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PS51358

Source: ProSiteProfiles

Description

Nop domain profile.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 15

Transcript Name Description Predicted domains Domain count
Lj1g3v3765010.1
– PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like isoform X2 [Cicer arietinum] gi|502100538|ref|XP_004491744.1|
Domains
11
Lj2g3v0663770.1
– PREDICTED: nucleolar protein 56-like, partial [Glycine max] gi|356529505|ref|XP_003533331.1|
Domains
8
Lj2g3v0663770.3
– PREDICTED: nucleolar protein 56-like [Glycine max] gi|356563188|ref|XP_003549846.1|
Domains
8
Lj3g3v2515480.1
– PREDICTED: nucleolar protein 56-like [Glycine max] gi|356563188|ref|XP_003549846.1|
Domains
9
Lj3g3v3375700.1
– SAR DNA-binding protein-like protein [Lotus japonicus] gi|33945887|emb|CAE45597.1|
Domains
12
LotjaGi1g1v0618800.1
– U4/U6 small nuclear ribonucleoprotein Prp31; TAIR: AT1G60170.1 pre-mRNA processing ribonucleoprotein binding region-containing protein; Swiss-Prot: sp|Q8RXN6|PRP31_ARATH U4/U6 small nuclear ribonucleoprotein Prp31 homolog; TrEMBL-Plants: tr|A0A0S3TBB0|A0A0S3TBB0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0618800
Domains
17
LotjaGi1g1v0618800.3
– U4/U6 small nuclear ribonucleoprotein Prp31; TAIR: AT1G60170.1 pre-mRNA processing ribonucleoprotein binding region-containing protein; Swiss-Prot: sp|Q8RXN6|PRP31_ARATH U4/U6 small nuclear ribonucleoprotein Prp31 homolog; TrEMBL-Plants: tr|A0A0S3TBB0|A0A0S3TBB0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0618800
Domains
17
LotjaGi1g1v0618800.4
– U4/U6 small nuclear ribonucleoprotein Prp31; TAIR: AT1G60170.1 pre-mRNA processing ribonucleoprotein binding region-containing protein; Swiss-Prot: sp|Q8RXN6|PRP31_ARATH U4/U6 small nuclear ribonucleoprotein Prp31 homolog; TrEMBL-Plants: tr|A0A0S3TBB0|A0A0S3TBB0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0618800
Domains
17
LotjaGi2g1v0196600_LC.1
– Nucleolar protein; TAIR: AT3G12860.1 NOP56-like pre RNA processing ribonucleoprotein; Swiss-Prot: sp|Q3SZ63|NOP56_BOVIN Nucleolar protein 56; TrEMBL-Plants: tr|I1KJ56|I1KJ56_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0196600_LC
Domains
11
LotjaGi2g1v0196600_LC.3
– Nucleolar protein; TAIR: AT3G12860.1 NOP56-like pre RNA processing ribonucleoprotein; Swiss-Prot: sp|Q3SZ63|NOP56_BOVIN Nucleolar protein 56; TrEMBL-Plants: tr|I1KJ56|I1KJ56_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0196600_LC
Domains
11
LotjaGi2g1v0196600_LC.5
– Nucleolar protein; TAIR: AT3G12860.1 NOP56-like pre RNA processing ribonucleoprotein; Swiss-Prot: sp|O00567|NOP56_HUMAN Nucleolar protein 56; TrEMBL-Plants: tr|I1KJ56|I1KJ56_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0196600_LC
Domains
11
LotjaGi2g1v0196600_LC.7
– Nucleolar protein; TAIR: AT3G12860.1 NOP56-like pre RNA processing ribonucleoprotein; Swiss-Prot: sp|O00567|NOP56_HUMAN Nucleolar protein 56; TrEMBL-Plants: tr|I1KJ56|I1KJ56_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0196600_LC
Domains
11
LotjaGi3g1v0511600.1
– Nucleolar protein; TAIR: AT3G05060.1 NOP56-like pre RNA processing ribonucleoprotein; Swiss-Prot: sp|Q9MAB3|NOP5B_ARATH Probable nucleolar protein 5-2; TrEMBL-Plants: tr|Q70I27|Q70I27_LOTJA SAR DNA-binding protein-like protein; Found in the gene: LotjaGi3g1v0511600
Domains
18
LotjaGi3g1v0511600.2
– Nucleolar protein; TAIR: AT3G05060.1 NOP56-like pre RNA processing ribonucleoprotein; Swiss-Prot: sp|Q9MAB3|NOP5B_ARATH Probable nucleolar protein 5-2; TrEMBL-Plants: tr|Q70I27|Q70I27_LOTJA SAR DNA-binding protein-like protein; Found in the gene: LotjaGi3g1v0511600
Domains
18
LotjaGi4g1v0223200.1
– Nucleolar family protein; TAIR: AT1G56110.1 NOP56-like pre RNA processing ribonucleoprotein; Swiss-Prot: sp|O94514|NOP56_SCHPO Nucleolar protein 56; TrEMBL-Plants: tr|I3S8I2|I3S8I2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0223200
Domains
17

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 6.67