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G3DSA:1.10.245.10

Source: Gene3D

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Associated Lotus transcripts 40

Transcript Name Description Predicted domains Domain count
Lj0g3v0086399.1
– PREDICTED: SWI/SNF complex component SNF12 homolog [Glycine max] gi|356511807|ref|XP_003524614.1|
Domains
9
Lj0g3v0127099.1
– PREDICTED: zinc finger CCCH domain-containing protein 44-like [Glycine max] gi|356495372|ref|XP_003516552.1|
Domains
26
Lj0g3v0127099.2
– PREDICTED: zinc finger CCCH domain-containing protein 44-like [Cicer arietinum] gi|502161282|ref|XP_004512106.1|
Domains
36
Lj0g3v0320079.1
– Chromatin remodeling complex subunit [Medicago truncatula] gi|357463633|ref|XP_003602098.1|
Domains
9
Lj1g3v0050930.1
– PREDICTED: upstream activation factor subunit UAF30-like [Cicer arietinum] gi|502158846|ref|XP_004511300.1|
Domains
14
Lj1g3v3357590.1
– Flavonol synthase/flavanone 3-hydroxylase [Medicago truncatula] gi|357467443|ref|XP_003604006.1|
Domains
35
Lj1g3v3357590.2
– Flavonol synthase/flavanone 3-hydroxylase [Medicago truncatula] gi|357467443|ref|XP_003604006.1|
Domains
34
Lj2g3v0547900.1
– Zinc finger CCCH domain-containing protein [Medicago truncatula] gi|357498959|ref|XP_003619768.1|
Domains
20
Lj2g3v0547900.2
– Zinc finger CCCH domain-containing protein [Medicago truncatula] gi|357498959|ref|XP_003619768.1|
Domains
20
Lj2g3v1560810.1
– PREDICTED: upstream activation factor subunit UAF30-like [Glycine max] gi|356496496|ref|XP_003517103.1|
Domains
6
Lj2g3v1831970.1
– PREDICTED: upstream activation factor subunit spp27-like isoform 1 [Glycine max] gi|356496858|ref|XP_003517282.1|
Domains
14
Lj2g3v2538590.1
– Upstream activation factor subunit UAF30 [Medicago truncatula] gi|357459823|ref|XP_003600192.1|
Domains
13
Lj3g3v0462070.1
– PREDICTED: eukaryotic translation initiation factor 2D-like [Glycine max] gi|356544210|ref|XP_003540547.1|
Domains
18
Lj4g3v0120100.1
– PREDICTED: upstream activation factor subunit UAF30-like [Fragaria vesca subsp]. vesca] gi|470115751|ref|XP_004294055.1|
Domains
14
Lj4g3v0120100.2
– SWIB complex BAF60b domain-containing protein [Arabidopsis thaliana] gi|18415906|ref|NP_567661.1|
Domains
14
Lj4g3v1388320.1
– PREDICTED: SWI/SNF complex component SNF12 homolog [Cicer arietinum] gi|502176194|ref|XP_004515819.1|
Domains
10
Lj6g3v0365860.3
– Zinc finger CCCH domain-containing protein [Medicago truncatula] gi|357460663|ref|XP_003600613.1|
Domains
20
Lj6g3v0815560.1
– Upstream activation factor subunit UAF30 [Medicago truncatula] gi|357459823|ref|XP_003600192.1|
Domains
13
Lj6g3v0820200.1
– PREDICTED: upstream activation factor subunit UAF30-like [Fragaria vesca subsp]. vesca] gi|470119496|ref|XP_004295850.1|
Domains
8
LotjaGi1g1v0238200.1
– SWI/SNF complex component SNF12 like; TAIR: AT5G14170.1 SWIB/MDM2 domain superfamily protein; Swiss-Prot: sp|Q9FMT4|SNF12_ARATH SWI/SNF complex component SNF12 homolog; TrEMBL-Plants: tr|G7J5J5|G7J5J5_MEDTR Chromatin remodeling complex subunit; Found in the gene: LotjaGi1g1v0238200
Domains
11
LotjaGi1g1v0238200.2
