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IPR036873 is a Rhodanese-like domain superfamily.
<p>Rhodanese, a sulphurtransferase involved in cyanide detoxification (see [interpro:IPR001307]) shares evolutionary relationship with a large family of proteins [[cite:PUB00006580]], including <ul> <li>Cdc25 phosphatase catalytic domain.</li> <li>non-catalytic domains of eukaryotic dual-specificity MAPK-phosphatases.</li> <li>non-catalytic domains of yeast PTP-type MAPK-phosphatases.</li> <li>non-catalytic domains of yeast Ubp4, Ubp5, Ubp7.</li> <li>non-catalytic domains of mammalian Ubp-Y.</li> <li>Drosophila heat shock protein HSP-67BB.</li> <li>several bacterial cold-shock and phage shock proteins.</li> <li>plant senescence associated proteins.</li> <li>catalytic and non-catalytic domains of rhodanese (see [interpro:IPR001307]).</li> </ul> <p>Rhodanese has an internal duplication. This domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases [[cite:PUB00002964]]. The structure of this domain is composed of three layers (α/β/α) arranged in parallel β-sheet of five strands.</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Adenylyltransferase and sulfurtransferase MOCS3; TAIR: AT5G55130.1 co-factor for nitrate, reductase and xanthine dehydrogenase 5; Swiss-Prot: sp|Q9ZNW0|MOCS3_ARATH Adenylyltransferase and sulfurtransferase MOCS3; TrEMBL-Plants: tr|G7K8M6|G7K8M6_MEDTR Adenylyltransferase and sulfurtransferase MOCS3; Found in the gene: LotjaGi1g1v0025600 | 18 | ||
| – | Adenylyltransferase and sulfurtransferase MOCS3; TAIR: AT5G55130.1 co-factor for nitrate, reductase and xanthine dehydrogenase 5; Swiss-Prot: sp|Q9ZNW0|MOCS3_ARATH Adenylyltransferase and sulfurtransferase MOCS3; TrEMBL-Plants: tr|I1JJC5|I1JJC5_SOYBN Adenylyltransferase and sulfurtransferase MOCS3; Found in the gene: LotjaGi1g1v0025600 | 14 | ||
| – | Adenylyltransferase and sulfurtransferase MOCS3; TAIR: AT5G55130.1 co-factor for nitrate, reductase and xanthine dehydrogenase 5; Swiss-Prot: sp|Q9ZNW0|MOCS3_ARATH Adenylyltransferase and sulfurtransferase MOCS3; TrEMBL-Plants: tr|I1JJC5|I1JJC5_SOYBN Adenylyltransferase and sulfurtransferase MOCS3; Found in the gene: LotjaGi1g1v0025600 | 14 | ||
| – | Peptidyl-prolyl cis-trans isomerase; TAIR: AT5G19370.1 rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein; Swiss-Prot: sp|Q93WI0|STR12_ARATH Rhodanese-like/PpiC domain-containing protein 12, chloroplastic; TrEMBL-Plants: tr|A7DX11|A7DX11_LOTJA Peptidyl-prolyl cis-trans isomerase; Found in the gene: LotjaGi1g1v0051200 | 15 | ||
| – | UPF0176 protein; TAIR: AT2G40760.1 Rhodanese/Cell cycle control phosphatase superfamily protein; Swiss-Prot: sp|Q1JPN0|STR7_ARATH Rhodanese-like domain-containing protein 7; TrEMBL-Plants: tr|G7KD73|G7KD73_MEDTR Rhodanese-related sulfurtransferase; Found in the gene: LotjaGi1g1v0131400 | 17 | ||
| – | Rhodanese-related sulfurtransferase; TAIR: AT4G24750.1 Rhodanese/Cell cycle control phosphatase superfamily protein; Swiss-Prot: sp|Q0WWT7|STR11_ARATH Rhodanese-like domain-containing protein 11, chloroplastic; TrEMBL-Plants: tr|I3SMJ4|I3SMJ4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0225900 | 10 | ||
| – | Rhodanese-related sulfurtransferase; TAIR: AT4G24750.1 Rhodanese/Cell cycle control phosphatase superfamily protein; Swiss-Prot: sp|Q0WWT7|STR11_ARATH Rhodanese-like domain-containing protein 11, chloroplastic; TrEMBL-Plants: tr|I3SMJ4|I3SMJ4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0225900 | 9 | ||
| – | Rhodanese-related sulfurtransferase; TAIR: AT4G24750.1 Rhodanese/Cell cycle control phosphatase superfamily protein; Swiss-Prot: sp|Q0WWT7|STR11_ARATH Rhodanese-like domain-containing protein 11, chloroplastic; TrEMBL-Plants: tr|I3SMJ4|I3SMJ4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0227400 | 9 | ||
| – | Rhodanese-like domain-containing protein; TAIR: AT4G27700.1 Rhodanese/Cell cycle control phosphatase superfamily protein; Swiss-Prot: sp|Q94A65|STR14_ARATH Rhodanese-like domain-containing protein 14, chloroplastic; TrEMBL-Plants: tr|I3SJT0|I3SJT0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0292400 | 11 | ||
| – | Thiosulfate sulfurtransferase GlpE; TAIR: AT3G25480.1 Rhodanese/Cell cycle control phosphatase superfamily protein; Swiss-Prot: sp|Q56XR7|STR4A_ARATH Rhodanese-like domain-containing protein 4A, chloroplastic; TrEMBL-Plants: tr|G7KSH3|G7KSH3_MEDTR Rhodanese/cell cycle control phosphatase superfamily protein, putative; Found in the gene: LotjaGi1g1v0490300 | 12 | ||
