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PS01082

Source: ProSitePatterns

Description

Ribosomal protein L7Ae signature.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0042254
Biological process Ribosome biogenesis A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis.
Subterm of
GO:1990904
Cellular component Ribonucleoprotein complex A macromolecular complex containing both protein and RNA molecules.
Subterm of

Associated Lotus transcripts 9

Transcript Name Description Predicted domains Domain count
Lj0g3v0120989.1
– PREDICTED: NHP2-like protein 1-like [Cicer arietinum] gi|502087441|ref|XP_004488534.1|
Domains
13
Lj1g3v0672680.1
– PREDICTED: NHP2-like protein 1-like [Cicer arietinum] gi|502087441|ref|XP_004488534.1|
Domains
14
LotjaGi1g1v0200100.1
– Ribosomal protein l7ae; TAIR: AT4G22380.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; Swiss-Prot: sp|Q5XH16|NH2L1_XENLA NHP2-like protein 1; TrEMBL-Plants: tr|I3SXG0|I3SXG0_MEDTR Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; Found in the gene: LotjaGi1g1v0200100
Domains
14
LotjaGi2g1v0429700.1
– 60S ribosomal protein L7a; TAIR: AT3G62870.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; Swiss-Prot: sp|P35685|RL7A1_ORYSJ 60S ribosomal protein L7a-1; TrEMBL-Plants: tr|I3SHC8|I3SHC8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0429700
Domains
16
LotjaGi2g1v0429700.2
– 60S ribosomal protein L7a; TAIR: AT2G47610.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; Swiss-Prot: sp|P49692|RL7A1_ARATH 60S ribosomal protein L7a-1; TrEMBL-Plants: tr|I3SHC8|I3SHC8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0429700
Domains
15
LotjaGi3g1v0525500.1
– 60S ribosomal protein L7a; TAIR: AT3G62870.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; Swiss-Prot: sp|P35685|RL7A1_ORYSJ 60S ribosomal protein L7a-1; TrEMBL-Plants: tr|I3SHC8|I3SHC8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0525500
Domains
16
LotjaGi3g1v0525800.1
– 60S ribosomal protein L7a; TAIR: AT3G62870.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; Swiss-Prot: sp|P35685|RL7A1_ORYSJ 60S ribosomal protein L7a-1; TrEMBL-Plants: tr|I3SHC8|I3SHC8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0525800
Domains
16
LotjaGi6g1v0162200.1
– Ribosomal protein l7ae; TAIR: AT5G20160.2 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; Swiss-Prot: sp|Q5XH16|NH2L1_XENLA NHP2-like protein 1; TrEMBL-Plants: tr|I3T354|I3T354_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0162200
Domains
14
LotjaGi6g1v0162200.2
– Ribosomal protein l7ae; TAIR: AT5G20160.2 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; Swiss-Prot: sp|Q5XH16|NH2L1_XENLA NHP2-like protein 1; TrEMBL-Plants: tr|I3T354|I3T354_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0162200
Domains
14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
SSF55315 SUPERFAMILY 1 11.11