Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi6g1v0307800 |
Transcript ID | LotjaGi6g1v0307800.2 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | GTPase obg; TAIR: AT5G18570.1 GTP1/OBG family protein; Swiss-Prot: sp|Q8L7L0|OBGC_ARATH GTP-binding protein OBGC, chloroplastic; TrEMBL-Plants: tr|A0A1J7H1V8|A0A1J7H1V8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0307800 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:62502466..62507826) extracted from Lotus japonicus Gifu genome v1.2.
CAACAATGTTTCGTAGATTGCTTGAGTTGTTCCACTGTCATGAAAATGGCGGCTTCACTCTCACCGTGGTTCTCTCCCAC CGCCTTCGCTCGCTCCAACCCTCGCACACCCAACACCAACAAGCTTTTCCCAGCCTCTAAACTCAAGAAGCAAGCCGCCA AACGCAAGTCCTCGCCGGAACCGGTGGTGCTCTCCGGCGGCGACGCCACTACCTACACTCGTCTTCCTCTCAAGCACGAC TACTCATTCCCCTCTACCCCGCTTTCCACTTCCGAAGTCAAACTCTCCGAGTCAATTCACCGCAGCTACAAACAGAAACC AGGAAAAGAAGAAGAGGAAGAGGAAGAGGAAGAAGAGTTCATTGATGGAAGCTTTGAAGGAAATGTTGATTTTGAATCTG AAGGCGAAGAGGAGGAGGAGGAGGAGGAGGAGGGAGAAGAAGAAGAGGAATTCGGCTATTGGGGTGAAGAGGGTGTTGAG AGTAACGATGTTTCGAGTTTGGAGAACGACGAAAATTCGGACGGTGAGGTGAAGGAGAAGGGGGTGCCGGCGGTGATGCG GTGCTTCGACCGGGCTAAGGTATACGCGAAGGCGGGAAACGGAGGGAATGGGGTGGTGGCGTTCCGCCGGGAGAAGTTCG TGCCGTTAGGGGGGCCGTCGGGTGGAGACGGAGGGAGAGGTGGGAATGTGTTTCTGGAGGTGGATGGGGCAATGAACTCG CTGTTGCCGTTCCGGAACGGCGTGCATTTCAGGGCGGGGAGGGGGTCTCATGGGCAGGGGAGCTTGAAGTGTGGGGCCAA GGGGGAGGATGTAGTGGTGAAGGTGCCGCCGGGGACGGTGGTTAGGGAGGCCGGTGGGGACAGGGTGCTGTTGGAGATGG TGTCTCCCGGACAGAGGGCGTTGTTGTTGCCGGGTGGCCGAGGTGGAAGAGGGAATGCTTCCTTCAAGTCTGGGTCTAAT AAGGTTCCCAAGATTGCTGAGAATGGTGAAGAAGGTCCTGAAATGTGAGCTCTTCTTCAATGCTTTTAAATGCTCATGTG TTATATGCTGTGCTTCCACTATATTCTGTTCAATGATAGTTATATATGATCATGGACAAGATTCAATTTGGTTACAGACT TACATACATGTAGAAGAAGCACGGCCATGTCCAGAACTTAGTTTAGAAATATAATATATGCCTTACAGATGATAGCATTC ACTTTGAGGCAAAAAGAGAACATAACTCTACTTATGGATTGGATGAATGTACTTTCACGTTAACTCAACTGGTATCCAAA CACAATCTTTTGTAATAGCTTTTATCAGCTTATGACATGGTTTCACTACATGTATAACCAAGTCATCTAGAGTTTGATCA TTGTTGTCGTCCATTATTCTAGTAAAAAAGTTGAATTTCAGCACAAGATATGTGAACTTGTGCATTGTCCTACTTTAAAC CCAATGGTCTCTTGCTGAGGGGGCATATTAGAAATATAATATAAAATCATTTACATGTCTTTATCCTACAGCTTAAGTGT