family M member 3; TAIR: AT3G48195.1 Phox (PX) domain-containing protein; Swiss-Prot: sp|Q08AW4|PKHM3_XENLA Pleckstrin homology domain-containing family M member 3; TrEMBL-Plants: tr|K7KKY2|K7KKY2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0178800 13
Phox (PX) domain protein; TAIR: AT4G32160.1 Phox (PX) domain-containing protein; Swiss-Prot: sp|F4JTJ2|EREL1_ARATH PX domain-containing protein EREL1; TrEMBL-Plants: tr|I1JUB5|I1JUB5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0382300 11
Sorting nexin-16; TAIR: AT2G15900.1 phox domain-containing protein; Swiss-Prot: sp|Q8C080|SNX16_MOUSE Sorting nexin-16; TrEMBL-Plants: tr|I1ND24|I1ND24_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0009500 21
Phox (PX) domain protein; TAIR: AT3G15920.1 Phox (PX) domain-containing protein; Swiss-Prot: sp|Q9LSB9|EREX_ARATH PX domain-containing protein EREX; TrEMBL-Plants: tr|A0A0B2SGQ6|A0A0B2SGQ6_GLYSO Uncharacterized protein; Found in the gene: LotjaGi3g1v0007700 12
Phox-associated domain,Phox-like,Sorting nexin isoform 1; TAIR: AT1G15240.2 phox (PX) domain-containing protein; Swiss-Prot: sp|P57768|SNX16_HUMAN Sorting nexin-16; TrEMBL-Plants: tr|V7AQ43|V7AQ43_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0366200 20
Phox-associated domain,Phox-like,Sorting nexin isoform 2; TAIR: AT2G15900.1 phox domain-containing protein; Swiss-Prot: sp|Q6PHS6|SNX13_MOUSE Sorting nexin-13; TrEMBL-Plants: tr|A0A0B2RCD7|A0A0B2RCD7_GLYSO Sorting nexin-16; Found in the gene: LotjaGi4g1v0069700 20
Sorting nexin 1; TAIR: AT5G06140.1 sorting nexin 1; Swiss-Prot: sp|Q9FG38|SNX1_ARATH Sorting nexin 1; TrEMBL-Plants: tr|C6TEZ3|C6TEZ3_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0099300 19
Sorting nexin 1; TAIR: AT5G06140.1 sorting nexin 1; Swiss-Prot: sp|Q9FG38|SNX1_ARATH Sorting nexin 1; TrEMBL-Plants: tr|K7K9Q0|K7K9Q0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0099300 13
Sorting nexin 1; TAIR: AT5G06140.1 sorting nexin 1; Swiss-Prot: sp|Q9FG38|SNX1_ARATH Sorting nexin 1; TrEMBL-Plants: tr|C6TEZ3|C6TEZ3_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0099300 18
Sorting nexin 1; TAIR: AT5G06140.1 sorting nexin 1; Swiss-Prot: sp|Q9FG38|SNX1_ARATH Sorting nexin 1; TrEMBL-Plants: tr|A0A0B2SME9|A0A0B2SME9_GLYSO Sorting nexin 1; Found in the gene: LotjaGi5g1v0099300 19

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 7.69