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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1931780 |
| Transcript ID | Lj6g3v1931780.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: GTPase obg-like isoform 1 [Glycine max] gi|356549083|ref|XP_003542927.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 3 | 3 | – | – | |
| SignalP | 1 | 17 | 17 | – | – | |
| Phobius | 1 | 17 | 17 | – | – | |
| MobiDBLite | 1 | 165 | 165 | – | – | |
| Phobius | 4 | 12 | 9 | – | – | |
| Phobius | 13 | 17 | 5 | – | – | |
| Phobius | 18 | 633 | 616 | – | – | |
| Coils | 115 | 135 | 21 | – | – | |
| PANTHER | 150 | 508 | 359 | 3.10E-263 | – | |
| PANTHER | 150 | 508 | 359 | 3.10E-263 | – | |
| Hamap | 174 | 500 | 327 | 43.311 | ||
| TIGRFAM | 176 | 498 | 323 | 2.10E-119 | ||
| SUPERFAMILY | 176 | 330 | 155 | 3.40E-47 | ||
| Gene3D | 176 | 326 | 151 | 4.30E-52 | ||
| Pfam | 177 | 330 | 154 | 7.20E-52 | ||
| MobiDBLite | 289 | 314 | 26 | – | – | |
| Gene3D | 327 | 508 | 182 | 6.40E-49 | ||
| CDD | 332 | 499 | 168 | 2.04E-82 | – | |
| ProSiteProfiles | 332 | 500 | 169 | 68.392 | ||
| Pfam | 333 | 453 | 121 | 7.40E-23 | ||
| SUPERFAMILY | 333 | 519 | 187 | 1.09E-44 | ||
| PRINTS | 334 | 354 | 21 | 6.30E-34 | ||
| PRINTS | 355 | 373 | 19 | 6.30E-34 | ||
| PRINTS | 383 | 398 | 16 | 6.30E-34 | ||
| ProSitePatterns | 385 | 398 | 14 | – | ||
| PRINTS | 400 | 418 | 19 | 6.30E-34 | ||
| SUPERFAMILY | 537 | 609 | 73 | 1.19E-18 | ||
| Pfam | 538 | 607 | 70 | 5.00E-18 | ||
| TIGRFAM | 538 | 607 | 70 | 3.10E-15 | ||
| PANTHER | 596 | 609 | 14 | 3.10E-263 | – | |
| PANTHER | 596 | 609 | 14 | 3.10E-263 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Magnesium ion binding | Interacting selectively and non-covalently with magnesium (Mg) ions. | ||
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of Lj6g3v1931780.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1931780.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.