TTGCGATAGTTGATTCATGACAATTTTCATCAGAAATAAAAAATAGTTTTAGTTAATACTAATAAAAGCTTGGTGAAATC ATGAACTAACTCGTAACCGATGTCTATTTTTTTTTCTTTTTCCATTTGGTATGATTTCCAAATTATATGAGAGTTTGAGA AGAATGGTTTCTTTTTATCAGGTGGTTGGAGTTGGAACTCAAGCTGGTTGCTGATGTTGGTATTGTTGGGGCTCCAAATG CGGGGAAAAGTACACTTTTGAGTGTCGTTAGTGCTGCAAAGCCAGAGGTGGCAAATTATCCCTTCACAACCCTGCTTCCC AATCTTGGTGTTGTTTCCTTTGACTATGATTCAACGATGGTAGTGGCAGACCTTCCGGGACTTCTTGAAGGAGCACACCG AGGTTTTGGTTTGGGTCATGAGTTTCTACGACACACTGAGAGGTGTTCTGCCCTGGTAAGCAGGCATTTCTTATCAAGAT GATATCAATGATTTTCCCCTGCTGTATATAGTTAGACATATATAGCTTACATTCTCAGCTCTTTTTTGCTGTCCTTAGTT TTATCTTAATAGTCAGGAAAGACTATGGTTGTTGTTGTTATTGACTTACTGTATACCCATCTTATTCTACCTAAGTCAAT CAATTAGTAAATTGTCAATCCAGACTATTCTGAATCTTTCATTATGTCTGAAAGAACTTTGTTGGATTTTAAATTTGCAA TTGATCCTAAGAATGATTGATCAACTTTTACACTGCTCACCCAGGTAGAATATATTTGTACGATTTCCCCCTATATCAAC CTTCTGTTATTGCTGTATGGTATTGTTAGGCACGCTATTTCCAAATATAACTAATTTGATATCGTTTGCCTGTTTTCCCT TGCTACATCCCTGAAAATTGCTGTTAAAAACAAGCCACTATATTTGGTTTTACTATATTTGGTTTTAGGTACATGTTGTT GATGGTTCATCACCGCAGCCCGATCTTGAGTTTGAGGCAGTTCGTCTAGAGCTGAAGCTGTTTAATCCTGAAATTGCTGA TAAGCCTTTTATTGTTGCTTATAACAAAATGGATCTTCCAGAAGCATATGAAAACTGGGAGTCCTTCAAAGAGAAGTTAC AATCTTGGGGGATCACACCTTTTTGTATGAGTGCTGTCAAAAGCGAAGGTACTCATGAAGTTATCTGTGCTGCTCATGAG CTTTTGCGTAAAAGCAAAGAAGATAAGGAGGAGTATGACTATGAAGGTTATATTTTGCTTTGTACTTATTCTATATATTT TGTCACATTACCAGAATATTCTTTTTTTTTTCTTCTCAAAAAGGCATTTCTTATGAACAAATATGACGTATTCCAGATGG AAGAGATATGGTAAACTTGAACCATGTAGCTGATGCAGTACAGAAGCAGCGAAGCGCATCCATTAGTGATTTTGAGATTT TTCACGAAAGCAATTCAAATGTCTGGCGTGTAGTTGGATCTGGATTGCAACGTTTTATCCAGATGACAAATTGGCGGTAG GTTACAGAGTAAAAACATGATCATGAATACAATTCCTTAATGTGATTTATTGTTTTTAGAGCAATGTGTTATTTTTCGTT ACATTTGAAAAATAATTTGTTGAGGTGTTACTTCTAATCATGTTCAACAAGTAGTGGTTAACTCCTTGTCCTGAATTTAT TCTTCATTGTTAACAGAACATTTCCTACGCTTCCTGAAGCTTTGCATAGATTTTCAAACTTCACATAAAAGATGTAAAAA CAACATAACACTCTTAGATTTGTATGAAACTTCATGGAAGAACCTTTCTGGAATAGTGTGAAAAATATCAAGATTGGAAA ATTCATCCTCCTCTTAATTGATACTTGGTATGTGTTGGGAAAAAAAAAAGCGTTAGGATAAGCATTATGCTTGAAATTGC AACCTCTGTTCTGTTCAGAACTAGTCTCATATAAAGTAGTGGATACTTTTAACAGGTACATGGATTCAGGGAGAAGATTC GAACATGTTCTTGAGGCTTGTGGTGTGTATAAGTCTCTCATGAAACGTGGGATAAAGGAAGGCGACACAGTGATTGTTGG