Domain Predictions — View

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PTHR13844

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 24

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0086399.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: SWI/SNF complex component SNF12 homolog [Glycine max] gi\|356511807\|ref\|XP_003524614.1\|	Domains G3DSA:1.10.245.10 IPR003121 IPR019835 PF02201 PTHR13844 PTHR13844:SF13 SM00151 SSF47592 mobidb-lite	9
Lj0g3v0320079.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chromatin remodeling complex subunit [Medicago truncatula] gi\|357463633\|ref\|XP_003602098.1\|	Domains G3DSA:1.10.245.10 IPR003121 IPR019835 PF02201 PTHR13844 PTHR13844:SF13 SM00151 SSF47592 mobidb-lite	9
Lj0g3v0320089.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: SWI/SNF complex component SNF12 homolog [Glycine max] gi\|356507353\|ref\|XP_003522432.1\|	Domains PTHR13844 PTHR13844:SF13 mobidb-lite	4
Lj1g3v0050930.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: upstream activation factor subunit UAF30-like [Cicer arietinum] gi\|502158846\|ref\|XP_004511300.1\|	Domains G3DSA:1.10.245.10 IPR003121 IPR019835 NON_CYTOPLASMIC_DOMAIN PF02201 PTHR13844 PTHR13844:SF8 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00151 SSF47592 SignalP-TM_GRAM_POSITIVE	14
Lj2g3v1831970.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: upstream activation factor subunit spp27-like isoform 1 [Glycine max] gi\|356496858\|ref\|XP_003517282.1\|	Domains G3DSA:1.10.10.60 G3DSA:1.10.245.10 IPR003121 IPR009057 IPR014876 IPR019835 PF02201 PF08766 PTHR13844 PTHR13844:SF4 SM00151 SSF109715 SSF47592 mobidb-lite	14
Lj2g3v2538590.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Upstream activation factor subunit UAF30 [Medicago truncatula] gi\|357459823\|ref\|XP_003600192.1\|	Domains G3DSA:1.10.10.60 G3DSA:1.10.245.10 IPR003121 IPR009057 IPR014876 IPR019835 PF02201 PF08766 PTHR13844 PTHR13844:SF14 SM00151 SSF47592 mobidb-lite	13
Lj4g3v0120100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: upstream activation factor subunit UAF30-like [Fragaria vesca subsp]. vesca] gi\|470115751\|ref\|XP_004294055.1\|	Domains G3DSA:1.10.10.60 G3DSA:1.10.245.10 IPR003121 IPR009057 IPR014876 IPR019835 PF02201 PF08766 PTHR13844 PTHR13844:SF10 SM00151 SSF109715 SSF47592 mobidb-lite	14
Lj4g3v0120100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	SWIB complex BAF60b domain-containing protein [Arabidopsis thaliana] gi\|18415906\|ref\|NP_567661.1\|	Domains G3DSA:1.10.10.60 G3DSA:1.10.245.10 IPR003121 IPR009057 IPR014876 IPR019835 PF02201 PF08766 PTHR13844 PTHR13844:SF10 SM00151 SSF109715 SSF47592 mobidb-lite	14
Lj4g3v1388320.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: SWI/SNF complex component SNF12 homolog [Cicer arietinum] gi\|502176194\|ref\|XP_004515819.1\|	Domains Coil G3DSA:1.10.245.10 IPR003121 IPR019835 PF02201 PTHR13844 PTHR13844:SF13 SM00151 SSF47592 mobidb-lite	10
Lj6g3v0815560.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Upstream activation factor subunit UAF30 [Medicago truncatula] gi\|357459823\|ref\|XP_003600192.1\|	Domains G3DSA:1.10.10.60 G3DSA:1.10.245.10 IPR003121 IPR009057 IPR014876 IPR019835 PF02201 PF08766 PTHR13844 PTHR13844:SF14 SM00151 SSF47592 mobidb-lite	13
