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NusB family
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: ribosomal RNA small subunit methyltransferase B-like [Cicer arietinum] gi|502099597|ref|XP_004491518.1| | 20 | ||
| – | Antitermination NusB domain-containing protein isoform 1 [Theobroma cacao] gi|508784391|gb|EOY31647.1| | 12 | ||
| – | Ribosomal RNA small subunit methyltransferase B; TAIR: AT3G13180.1 NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein; Swiss-Prot: sp|P94464|RSMB_BACSU Probable ribosomal RNA small subunit methyltransferase B; TrEMBL-Plants: tr|G7KEH7|G7KEH7_MEDTR Ribosomal RNA small subunit methyltransferase B; Found in the gene: LotjaGi1g1v0015100 | 21 | ||
| – | Ribosomal RNA small subunit methyltransferase B; TAIR: AT3G13180.1 NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein; Swiss-Prot: sp|P94464|RSMB_BACSU Probable ribosomal RNA small subunit methyltransferase B; TrEMBL-Plants: tr|I1JJK1|I1JJK1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0015100 | 20 | ||
| – | N utilization substance protein B like; TAIR: AT4G26370.1 antitermination NusB domain-containing protein; Swiss-Prot: sp|Q8DKS0|NUSB_THEEB N utilization substance protein B homolog; TrEMBL-Plants: tr|I3SVI4|I3SVI4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0086500 | 13 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| SignalP-TM | SignalP_GRAM_NEGATIVE | 1 | 20.00 |