– SWI/SNF complex component SNF12 like; TAIR: AT5G14170.1 SWIB/MDM2 domain superfamily protein; Swiss-Prot: sp|Q9FMT4|SNF12_ARATH SWI/SNF complex component SNF12 homolog; TrEMBL-Plants: tr|G7J5J5|G7J5J5_MEDTR Chromatin remodeling complex subunit; Found in the gene: LotjaGi1g1v0238200
Domains
11
LotjaGi1g1v0563100.2
– Zinc finger CCCH domain protein; TAIR: AT2G16485.2 GW repeat- and PHD finger-containing protein NERD; Swiss-Prot: sp|Q9SIV5|C3H19_ARATH Zinc finger CCCH domain-containing protein 19; TrEMBL-Plants: tr|A0A0B2RGJ5|A0A0B2RGJ5_GLYSO Zinc finger CCCH domain-containing protein 44; Found in the gene: LotjaGi1g1v0563100
Domains
40
LotjaGi1g1v0563100.3
– Zinc finger CCCH domain protein; TAIR: AT2G16485.1 GW repeat- and PHD finger-containing protein NERD; Swiss-Prot: sp|Q9SIV5|C3H19_ARATH Zinc finger CCCH domain-containing protein 19; TrEMBL-Plants: tr|A0A151TCZ6|A0A151TCZ6_CAJCA Zinc finger CCCH domain-containing protein 44; Found in the gene: LotjaGi1g1v0563100
Domains
18
LotjaGi1g1v0784500.1
– Zinc finger CCCH domain protein; TAIR: AT5G08430.2 SWIB/MDM2 and Plus-3 and GYF domain-containing protein; Swiss-Prot: sp|Q9FT92|Y5843_ARATH Uncharacterized protein At5g08430; TrEMBL-Plants: tr|K7KGZ1|K7KGZ1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0784500
Domains
28
LotjaGi2g1v0087800.1
– SWI/SNF complex component SNF12 like; TAIR: AT5G14170.1 SWIB/MDM2 domain superfamily protein; Swiss-Prot: sp|Q9FMT4|SNF12_ARATH SWI/SNF complex component SNF12 homolog; TrEMBL-Plants: tr|K7KP05|K7KP05_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0087800
Domains
11
LotjaGi2g1v0168800_LC.1
– Zinc finger CCCH domain protein; TAIR: AT5G08430.1 SWIB/MDM2 and Plus-3 and GYF domain-containing protein; Swiss-Prot: sp|Q9FT92|Y5843_ARATH Uncharacterized protein At5g08430; TrEMBL-Plants: tr|V7C2T6|V7C2T6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0168800_LC
Domains
25
LotjaGi2g1v0168800_LC.2
– Zinc finger CCCH domain protein; TAIR: AT5G08430.1 SWIB/MDM2 and Plus-3 and GYF domain-containing protein; Swiss-Prot: sp|Q9FT92|Y5843_ARATH Uncharacterized protein At5g08430; TrEMBL-Plants: tr|V7C2T6|V7C2T6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0168800_LC
Domains
25
LotjaGi2g1v0349400.1
– Upstream activation factor subunit spp27; TAIR: AT2G35605.1 SWIB/MDM2 domain superfamily protein; Swiss-Prot: sp|Q9SIV5|C3H19_ARATH Zinc finger CCCH domain-containing protein 19; TrEMBL-Plants: tr|I3SIS2|I3SIS2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0349400
Domains
9
LotjaGi2g1v0349400.2
– Upstream activation factor subunit spp27; TAIR: AT2G35605.1 SWIB/MDM2 domain superfamily protein; Swiss-Prot: sp|Q9SIV5|C3H19_ARATH Zinc finger CCCH domain-containing protein 19; TrEMBL-Plants: tr|I3SIS2|I3SIS2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0349400
Domains
9
LotjaGi2g1v0349400.3
– Upstream activation factor subunit spp27; TAIR: AT2G35605.1 SWIB/MDM2 domain superfamily protein; Swiss-Prot: sp|Q08747|UAF30_YEAST Upstream activation factor subunit UAF30; TrEMBL-Plants: tr|I1LIF9|I1LIF9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0349400
Domains
17
LotjaGi2g1v0384000.1