AGAGGTGTGTCTTTTGTTTCTCTTTGGCATTTCTGTTTTGTAATCCTTTCTAGAATGATGAATAAAGGTATGGTTGATTT ACTGTATAAAATTTACTTGTCATTAACTGCTTCACATTCACTTAACATGACTTGTCTTATAAGGCAAAAATGTCAAAAAC AATCTGGACACGTCATCTATCAAGTGCAAAGAGCTTCTTTTTAATATATCTTTCATTAGTTCTTCTACAATATTTTGCTC CATTTCATAATGCATAGCATACTTAATGACCATTTGCTCTGTTACATATCAGATGGAGATGATATGGCATGATTCCAAAG ACAAGTCAGGTGCATCAAGGATGAAGAAGATCTCCACAGATTCAATTAAATGGCCTGAATGGAAGTAACACCTCTCTATT TTGGCGCTTCTAGATCCATGTGTATTGCAACTATGCCATAGGTAAGGAAAACGTTTTTCTCGTATGGTTCTGTCCCCTGC TACAAACATGAAACTTGGCTATAATCTAAATTGAATATAATGCGTTTTACATGACTTCCCCCCTATTACGTAACAGAGAA TATTTTTGTTAGGGAATAAAATAATAATCTCTTAAAAATGTTGGTTATTAACATTGCCTAACAATATTCCTGGAATTTCA ATTTGTAATGGTGCCTAAAACAGCCAAACGGAGAGGTGAGTATGTGACTACCTTTCCTTAGTTCTAACGTACCTTCCCGG TGGCTATGTTATTACTTCATTTTTTTTTATTTGAGTGTATTTATGGATATAAGATCATAATGCCACTGTTATAGTAGTTG TACTTGACAGTATTTTCAAACATTTGTAATTTGCTTTATGTAACTTTGTGAAATATCAAGATTATCAATTAGGTACCCCC TTGAAAATTCTGTTTACTTCTCTTTGATGAGCAAAAGTTCATGCAGGAAGCAAGTTTAGTCAAAATTTGAGAATCTATCT CAAAAAGCATAAGGGTAAAGCAAGCCAATTACATGCTTGTCCTGTGATGGTATGAGGGTGCATTTACAAATTACAATTTC AAATTCTTTTATTCAACTGGAAGCTAAGATCTTCTGCAACTGCTCACAAGTGAATAGGTAAGGTACAATTGAAGATGTGT GCCATCTTACGTTATTTATTGGCTTAAATTGGTTTAACAGATAATTAACCAACAGAAGAGAATATAATTGGTTATGTAAT TGTATATTGATTTGCCATAAACAATCTTGTACTAAGATTGATAATGTCTAATCTGTTTACATTATCTTTGACAGACTGCT CTCATGCAGGTTGAATAATTTGATGAAATTAAGAGTGAAGATCAAATTTAGAGTTTCAAGTTTCACATGAAGTCCCAGTT GTTATATTTTATCTTTAGATAGTTTGTAGCTTGTTTTAGTTGCTGGTAAACCATATTATTATTCTGTATTCCAAGTGTAA CAAAAAAAAAACAATTTATTACTCTTGAGAAGCGGTCCTGATATTGTAGGGAGGAAAAGATGTTAATGATTATAGCTGTA ATCTGCTACTAGCAATGTATTAGACATACTGTGTTTTAGGGGTATAAGAGGCTCTTCTTCATCTATTTACTGTATCAGAG TGTCAAAATGTTAGCAACATACTAGCATGTTTGGATCAACATATTTTTCTTCGGAATCAATTTTGGCATGAACCATGTTT TGAATTGTTTGTGCATATCAATTGTCAGTGACAGTGTCCACCCTGATATGTAATGATTTAAATGTGTTTTTTGTTTATTC A
