Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

MF_01454

Source: Hamap

Description

GTPase Obg [obg].

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0000287 View details of GO:0000287 AmiGO InterPro QuickGO	Molecular function	Magnesium ion binding	Interacting selectively and non-covalently with magnesium (Mg) ions.	Subterm of GO:0046872
GO:0003924 View details of GO:0003924 AmiGO InterPro QuickGO	Molecular function	GTPase activity	Catalysis of the reaction: GTP + H2O = GDP + phosphate.	Subterm of GO:0017111
GO:0005525 View details of GO:0005525 AmiGO InterPro QuickGO	Molecular function	GTP binding	Interacting selectively and non-covalently with GTP, guanosine triphosphate.	Subterm of GO:0032550 GO:0032561 GO:0035639

Associated Lotus transcripts 3

Transcript	Name	Description	Predicted domains	Domain count
Lj6g3v1931780.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: GTPase obg-like isoform 1 [Glycine max] gi\|356549083\|ref\|XP_003542927.1\|	Domains Coil G3DSA:2.70.210.12 G3DSA:3.40.50.300 IPR006073 IPR006074 IPR006169 IPR014100 IPR015349 IPR027417 IPR031167 MF_01454 NON_CYTOPLASMIC_DOMAIN PF01018 PF01926 PF09269 PR00326 PS00905 PS51710 PTHR11702 PTHR11702:SF20 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF102741 SSF52540 SSF82051 SignalP-TM_GRAM_POSITIVE TIGR02729 TIGR03595 cd01898 mobidb-lite	32
LotjaGi6g1v0307800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	GTPase obg; TAIR: AT5G18570.1 GTP1/OBG family protein; Swiss-Prot: sp\|Q8L7L0\|OBGC_ARATH GTP-binding protein OBGC, chloroplastic; TrEMBL-Plants: tr\|A0A1J7H1V8\|A0A1J7H1V8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0307800	Domains Coil G3DSA:2.40.240.60 G3DSA:2.70.210.12 G3DSA:3.40.50.300 IPR006073 IPR006074 IPR006169 IPR014100 IPR015349 IPR027417 IPR031167 IPR036346 IPR036726 MF_01454 NON_CYTOPLASMIC_DOMAIN PF01018 PF01926 PF09269 PR00326 PS00905 PS51710 PS51881 PS51883 PTHR11702 PTHR11702:SF31 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF102741 SSF52540 SSF82051 SignalP-TM TIGR02729 TIGR03595 cd01898 mobidb-lite	37
LotjaGi6g1v0307800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	GTPase obg; TAIR: AT5G18570.1 GTP1/OBG family protein; Swiss-Prot: sp\|Q8L7L0\|OBGC_ARATH GTP-binding protein OBGC, chloroplastic; TrEMBL-Plants: tr\|A0A1J7H1V8\|A0A1J7H1V8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0307800	Domains Coil G3DSA:2.40.240.60 G3DSA:2.70.210.12 G3DSA:3.40.50.300 IPR006073 IPR006074 IPR006169 IPR014100 IPR015349 IPR027417 IPR031167 IPR036346 IPR036726 MF_01454 NON_CYTOPLASMIC_DOMAIN PF01018 PF01926 PF09269 PR00326 PS00905 PS51710 PS51881 PS51883 PTHR11702 PTHR11702:SF31 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF102741 SSF52540 SSF82051 SignalP-TM TIGR02729 TIGR03595 cd01898 mobidb-lite	37

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	33.33