Lj6g3v0820200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: upstream activation factor subunit UAF30-like [Fragaria vesca subsp]. vesca] gi\|470119496\|ref\|XP_004295850.1\|	Domains G3DSA:1.10.245.10 IPR003121 IPR019835 PF02201 PTHR13844 PTHR13844:SF9 SM00151 SSF47592	8
LotjaGi1g1v0238200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	SWI/SNF complex component SNF12 like; TAIR: AT5G14170.1 SWIB/MDM2 domain superfamily protein; Swiss-Prot: sp\|Q9FMT4\|SNF12_ARATH SWI/SNF complex component SNF12 homolog; TrEMBL-Plants: tr\|G7J5J5\|G7J5J5_MEDTR Chromatin remodeling complex subunit; Found in the gene: LotjaGi1g1v0238200	Domains G3DSA:1.10.245.10 IPR003121 IPR019835 IPR036885 PF02201 PTHR13844 PTHR13844:SF50 SM00151 SSF47592 cd10568 mobidb-lite	11
LotjaGi1g1v0238200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	SWI/SNF complex component SNF12 like; TAIR: AT5G14170.1 SWIB/MDM2 domain superfamily protein; Swiss-Prot: sp\|Q9FMT4\|SNF12_ARATH SWI/SNF complex component SNF12 homolog; TrEMBL-Plants: tr\|G7J5J5\|G7J5J5_MEDTR Chromatin remodeling complex subunit; Found in the gene: LotjaGi1g1v0238200	Domains G3DSA:1.10.245.10 IPR003121 IPR019835 IPR036885 PF02201 PTHR13844 PTHR13844:SF50 SM00151 SSF47592 cd10568 mobidb-lite	11
LotjaGi2g1v0087800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	SWI/SNF complex component SNF12 like; TAIR: AT5G14170.1 SWIB/MDM2 domain superfamily protein; Swiss-Prot: sp\|Q9FMT4\|SNF12_ARATH SWI/SNF complex component SNF12 homolog; TrEMBL-Plants: tr\|K7KP05\|K7KP05_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0087800	Domains G3DSA:1.10.245.10 IPR003121 IPR019835 IPR036885 PF02201 PTHR13844 PTHR13844:SF41 SM00151 SSF47592 cd10568 mobidb-lite	11
LotjaGi2g1v0349400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Upstream activation factor subunit spp27; TAIR: AT2G35605.1 SWIB/MDM2 domain superfamily protein; Swiss-Prot: sp\|Q9SIV5\|C3H19_ARATH Zinc finger CCCH domain-containing protein 19; TrEMBL-Plants: tr\|I3SIS2\|I3SIS2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0349400	Domains G3DSA:1.10.245.10 IPR003121 IPR036885 PF02201 PTHR13844 PTHR13844:SF42 SSF47592 SignalP-TM mobidb-lite	9
LotjaGi2g1v0349400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Upstream activation factor subunit spp27; TAIR: AT2G35605.1 SWIB/MDM2 domain superfamily protein; Swiss-Prot: sp\|Q9SIV5\|C3H19_ARATH Zinc finger CCCH domain-containing protein 19; TrEMBL-Plants: tr\|I3SIS2\|I3SIS2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0349400	Domains G3DSA:1.10.245.10 IPR003121 IPR036885 PF02201 PTHR13844 PTHR13844:SF42 SSF47592 SignalP-TM mobidb-lite	9
LotjaGi2g1v0349400.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Upstream activation factor subunit spp27; TAIR: AT2G35605.1 SWIB/MDM2 domain superfamily protein; Swiss-Prot: sp\|Q08747\|UAF30_YEAST Upstream activation factor subunit UAF30; TrEMBL-Plants: tr\|I1LIF9\|I1LIF9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0349400	Domains G3DSA:1.10.245.10 IPR003121 IPR019835 IPR036885 NON_CYTOPLASMIC_DOMAIN PF02201 PTHR13844 PTHR13844:SF48 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00151 SSF47592 SignalP-TM cd10567 mobidb-lite	17
