Domain Predictions — View

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SSF102741

Source: SUPERFAMILY

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0000166 View details of GO:0000166 AmiGO InterPro QuickGO	Molecular function	Nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.	Subterm of GO:0036094 GO:1901265

Associated Lotus transcripts 3

Transcript	Name	Description	Predicted domains	Domain count
Lj6g3v1931780.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: GTPase obg-like isoform 1 [Glycine max] gi\|356549083\|ref\|XP_003542927.1\|	Domains Coil G3DSA:2.70.210.12 G3DSA:3.40.50.300 IPR006073 IPR006074 IPR006169 IPR014100 IPR015349 IPR027417 IPR031167 MF_01454 NON_CYTOPLASMIC_DOMAIN PF01018 PF01926 PF09269 PR00326 PS00905 PS51710 PTHR11702 PTHR11702:SF20 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF102741 SSF52540 SSF82051 SignalP-TM_GRAM_POSITIVE TIGR02729 TIGR03595 cd01898 mobidb-lite	32
LotjaGi6g1v0307800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	GTPase obg; TAIR: AT5G18570.1 GTP1/OBG family protein; Swiss-Prot: sp\|Q8L7L0\|OBGC_ARATH GTP-binding protein OBGC, chloroplastic; TrEMBL-Plants: tr\|A0A1J7H1V8\|A0A1J7H1V8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0307800	Domains Coil G3DSA:2.40.240.60 G3DSA:2.70.210.12 G3DSA:3.40.50.300 IPR006073 IPR006074 IPR006169 IPR014100 IPR015349 IPR027417 IPR031167 IPR036346 IPR036726 MF_01454 NON_CYTOPLASMIC_DOMAIN PF01018 PF01926 PF09269 PR00326 PS00905 PS51710 PS51881 PS51883 PTHR11702 PTHR11702:SF31 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF102741 SSF52540 SSF82051 SignalP-TM TIGR02729 TIGR03595 cd01898 mobidb-lite	37
LotjaGi6g1v0307800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	GTPase obg; TAIR: AT5G18570.1 GTP1/OBG family protein; Swiss-Prot: sp\|Q8L7L0\|OBGC_ARATH GTP-binding protein OBGC, chloroplastic; TrEMBL-Plants: tr\|A0A1J7H1V8\|A0A1J7H1V8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0307800	Domains Coil G3DSA:2.40.240.60 G3DSA:2.70.210.12 G3DSA:3.40.50.300 IPR006073 IPR006074 IPR006169 IPR014100 IPR015349 IPR027417 IPR031167 IPR036346 IPR036726 MF_01454 NON_CYTOPLASMIC_DOMAIN PF01018 PF01926 PF09269 PR00326 PS00905 PS51710 PS51881 PS51883 PTHR11702 PTHR11702:SF31 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF102741 SSF52540 SSF82051 SignalP-TM TIGR02729 TIGR03595 cd01898 mobidb-lite	37

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	33.33