– Zinc finger CCCH domain protein; TAIR: AT3G51120.1 zinc finger CCCH domain-containing protein 44; Swiss-Prot: sp|Q9SD34|C3H44_ARATH Zinc finger CCCH domain-containing protein 44; TrEMBL-Plants: tr|G7KGD4|G7KGD4_MEDTR Zinc finger CCCH domain protein; Found in the gene: LotjaGi2g1v0384000
Domains
41
LotjaGi2g1v0398300.1
– Upstream activation factor subunit spp27; TAIR: AT3G19080.1 SWIB complex BAF60b domain-containing protein; Swiss-Prot: sp|O74503|UAF30_SCHPO Upstream activation factor subunit spp27; TrEMBL-Plants: tr|I1J943|I1J943_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0398300
Domains
14
LotjaGi2g1v0460900.1
– Upstream activation factor subunit spp27; TAIR: AT2G14880.1 SWIB/MDM2 domain superfamily protein; Swiss-Prot: sp|O74503|UAF30_SCHPO Upstream activation factor subunit spp27; TrEMBL-Plants: tr|I3TA97|I3TA97_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0460900
Domains
16
LotjaGi4g1v0008600.1
– Upstream activation factor subunit spp27; TAIR: AT4G22360.1 SWIB complex BAF60b domain-containing protein; Swiss-Prot: sp|O74503|UAF30_SCHPO Upstream activation factor subunit spp27; TrEMBL-Plants: tr|I1MR08|I1MR08_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0008600
Domains
14
LotjaGi4g1v0008600.2
– Upstream activation factor subunit spp27; TAIR: AT4G22360.1 SWIB complex BAF60b domain-containing protein; Swiss-Prot: sp|O74503|UAF30_SCHPO Upstream activation factor subunit spp27; TrEMBL-Plants: tr|I1MR08|I1MR08_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0008600
Domains
13
LotjaGi4g1v0222400.1
– SWI/SNF complex component SNF12 like; TAIR: AT5G14170.1 SWIB/MDM2 domain superfamily protein; Swiss-Prot: sp|Q9FMT4|SNF12_ARATH SWI/SNF complex component SNF12 homolog; TrEMBL-Plants: tr|A0A1J7HXV2|A0A1J7HXV2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0222400
Domains
12
LotjaGi6g1v0050200.1
– Zinc finger CCCH domain protein; TAIR: AT5G63700.1 zinc ion binding / DNA binding protein; Swiss-Prot: sp|Q9FT92|Y5843_ARATH Uncharacterized protein At5g08430; TrEMBL-Plants: tr|K7LRF3|K7LRF3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0050200
Domains
28
LotjaGi6g1v0050400.1
– Zinc finger CCCH domain protein; TAIR: AT5G63700.1 zinc ion binding / DNA binding protein; Swiss-Prot: sp|Q9FT92|Y5843_ARATH Uncharacterized protein At5g08430; TrEMBL-Plants: tr|K7LRE8|K7LRE8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0050400
Domains
24
LotjaGi6g1v0151600.1
– Upstream activation factor subunit spp27; TAIR: AT4G22360.1 SWIB complex BAF60b domain-containing protein; Swiss-Prot: sp|O74503|UAF30_SCHPO Upstream activation factor subunit spp27; TrEMBL-Plants: tr|I1KYE8|I1KYE8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0151600
Domains
13
LotjaGi6g1v0154300.1
– Upstream activation factor subunit spp27; TAIR: AT4G26810.1 SWIB/MDM2 domain superfamily protein; Swiss-Prot: sp|Q08747|UAF30_YEAST Upstream activation factor subunit UAF30; TrEMBL-Plants: tr|A0A1J7HL65|A0A1J7HL65_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0154300
Domains
10

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd10567 CDD 1 2.50