Domain Predictions — View

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PTHR12416:SF2

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 8

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0324239.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: rRNA-processing protein FCF1 homolog [Glycine max] gi\|356543662\|ref\|XP_003540279.1\|	Domains G3DSA:3.40.50.1010 IPR002716 IPR006984 IPR029060 PF04900 PTHR12416 PTHR12416:SF2 SM00670 SSF88723 cd09864	10
Lj1g3v5021220.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: rRNA-processing protein FCF1 homolog [Glycine max] gi\|356543662\|ref\|XP_003540279.1\|	Domains G3DSA:3.40.50.1010 IPR002716 IPR006984 IPR029060 PF04900 PTHR12416 PTHR12416:SF2 SM00670 SSF88723 cd09864	10
LotjaGi1g1v0788500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RRNA-processing protein FCF1-like protein; TAIR: AT2G46230.1 PIN domain-like family protein; Swiss-Prot: sp\|Q32PD0\|FCF1_BOVIN rRNA-processing protein FCF1 homolog; TrEMBL-Plants: tr\|I3T9S6\|I3T9S6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0788500	Domains G3DSA:3.40.50.1010 IPR002716 IPR006984 IPR029060 NON_CYTOPLASMIC_DOMAIN PF04900 PTHR12416 PTHR12416:SF2 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00670 SSF88723 cd09864	15
LotjaGi1g1v0788500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RRNA-processing protein FCF1-like protein; TAIR: AT2G46230.1 PIN domain-like family protein; Swiss-Prot: sp\|Q32PD0\|FCF1_BOVIN rRNA-processing protein FCF1 homolog; TrEMBL-Plants: tr\|I3T9S6\|I3T9S6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0788500	Domains G3DSA:3.40.50.1010 IPR002716 IPR006984 IPR029060 PF04900 PTHR12416 PTHR12416:SF2 SM00670 SSF88723 cd09864	10
LotjaGi3g1v0178700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RRNA-processing protein FCF1 like; TAIR: AT2G46230.1 PIN domain-like family protein; Swiss-Prot: sp\|Q32PD0\|FCF1_BOVIN rRNA-processing protein FCF1 homolog; TrEMBL-Plants: tr\|I3T9S6\|I3T9S6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0178700	Domains G3DSA:3.40.50.1010 IPR002716 IPR006984 IPR029060 PF04900 PTHR12416 PTHR12416:SF2 SM00670 SSF88723 cd09864	10
LotjaGi3g1v0178700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RRNA-processing protein FCF1 like; TAIR: AT2G46230.1 PIN domain-like family protein; Swiss-Prot: sp\|Q32PD0\|FCF1_BOVIN rRNA-processing protein FCF1 homolog; TrEMBL-Plants: tr\|I3T9S6\|I3T9S6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0178700	Domains G3DSA:3.40.50.1010 IPR002716 IPR006984 IPR029060 NON_CYTOPLASMIC_DOMAIN PF04900 PTHR12416 PTHR12416:SF2 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00670 SSF88723 cd09864	15
LotjaGi3g1v0178700.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RRNA-processing protein FCF1-like protein; TAIR: AT1G26530.1 PIN domain-like family protein; Swiss-Prot: sp\|Q32PD0\|FCF1_BOVIN rRNA-processing protein FCF1 homolog; TrEMBL-Plants: tr\|I3T9S6\|I3T9S6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0178700	Domains G3DSA:3.40.50.1010 IPR006984 IPR029060 PF04900 PTHR12416 PTHR12416:SF2 SSF88723 cd09864	8
LotjaGi3g1v0178700.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RRNA-processing protein FCF1 like; TAIR: AT2G46230.1 PIN domain-like family protein; Swiss-Prot: sp\|Q32PD0\|FCF1_BOVIN rRNA-processing protein FCF1 homolog; TrEMBL-Plants: tr\|A0A151TXS1\|A0A151TXS1_CAJCA rRNA-processing protein FCF1 isogeny; Found in the gene: LotjaGi3g1v0178700	Domains G3DSA:3.40.50.1010 IPR002716 IPR006984 IPR029060 PF04900 PTHR12416 PTHR12416:SF2 SM00670 SSF88723 cd09864	10

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd09864	CDD	1	12.50