LotjaGi2g1v0398300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Upstream activation factor subunit spp27; TAIR: AT3G19080.1 SWIB complex BAF60b domain-containing protein; Swiss-Prot: sp\|O74503\|UAF30_SCHPO Upstream activation factor subunit spp27; TrEMBL-Plants: tr\|I1J943\|I1J943_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0398300	Domains G3DSA:1.10.245.10 IPR003121 IPR014876 IPR019835 IPR036885 PF02201 PF08766 PTHR13844 PTHR13844:SF53 SM00151 SSF109715 SSF47592 cd10567 mobidb-lite	14
LotjaGi2g1v0460900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Upstream activation factor subunit spp27; TAIR: AT2G14880.1 SWIB/MDM2 domain superfamily protein; Swiss-Prot: sp\|O74503\|UAF30_SCHPO Upstream activation factor subunit spp27; TrEMBL-Plants: tr\|I3TA97\|I3TA97_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0460900	Domains G3DSA:1.10.245.10 IPR003121 IPR019835 IPR036885 NON_CYTOPLASMIC_DOMAIN PF02201 PTHR13844 PTHR13844:SF8 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00151 SSF47592 SignalP-TM cd10567	16
LotjaGi4g1v0008600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Upstream activation factor subunit spp27; TAIR: AT4G22360.1 SWIB complex BAF60b domain-containing protein; Swiss-Prot: sp\|O74503\|UAF30_SCHPO Upstream activation factor subunit spp27; TrEMBL-Plants: tr\|I1MR08\|I1MR08_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0008600	Domains G3DSA:1.10.245.10 IPR003121 IPR014876 IPR019835 IPR036885 PF02201 PF08766 PTHR13844 PTHR13844:SF54 SM00151 SSF109715 SSF47592 cd10567 mobidb-lite	14
LotjaGi4g1v0008600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Upstream activation factor subunit spp27; TAIR: AT4G22360.1 SWIB complex BAF60b domain-containing protein; Swiss-Prot: sp\|O74503\|UAF30_SCHPO Upstream activation factor subunit spp27; TrEMBL-Plants: tr\|I1MR08\|I1MR08_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0008600	Domains G3DSA:1.10.245.10 IPR003121 IPR014876 IPR019835 IPR036885 PF02201 PF08766 PTHR13844 PTHR13844:SF54 SM00151 SSF109715 SSF47592 cd10567	13
LotjaGi4g1v0222400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	SWI/SNF complex component SNF12 like; TAIR: AT5G14170.1 SWIB/MDM2 domain superfamily protein; Swiss-Prot: sp\|Q9FMT4\|SNF12_ARATH SWI/SNF complex component SNF12 homolog; TrEMBL-Plants: tr\|A0A1J7HXV2\|A0A1J7HXV2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0222400	Domains Coil G3DSA:1.10.245.10 IPR003121 IPR019835 IPR036885 PF02201 PTHR13844 PTHR13844:SF41 SM00151 SSF47592 cd10568 mobidb-lite	12
LotjaGi6g1v0151600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Upstream activation factor subunit spp27; TAIR: AT4G22360.1 SWIB complex BAF60b domain-containing protein; Swiss-Prot: sp\|O74503\|UAF30_SCHPO Upstream activation factor subunit spp27; TrEMBL-Plants: tr\|I1KYE8\|I1KYE8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0151600	Domains G3DSA:1.10.245.10 IPR003121 IPR014876 IPR019835 IPR036885 PF02201 PF08766 PTHR13844 PTHR13844:SF54 SM00151 SSF47592 cd10567 mobidb-lite	13
LotjaGi6g1v0154300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Upstream activation factor subunit spp27; TAIR: AT4G26810.1 SWIB/MDM2 domain superfamily protein; Swiss-Prot: sp\|Q08747\|UAF30_YEAST Upstream activation factor subunit UAF30; TrEMBL-Plants: tr\|A0A1J7HL65\|A0A1J7HL65_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0154300	Domains G3DSA:1.10.245.10 IPR003121 IPR019835 IPR036885 PF02201 PTHR13844 PTHR13844:SF45 SM00151 SSF47592 cd10567	10

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd10567	CDD	1	4.17