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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0322239 |
| Transcript ID | Lj0g3v0322239.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: zinc finger Ran-binding domain-containing protein 3-like [Glycine max] gi|356519100|ref|XP_003528212.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 14 | 328 | 315 | 3.00E-85 | – | |
| PANTHER | 14 | 328 | 315 | 3.00E-85 | – | |
| SUPERFAMILY | 147 | 317 | 171 | 1.64E-31 | ||
| ProSiteProfiles | 157 | 311 | 155 | 11.575 | ||
| Pfam | 160 | 265 | 106 | 3.00E-10 | ||
| Gene3D | 161 | 299 | 139 | 8.00E-12 | ||
| CDD | 170 | 275 | 106 | 2.90E-08 | – | |
| SMART | 182 | 265 | 84 | 2.90E-09 | ||
| MobiDBLite | 329 | 374 | 46 | – | – | |
| PANTHER | 354 | 377 | 24 | 3.00E-85 | – | |
| PANTHER | 354 | 377 | 24 | 3.00E-85 | – | |
| MobiDBLite | 420 | 440 | 21 | – | – | |
| CDD | 710 | 750 | 41 | 1.23E-04 | – | |
| Pfam | 716 | 747 | 32 | 8.50E-07 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | Endonuclease activity | Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks. |
Expression pattern of Lj0g3v0322239.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0322239.1, powered by CORGI.
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