CDS sequence (LotjaGi6g1v0307800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAATGGCGGCTTCACTCTCACCGTGGTTCTCTCCCACCGCCTTCGCTCGCTCCAACCCTCGCACACCCAACACCAA CAAGCTTTTCCCAGCCTCTAAACTCAAGAAGCAAGCCGCCAAACGCAAGTCCTCGCCGGAACCGGTGGTGCTCTCCGGCG GCGACGCCACTACCTACACTCGTCTTCCTCTCAAGCACGACTACTCATTCCCCTCTACCCCGCTTTCCACTTCCGAAGTC AAACTCTCCGAGTCAATTCACCGCAGCTACAAACAGAAACCAGGAAAAGAAGAAGAGGAAGAGGAAGAGGAAGAAGAGTT CATTGATGGAAGCTTTGAAGGAAATGTTGATTTTGAATCTGAAGGCGAAGAGGAGGAGGAGGAGGAGGAGGAGGGAGAAG AAGAAGAGGAATTCGGCTATTGGGGTGAAGAGGGTGTTGAGAGTAACGATGTTTCGAGTTTGGAGAACGACGAAAATTCG GACGGTGAGGTGAAGGAGAAGGGGGTGCCGGCGGTGATGCGGTGCTTCGACCGGGCTAAGGTATACGCGAAGGCGGGAAA CGGAGGGAATGGGGTGGTGGCGTTCCGCCGGGAGAAGTTCGTGCCGTTAGGGGGGCCGTCGGGTGGAGACGGAGGGAGAG GTGGGAATGTGTTTCTGGAGGTGGATGGGGCAATGAACTCGCTGTTGCCGTTCCGGAACGGCGTGCATTTCAGGGCGGGG AGGGGGTCTCATGGGCAGGGGAGCTTGAAGTGTGGGGCCAAGGGGGAGGATGTAGTGGTGAAGGTGCCGCCGGGGACGGT GGTTAGGGAGGCCGGTGGGGACAGGGTGCTGTTGGAGATGGTGTCTCCCGGACAGAGGGCGTTGTTGTTGCCGGGTGGCC GAGGTGGAAGAGGGAATGCTTCCTTCAAGTCTGGGTCTAATAAGGTTCCCAAGATTGCTGAGAATGGTGAAGAAGGTCCT GAAATGTGGTTGGAGTTGGAACTCAAGCTGGTTGCTGATGTTGGTATTGTTGGGGCTCCAAATGCGGGGAAAAGTACACT TTTGAGTGTCGTTAGTGCTGCAAAGCCAGAGGTGGCAAATTATCCCTTCACAACCCTGCTTCCCAATCTTGGTGTTGTTT CCTTTGACTATGATTCAACGATGGTAGTGGCAGACCTTCCGGGACTTCTTGAAGGAGCACACCGAGGTTTTGGTTTGGGT CATGAGTTTCTACGACACACTGAGAGGTGTTCTGCCCTGGTACATGTTGTTGATGGTTCATCACCGCAGCCCGATCTTGA GTTTGAGGCAGTTCGTCTAGAGCTGAAGCTGTTTAATCCTGAAATTGCTGATAAGCCTTTTATTGTTGCTTATAACAAAA TGGATCTTCCAGAAGCATATGAAAACTGGGAGTCCTTCAAAGAGAAGTTACAATCTTGGGGGATCACACCTTTTTGTATG AGTGCTGTCAAAAGCGAAGGTACTCATGAAGTTATCTGTGCTGCTCATGAGCTTTTGCGTAAAAGCAAAGAAGATAAGGA GGAGTATGACTATGAAGATGGAAGAGATATGGTAAACTTGAACCATGTAGCTGATGCAGTACAGAAGCAGCGAAGCGCAT CCATTAGTGATTTTGAGATTTTTCACGAAAGCAATTCAAATGTCTGGCGTGTAGTTGGATCTGGATTGCAACGTTTTATC CAGATGACAAATTGGCGGTACATGGATTCAGGGAGAAGATTCGAACATGTTCTTGAGGCTTGTGGTGTGTATAAGTCTCT CATGAAACGTGGGATAAAGGAAGGCGACACAGTGATTGTTGGAGAGATGGAGATGATATGGCATGATTCCAAAGACAAGT CAGGTGCATCAAGGATGAAGAAGATCTCCACAGATTCAATTAAATGGCCTGAATGGAAGTAA
Protein sequence (LotjaGi6g1v0307800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKMAASLSPWFSPTAFARSNPRTPNTNKLFPASKLKKQAAKRKSSPEPVVLSGGDATTYTRLPLKHDYSFPSTPLSTSEV KLSESIHRSYKQKPGKEEEEEEEEEEFIDGSFEGNVDFESEGEEEEEEEEEGEEEEEFGYWGEEGVESNDVSSLENDENS DGEVKEKGVPAVMRCFDRAKVYAKAGNGGNGVVAFRREKFVPLGGPSGGDGGRGGNVFLEVDGAMNSLLPFRNGVHFRAG RGSHGQGSLKCGAKGEDVVVKVPPGTVVREAGGDRVLLEMVSPGQRALLLPGGRGGRGNASFKSGSNKVPKIAENGEEGP