| – | Dual specificity phosphatase Cdc25; TAIR: AT5G03455.1 Rhodanese/Cell cycle control phosphatase superfamily protein; Swiss-Prot: sp|Q8GY31|CDC25_ARATH Dual specificity phosphatase Cdc25; TrEMBL-Plants: tr|I3S2N0|I3S2N0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0687000_LC | 9 | ||
| – | Rhodanese/cell cycle control phosphatase superfamily protein; TAIR: AT2G42220.1 Rhodanese/Cell cycle control phosphatase superfamily protein; Swiss-Prot: sp|O48529|STR9_ARATH Rhodanese-like domain-containing protein 9, chloroplastic; TrEMBL-Plants: tr|I3S806|I3S806_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0724700 | 13 | ||
| – | Thiosulfate sulfurtransferase GlpE; TAIR: AT4G35770.1 Rhodanese/Cell cycle control phosphatase superfamily protein; Swiss-Prot: sp|P27626|DIN1_RAPSA Senescence-associated protein DIN1; TrEMBL-Plants: tr|I3SF35|I3SF35_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0376900 | 15 | ||
| – | Thiosulfate sulfurtransferase GlpE; TAIR: AT5G66170.3 sulfurtransferase 18; Swiss-Prot: sp|Q9FKW8|STR18_ARATH Thiosulfate sulfurtransferase 18; TrEMBL-Plants: tr|I3T7S9|I3T7S9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0380400 | 17 | ||
| – | Sulfurtransferase; TAIR: AT1G79230.1 mercaptopyruvate sulfurtransferase 1; Swiss-Prot: sp|O64530|STR1_ARATH Thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial; TrEMBL-Plants: tr|I3S1J7|I3S1J7_LOTJA Sulfurtransferase; Found in the gene: LotjaGi3g1v0135300 | 21 | ||
| – | Sulfurtransferase; TAIR: AT1G79230.1 mercaptopyruvate sulfurtransferase 1; Swiss-Prot: sp|O64530|STR1_ARATH Thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial; TrEMBL-Plants: tr|I3S1J7|I3S1J7_LOTJA Sulfurtransferase; Found in the gene: LotjaGi3g1v0135300 | 13 | ||
| – | Sulfurtransferase; TAIR: AT1G79230.1 mercaptopyruvate sulfurtransferase 1; Swiss-Prot: sp|O64530|STR1_ARATH Thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial; TrEMBL-Plants: tr|I3S1J7|I3S1J7_LOTJA Sulfurtransferase; Found in the gene: LotjaGi3g1v0135300 | 19 | ||
| – | Rhodanese-like family protein-like protein; TAIR: AT3G08920.1 Rhodanese/Cell cycle control phosphatase superfamily protein; Swiss-Prot: sp|Q9SR92|STR10_ARATH Rhodanese-like domain-containing protein 10; TrEMBL-Plants: tr|V7AJW0|V7AJW0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0208800 | 9 | ||
| – | Rhodanese-like domain-containing protein 4, chloroplastic; TAIR: AT4G01050.1 thylakoid rhodanese-like protein; Swiss-Prot: sp|Q9M158|STR4_ARATH Rhodanese-like domain-containing protein 4, chloroplastic; TrEMBL-Plants: tr|A0A1J7GPE0|A0A1J7GPE0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0393600 | 6 | ||
| – | Thiosulfate sulfurtransferase; TAIR: AT5G66170.3 sulfurtransferase 18; Swiss-Prot: sp|Q9FKW8|STR18_ARATH Thiosulfate sulfurtransferase 18; TrEMBL-Plants: tr|I3T0D4|I3T0D4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0241200 | 10 | ||
| – | Calcium sensing receptor, chloroplastic; TAIR: AT5G23060.1 calcium sensing receptor; Swiss-Prot: sp|Q9FN48|CAS_ARATH Calcium sensing receptor, chloroplastic; TrEMBL-Plants: tr|C6TEH0|C6TEH0_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0260700 | 13 | ||
| – | UPF0176 protein; TAIR: AT1G17850.2 Rhodanese/Cell cycle control phosphatase superfamily protein; Swiss-Prot: sp|F4I933|STR8_ARATH Rhodanese-like domain-containing protein 8, chloroplastic; TrEMBL-Plants: tr|I3T8Y5|I3T8Y5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0466200 | 16 | ||
| – | UPF0176 protein; TAIR: AT1G09280.1 rhodanese-like domain protein; Swiss-Prot: sp|Q94AC1|STR6_ARATH Rhodanese-like domain-containing protein 6; TrEMBL-Plants: tr|A0A072VNW1|A0A072VNW1_MEDTR Phospholipase/carboxylesterase family protein; Found in the gene: LotjaGi5g1v0231600 | 19 | ||
| – | Calcium sensing receptor, chloroplastic; TAIR: AT3G59780.1 Rhodanese/Cell cycle control phosphatase superfamily protein; Swiss-Prot: sp|Q9FN48|CAS_ARATH Calcium sensing receptor, chloroplastic; TrEMBL-Plants: tr|I1MY98|I1MY98_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0039900 | 18 | ||
| – | Calcium sensing receptor, chloroplastic; TAIR: AT3G59780.1 Rhodanese/Cell cycle control phosphatase superfamily protein; Swiss-Prot: sp|Q9FN48|CAS_ARATH Calcium sensing receptor, chloroplastic; TrEMBL-Plants: tr|I1MY98|I1MY98_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0039900 | 14 | ||
| – | Thiosulfate sulfurtransferase GlpE; TAIR: AT2G21045.1 Rhodanese/Cell cycle control phosphatase superfamily protein; Swiss-Prot: sp|Q8RUD6|STR19_ARATH Rhodanese-like domain-containing protein 19, mitochondrial; TrEMBL-Plants: tr|I3S939|I3S939_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0317100 | 10 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd00158 | CDD | 1 | 3.85 |