Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PTHR10335:SF12

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 5

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi1g1v0018400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RRNA 2'-O-methyltransferase fibrillarin 2; TAIR: AT4G25630.1 fibrillarin 2; Swiss-Prot: sp\|Q94AH9\|MD36A_ARATH Mediator of RNA polymerase II transcription subunit 36a; TrEMBL-Plants: tr\|I3SKZ0\|I3SKZ0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0018400	Domains G3DSA:3.30.200.20 G3DSA:3.40.50.150 IPR000692 IPR020813 IPR029063 MF_00351 PF01269 PIRSF006540 PR00052 PS00566 PTHR10335 PTHR10335:SF12 SM01206 SSF53335 mobidb-lite	15
LotjaGi1g1v0018400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RRNA 2'-O-methyltransferase fibrillarin 2; TAIR: AT4G25630.1 fibrillarin 2; Swiss-Prot: sp\|Q94AH9\|MD36A_ARATH Mediator of RNA polymerase II transcription subunit 36a; TrEMBL-Plants: tr\|I3SKZ0\|I3SKZ0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0018400	Domains G3DSA:3.30.200.20 G3DSA:3.40.50.150 IPR000692 IPR020813 IPR029063 MF_00351 PF01269 PIRSF006540 PR00052 PS00566 PTHR10335 PTHR10335:SF12 SM01206 SSF53335	14
LotjaGi1g1v0018400.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RRNA 2'-O-methyltransferase fibrillarin 2; TAIR: AT4G25630.1 fibrillarin 2; Swiss-Prot: sp\|Q94AH9\|MD36A_ARATH Mediator of RNA polymerase II transcription subunit 36a; TrEMBL-Plants: tr\|I3SKZ0\|I3SKZ0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0018400	Domains G3DSA:3.30.200.20 G3DSA:3.40.50.150 IPR000692 IPR020813 IPR029063 MF_00351 PF01269 PIRSF006540 PR00052 PS00566 PTHR10335 PTHR10335:SF12 SM01206 SSF53335	14
LotjaGi2g1v0122000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RRNA 2'-O-methyltransferase fibrillarin 2; TAIR: AT4G25630.1 fibrillarin 2; Swiss-Prot: sp\|Q94AH9\|MD36A_ARATH Mediator of RNA polymerase II transcription subunit 36a; TrEMBL-Plants: tr\|I3SKZ0\|I3SKZ0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0122000	Domains G3DSA:3.30.200.20 G3DSA:3.40.50.150 IPR000692 IPR020813 IPR029063 MF_00351 PF01269 PIRSF006540 PR00052 PS00566 PTHR10335 PTHR10335:SF12 SM01206 SSF53335 mobidb-lite	15
LotjaGi5g1v0041200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RRNA 2'-O-methyltransferase fibrillarin 2; TAIR: AT5G52470.1 fibrillarin 1; Swiss-Prot: sp\|Q9FEF8\|MD36B_ARATH Probable mediator of RNA polymerase II transcription subunit 36b; TrEMBL-Plants: tr\|A0A072U8T6\|A0A072U8T6_MEDTR Mediator of RNA polymerase II transcription subunit 36a; Found in the gene: LotjaGi5g1v0041200	Domains G3DSA:3.30.200.20 G3DSA:3.40.50.150 IPR000692 IPR029063 PF01269 PIRSF006540 PR00052 PTHR10335 PTHR10335:SF12 SM01206 SSF53335	11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
SSF53335	SUPERFAMILY	1	20.00