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PF07500

Source: Pfam

Description

Transcription factor S-II (TFIIS), central domain

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006351
Biological process Transcription, DNA-templated The cellular synthesis of RNA on a template of DNA.
Subterm of
Part of

Associated Lotus transcripts 11

Transcript Name Description Predicted domains Domain count
Lj1g3v1134040.1
– PREDICTED: transcription elongation factor A protein 3-like [Cicer arietinum] gi|502136750|ref|XP_004502818.1|
Domains
29
Lj1g3v1134050.1
– PREDICTED: transcription elongation factor A protein 3-like [Cicer arietinum] gi|502136750|ref|XP_004502818.1|
Domains
21
Lj1g3v1931370.1
– Transcription elongation factor A protein [Medicago truncatula] gi|357466369|ref|XP_003603469.1|
Domains
11
Lj2g3v2017700.1
– BAH and coiled-coil domain-containing protein [Medicago truncatula] gi|357481593|ref|XP_003611082.1|
Domains
12
Lj4g3v2962330.1
– BAH and coiled-coil domain-containing protein [Medicago truncatula] gi|357481593|ref|XP_003611082.1|
Domains
15
Lj4g3v2962330.2
– BAH and coiled-coil domain-containing protein [Medicago truncatula] gi|357481593|ref|XP_003611082.1|
Domains
15
LotjaGi1g1v0305500.1
– Transcription elongation factor; TAIR: AT2G38560.1 transcript elongation factor IIS; Swiss-Prot: sp|Q9ZVH8|RDO2_ARATH Transcription elongation factor TFIIS; TrEMBL-Plants: tr|I1JYC9|I1JYC9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0305500
Domains
32
LotjaGi1g1v0305500.2
– Transcription elongation factor; TAIR: AT2G38560.1 transcript elongation factor IIS; Swiss-Prot: sp|Q9ZVH8|RDO2_ARATH Transcription elongation factor TFIIS; TrEMBL-Plants: tr|I1JYC9|I1JYC9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0305500
Domains
32
LotjaGi1g1v0389600.1
– SPOC domain/transcription elongation factor S-II, putative; TAIR: AT5G11430.1 SPOC domain / Transcription elongation factor S-II protein; Swiss-Prot: sp|Q92576|PHF3_HUMAN PHD finger protein 3; TrEMBL-Plants: tr|I1K905|I1K905_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0389600
Domains
12
LotjaGi2g1v0434400.1
– Bromo-adjacent-like (BAH) domain protein; TAIR: AT4G11560.1 bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|G7KC24|G7KC24_MEDTR Bromo-adjacent-like (BAH) domain protein; Found in the gene: LotjaGi2g1v0434400
Domains
18
LotjaGi4g1v0425900.1
– Bromo-adjacent-like (BAH) domain protein; TAIR: AT4G11560.1 bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|A0A0S3QXP3|A0A0S3QXP3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0425900
Domains
18

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 9.09