EMWLELELKLVADVGIVGAPNAGKSTLLSVVSAAKPEVANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLEGAHRGFGLG HEFLRHTERCSALVHVVDGSSPQPDLEFEAVRLELKLFNPEIADKPFIVAYNKMDLPEAYENWESFKEKLQSWGITPFCM SAVKSEGTHEVICAAHELLRKSKEDKEEYDYEDGRDMVNLNHVADAVQKQRSASISDFEIFHESNSNVWRVVGSGLQRFI QMTNWRYMDSGRRFEHVLEACGVYKSLMKRGIKEGDTVIVGEMEMIWHDSKDKSGASRMKKISTDSIKWPEWK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
SignalP_GRAM_POSITIVE | 1 | 17 | 17 | - | – | |
Phobius | 1 | 3 | 3 | - | – | |
Phobius | 1 | 17 | 17 | - | – | |
MobiDBLite | 1 | 165 | 165 | - | – | |
Phobius | 4 | 12 | 9 | - | – | |
MobiDBLite | 12 | 32 | 21 | - | – | |
Phobius | 13 | 17 | 5 | - | – | |
Phobius | 18 | 633 | 616 | - | – | |
PANTHER | 97 | 593 | 497 | 5.9E-182 | – | |
PANTHER | 97 | 593 | 497 | 5.9E-182 | – | |
MobiDBLite | 98 | 143 | 46 | - | – | |
Coils | 115 | 135 | 21 | - | – | |
Gene3D | 171 | 330 | 160 | 3.2E-52 | ||
ProSiteProfiles | 173 | 331 | 159 | 67.403 | – | |
Hamap | 174 | 500 | 327 | 43.195 | ||
TIGRFAM | 176 | 498 | 323 | 5.5E-119 | ||
SUPERFAMILY | 176 | 330 | 155 | 3.79E-47 | ||
Pfam | 177 | 330 | 154 | 3.1E-51 | ||
MobiDBLite | 289 | 314 | 26 | - | – | |
Gene3D | 331 | 512 | 182 | 1.6E-49 | – | |
CDD | 332 | 499 | 168 | 1.32284E-84 | ||
ProSiteProfiles | 332 | 500 | 169 | 68.127 | ||
Pfam | 333 | 453 | 121 | 5.7E-23 | ||
SUPERFAMILY | 333 | 519 | 187 | 1.13E-44 | ||
PRINTS | 334 | 354 | 21 | 6.3E-34 | ||
PRINTS | 355 | 373 | 19 | 6.3E-34 | ||
PRINTS | 383 | 398 | 16 | 6.3E-34 | ||
ProSitePatterns | 385 | 398 | 14 | - | ||
PRINTS | 400 | 418 | 19 | 6.3E-34 | ||
ProSiteProfiles | 530 | 609 | 80 | 22.899 | – | |
Gene3D | 537 | 609 | 73 | 2.9E-16 | ||
SUPERFAMILY | 537 | 609 | 73 | 1.19E-18 | ||
TIGRFAM | 538 | 607 | 70 | 3.1E-15 | ||
Pfam | 538 | 607 | 70 | 5.6E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
Molecular function | Magnesium ion binding | Interacting selectively and non-covalently with magnesium (Mg) ions. | ||
Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi6g1v0307800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…